| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5808703 = | 46 (0.850) | 4 (0.080) | 3/250 | NT | 8.9% | coding (586/1269 nt) | maeB | malic enzyme B |
| ? | NC_002947 | 5808753 = | 38 (0.750) | coding (536/1269 nt) | maeB | malic enzyme B | |||||
GAAATCGCCGGCAAGAAACTGGAAGAAGCCAAGATCGTCTGCCTGGGCGCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5808757‑5808703‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcgATTTCCAGGGCGTTGATCATGCCAGCGGCAGTCACGATGGCAGTACCGTGCTGGTCATCGTGGAACACCGGGATGTCGCACTGTTCGATCAGGGTACGTTCGATTTCAAAGCACTCAGGTGCCTTGATGTCTTCAAGGTTGATGC > NC_002947/5808753‑5808897 GAAATCGCCGGCAAGAAACTGGAAGAAGCCAAGATCGTCTGCCTGGGCGCCGGCGATTTCCAGGGCGTTGATCATGCCAGCGGCAGTCACGATGGCAGTACCGTGCTGGTCATCGTGGAACACCGGGATGTCGCACTGTTCGATCAGGG > 2:119146/1‑149 TCGCCGGCAAGAAACTGGAAGAAGCCAAGATCGTCTGCCTGGGCGCCGGCGATTTCCAGGGCGTTGATCATGCCAGCGGCAGTCACGATGGCAGTACCGTGCTGGTCATCGTGGAACACCGGGATGTCGCACTGTTCGATCAGGGTACG > 6:47021/1‑149 TCGCCGGCAAGAAACTGGAAGAAGCCAAGATCGTCTGCCTGGGCGCCGGCGATTTCCAGGGCGTTGATCATGCCAGCGGCAGTCACGATGGCAGTACCGTGCTGGTCATCGTGGAACACCGGGATGTCGCACTGTTCGATCAGGGTACG > 7:17561/1‑149 GCCGGCAAGAAACTGGAAGAAGCCAAGATCGTCTGCCTGGGCGCCGGCGATTTCCAGGGCGTTGATCATGCCAGCGGCAGTCACGATGGCAGTACCGTGCTGGTCATCGTGGAACACCGGGATGTCGCACTGTTCGATCAGGGTACGTT < 8:17561/149‑1 CCGGCGATTTCCAGGGCGTTGATCATGCCAGCGGCAGTCACGATGGCAGTACCGTGCTGGTCATCGTGGAACACCGGGATGTCGCACTGTTCGATCAGGGTACGTTCGATTTCAAAGCACTCAGGTGCCTTGATGTCTTCAAGGTTGA < 3:179481/148‑1 CCGGCGATTTCCAGGGCGTTGATCATGCCAGCGGCAGTCACGATGGCAGTACCGTGCTGGTCATCGTGGAACACCGGGATGTCGCACTGTTCGATCAGGGTACGTTCGATTTCAAAGCACTCAGGTGCCTTGATGTCTTCAAGGTTGA < 7:260236/148‑1 CCGGCGATTTCCAGGGCGTTGATCATGCCAGCGGCAGTCACGATGGCAGTACCGTGCTGGTCATCGTGGAACACCGGGATGTCGCACTGTTCGATCAGGGTACGTTCGAT < 7:137840/110‑1 CCGGCGATTTCCAGGGCGTTGATCATGCCAGCGGCAGTCACGATGGCAGTACCGTGCTGGTCATCGTGGAACACCGGGATGTCGCACTGTTCGATCAGGGTACGTTCGAT > 8:137840/1‑110 CCGGCGATTTCCAGGGCGTTGATCATGCCAGCGGCAGACACGATGGCAGTACCGTGCTGGTCATCGTGGAACACCGGGATGTCGCACTGTTCGATCAGGGTACGTTCGATTTCAAAGCACTCAGGTGCCTTGATGTCTTCAAGGTTGA < 2:125729/148‑1 CGGCGATTTCCAGGGCGTTGATCATGCCAGCGGCAGTCACGATGGCAGTACCGTGCTGGTCATCGTGGAACACCGGGATGTCGCACTGTTCGATCAGGGTACGTTCGATTTCAAAGCACTCAGGTGCCTTGATGTCTTCAAGGTTGATG > 6:62236/1‑149 GGCGATTTCCAGGGCGTTGATCATGCCAGCGGCAGTCACGATGGCAGTACCGTGCTGGTCATCGTGGAACACCGGGATGTCGCACTGTTCGATCAGGGTACGTTCGATTTCAAAGCACTCAGGTGCCTTGATGTCTTCAAGGTTGATGC < 7:23173/149‑1 GAAATCGCCGGCAAGAAACTGGAAGAAGCCAAGATCGTCTGCCTGGGCGCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5808757‑5808703‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcgATTTCCAGGGCGTTGATCATGCCAGCGGCAGTCACGATGGCAGTACCGTGCTGGTCATCGTGGAACACCGGGATGTCGCACTGTTCGATCAGGGTACGTTCGATTTCAAAGCACTCAGGTGCCTTGATGTCTTCAAGGTTGATGC > NC_002947/5808753‑5808897 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |