New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1095604 =	58 (1.080)	4 (0.080)	4/250	NT	6.7%	coding (457/1494 nt)	rpoN	RNA polymerase sigma‑54 factor
	?	NC_002947	1095665 =	56 (1.100)					coding (396/1494 nt)	rpoN	RNA polymerase sigma‑54 factor

ATGCGGTGCAGTACCGCTTCGACCTCGTCCAGTTCGATATCCAGCTCCGGGTCGAAACCGGCGCAGATTTCTTCGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTGGCGCTGGTCTGGTAGATGTCTTCCCAAGCGGTATCGA  >  NC_002947/1095456‑1095750                                                                                                                                                     |                                                                                                                                                    cgtcagcgccgacaacctggaagacggtgagtggagcgagcgcatccccaacgagctcccggtcgataccgcttgggaagacatctaccagaccagcgccagcagcctgccgagcaacgatgacgacgaatgggacttcaccacgcgca                                                                                                                                                     <  8:67572‑M1/1‑1 (MQ=255) cgtcagcgccgacaacctggaagacggtgagtggagcgagcgcatccccaacgagctcccggtcgataccgcttgggaagacatctaccagaccagcgccagcagcctgccgagcaacgatgacgacgaatgggacttcaccacgcgca                                                                                                                                                     <  3:321550‑M1/1‑1 (MQ=255)  tGCGGTGCAGTACCGCTTCGACCTCGTCCAGTTCGATATCCAGCTCCGGGTCGAAACCGGCGCAGATTTCTTCGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGa                                                                                                                                                     >  3:12718/1‑148 (MQ=255)   tcagcgccgacaacctggaagacggtgagtggagcgagcgcatccccaacgagctcccggtcgataccgcttgggaagacatctaccagaccagcgccagcagcctgccgagcaacgatgacgacgaatgggacttcaccacgcgcaca                                                                                                                                                   <  3:327201‑M1/3‑1 (MQ=255)      gcgccgacaacctggaagacggtgagtggagcgagcgcatccccaacgagctcccggtcgataccgcttgggaagacatctaccagaccagcgccagcagcctgccgagcaacgatgacgacgaatgggacttcaccacgcgcACATCg                                                                                                                                                >  5:66883‑M1/144‑149 (MQ=255)            tACCGCTTCGACCTCGTCCAGTTCGATATCCAGCTCCGGGTCGAAACCGGCGCAGATTTCTTCGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGc                                                                                                                                            >  8:84755/1‑147 (MQ=255)              ccGCTTCGACCTCGTCCAGTTCGATATCCAGCTCCGGGTCGAAACCGGCGCAGATTTCTTCGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAgg                                                                                                                                        >  1:32311/1‑149 (MQ=255)                      aCCTCGTCCAGTTCGATATCCAGCTCCGGGTCGAAACCGGCGCAGATTTCTTCGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTg                                                                                                                               >  4:321550/1‑149 (MQ=255)                               aGTTCGATATCCAGCTCCGGGTCGAAACCGGCGCAGATTTCTTCGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCAcagcag                                                                                                                      >  3:215890/1‑149 (MQ=255)                                tggagcgagcgcatccccaacgagctcccggtcgataccgcttgggaagacatctaccagaccagcgccagcagcctgccgagcaacgatgacgacgaatgggacttcaccacgcgcACATCGGTGCCAGGT‑TCAACTGCCACAGCAgg                                                                                                                     <  6:295119‑M1/32‑1 (MQ=255)                                 ttCGATATCCAGCTCCGGGTCGAAACCGGCGCAGATTTCTTCGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGc                                                                                                                              >  8:312975/1‑139 (MQ=255)                                 ttCGATATCCAGCTCCGGGTCGAAACCGGCGCAGATTTCTTCGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGc                                                                                                                              <  7:312975/139‑1 (MQ=255)                                   cGATATCCAGCTCCGGGTCGAAACCGGCGCAGATTTCTTCGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGGGCCAGGT‑TCTACTGCCAGAGCAGGTgg                                                                                                                  >  5:41086/1‑149 (MQ=255)                                        tCCAGCTCGGGGGCGCAACCGTCGCAGATGTCTTCGAGTGGGGCTTCCAGGGAGCCCTGGCCGTTGATGCTGTCGATCCTGGGCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTg                                                                                                             <  1:242850/149‑1 (MQ=255)                                         ccAGCTCCGGGTCGAAACCGGCGCAGATTTCTTCGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTg                                                                                                             >  3:296060/1‑148 (MQ=255)                                         ccAGCTCCGGGTCGAAACCGGCGCAGATTTCTTCGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTg                                                                                                             >  6:202262/1‑148 (MQ=255)                                             cTCCGGGTCGAAACCGGCGCAGATTTCTTCGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGt                                                                                                                    >  6:309407/1‑137 (MQ=255)                                             cTCCGGGTCGAAACCGGCGCAGATTTCTTCGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGt                                                                                                                    <  5:309407/137‑1 (MQ=255)                                                cGGGTCGAAACCGGCGCAGATTTCTTCGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTg                                                                                                             <  2:115790/141‑1 (MQ=255)                                                cGGGTCGAAACCGGCGCAGATTTCTTCGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTg                                                                                                             >  1:115790/1‑141 (MQ=255)                                                 gggTCGAAACCGGCGCAGATTTCTTCGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTc                                                                                                    <  7:84755/149‑1 (MQ=255)                                                   gTCGAAACCGGCGCAGATTTCTTCGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCgc                                                                                                  <  2:230089/149‑1 (MQ=255)                                                   gTCGAAACCGGCGCAGATTTCTTCGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCgc                                                                                                  <  5:202262/149‑1 (MQ=255)                                                        aaCCGGCGCAGATTTCTTCGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCTATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCgccggcc                                                                                             <  2:218935/149‑1 (MQ=255)                                                            cggtcgataccgcttgggaagacatctaccagaccagcgccagcagcctgccgagcaacgatgacgacgaatgggacttcaccacgcgcACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGAtg                                                                                         <  6:345124‑M1/60‑1 (MQ=255)                                                               tcgataccgcttgggaagacatctaccagaccagcgccagcagcctgccgagcaacgatgacgacgaatgggacttcaccacgcgcACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTgc                                                                                      >  5:295119‑M1/87‑149 (MQ=255)                                                                 gataccgcttgggaagacatctaccagaccagcgccagcagcctgccgagcaacgatgacgacgaatgggacttcaccacgcgcACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTgcgc                                                                                    >  5:345124‑M1/85‑149 (MQ=255)                                                                        ttcGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCCGACATCGGTGCAAGGT‑TCAAATGCCACAGCAGGTGGGTTTGCAGGCTTTCGCCGGCCGATTTCCGCgtggtg                                                                              >  8:54583/1‑148 (MQ=255)                                                                          cGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGaa                                                                            <  4:215890/148‑1 (MQ=255)                                                                           gAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGt                                                                          >  4:277938/1‑149 (MQ=255)                                                                                    ttCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAg                                                                           <  1:204888/139‑1 (MQ=255)                                                                                    ttCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAg                                                                           >  2:204888/1‑139 (MQ=255)                                                                                    ttCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATtcgt                                                                 >  5:49951/1‑149 (MQ=255)                                                                                    ttCCAGGTAGCCCT‑GCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATtcgtc                                                                >  4:152013/1‑149 (MQ=255)                                                                                      ccAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATtcgtcg                                                               >  1:326049/1‑149 (MQ=255)                                                                                       cAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTgc                                                                                      <  5:204166/125‑1 (MQ=255)                                                                                       cAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTgc                                                                                      >  6:204166/1‑125 (MQ=255)                                                                                         ggTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCa                                                            <  5:311472/149‑1 (MQ=255)                                                                                             gCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATtcgt                                                                 >  6:54989/1‑140 (MQ=255)                                                                                             gCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATtcgt                                                                 <  5:54989/140‑1 (MQ=255)                                                                                                 tGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTg                                                      >  5:148849/1‑147 (MQ=255)                                                                                                 tGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTg                                                      <  6:148849/147‑1 (MQ=255)                                                                                                   gCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTc                                                   <  4:296060/148‑1 (MQ=255)                                                                                                      gTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCgg                                                 >  7:188645/1‑147 (MQ=255)                                                                                                      gTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCa                                               <  7:54583/149‑1 (MQ=255)                                                                                                      gTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCa                                               <  6:49951/149‑1 (MQ=255)                                                                                                          aTGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGgct                                           >  7:182475/1‑149 (MQ=255)                                                                                                               gTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGTGTCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGctgctg                                       >  1:259338/1‑149 (MQ=255)                                                                                                               gTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTgg                                      >  7:206382/1‑149 (MQ=255)                                                                                                                  gATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTc                                                   >  4:281078/1‑133 (MQ=255)                                                                                                                  gATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTGgcg                                    <  2:32311/148‑1 (MQ=255)                                                                                                                   aTCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTGGCGct                                  >  5:319295/1‑149 (MQ=255)                                                                                                                       gggTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTGGCGctggtc                              >  6:94142/1‑149 (MQ=255)                                                                                                                        ggTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTGgcgc                                   <  3:130682/143‑1 (MQ=255)                                                                                                                        ggTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTGgcgc                                   >  4:130682/1‑143 (MQ=255)                                                                                                                        ggTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTGGCGctggtct                             >  7:66899/1‑149 (MQ=255)                                                                                                                        ggTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTGGCGctggtct                             <  4:12718/149‑1 (MQ=255)                                                                                                                         gTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTGGCGctggtctg                            >  1:200442/1‑149 (MQ=255)                                                                                                                          tCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTGGCGctggtctgg                           <  8:206382/149‑1 (MQ=255)                                                                                                                          tCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTGGCGctggtctgg                           <  3:277938/149‑1 (MQ=255)                                                                                                                              ggCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTGGCGctggtctgg                           >  3:92452/1‑145 (MQ=255)                                                                                                                                 aaTCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTGGCGCTGGTCTGGTAGATGt                    <  5:94142/149‑1 (MQ=255)                                                                                                                                     aaGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTGGCGCTGGTCTGGTAGATGTCTTc                <  2:200442/149‑1 (MQ=255)                                                                                                                                      aGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTGGCGCTGGTCTGGTAGATGTCTTcc               >  2:310550/1‑149 (MQ=255)                                                                                                                                         ggtcggtGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGTTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTGGCGCTGGTCTGGTAGATGTCTTCCCaa            <  8:182475/149‑1 (MQ=255)                                                                                                                                          gtcggtGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTGGCGCTGGTCTGGTa                         >  7:233034/1‑135 (MQ=255)                                                                                                                                          gtcggtGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTGGCGCTGGTCTGGTa                         <  8:233034/135‑1 (MQ=255)                                                                                                                                                   ggACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTGGCGCTGGTCTGGTAGATGTCTTCCCAAGCGGTATCGa  >  7:67572/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                    ATGCGGTGCAGTACCGCTTCGACCTCGTCCAGTTCGATATCCAGCTCCGGGTCGAAACCGGCGCAGATTTCTTCGAGTGTGTCTTCCAGGTAGCCCTGGCCGTTGATGCTGTCGATCAGGGTCACGGCAATCAAGCGGTCGGTGTCGGACATCGGTGCCAGGT‑TCAACTGCCACAGCAGGTGGCTTTGCAGGCTTTCGCCGGCCGATGTGCGCGTGGTGAAGTCCCATTCGTCGTCATCGTTGCTCGGCAGGCTGCTGGCGCTGGTCTGGTAGATGTCTTCCCAAGCGGTATCGA  >  NC_002947/1095456‑1095750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.