New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1404387	60 (1.110)	4 (0.080)	4/258	NT	6.6%	coding (1295/2067 nt)	PP_1228	methyl‑accepting chemotaxis transducer
	?	NC_002947	= 1404422	54 (1.030)					coding (1260/2067 nt)	PP_1228	methyl‑accepting chemotaxis transducer

CCTGATCCGCGGCGCGTGCGGCCTGGGCCGCCTGCGATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCTGGTGGGCGTAGTCCAGGC  >  NC_002947/1404247‑1404534                                                                                                                                             |                                                                                                                                                     ccTGATCCGCGGCGCGTGCGGCCTGGGCCGCCTGCGATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATg                                                                                                                                              <  5:186568/149‑1 (MQ=255) ccTGATCCGCGGCGCGTGCGGCCTGGGCCGCCTGCGATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATg                                                                                                                                              <  5:12892/149‑1 (MQ=255)       ccGCGGCGCGTGCGGCCTGGGCCGCCTGCGATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATggcgg‑c                                                                                                                                        <  8:131344/148‑1 (MQ=255)         gcggcgCGTGCGGCCTGGGCCGCCTGCGATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCccgcaataccgccgac                                                                                                                                      >  4:269559‑M1/1‑133 (MQ=255)           ggcgCGTGCGGCCTGGGCCGCCGGCGATGCGTTGTGGGCGTCATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGAtt                                                                                                                                   <  8:189001/149‑1 (MQ=255)            gcgcGTGCGGCCTGGGCCGCCTGCGATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTg                                                                                                                                  <  8:91627/149‑1 (MQ=255)              gcgTGCGGCCTGGGCCGCCTGCGATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGt                                                                                                                                <  1:319991/149‑1 (MQ=255)                     gCCTGGGCCGCCTGCGATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATgg                                                                                                                                             <  8:289113/130‑1 (MQ=255)                       cTGGGCCGCCTGCGATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTAt                                                                                                                       <  1:312456/149‑1 (MQ=255)                          ggCCGCCTGCGATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTAtt                                                                                                                      <  7:152625/147‑1 (MQ=255)                           gccgccTGCGATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCTATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCg                                                                                                                   <  1:135842/149‑1 (MQ=255)                            ccgccTGCGATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCgg                                                                                                                  <  6:322356/149‑1 (MQ=255)                                  gCGATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCccgcaataccgccgaccaatcggccgccattgccagccaga                                                                                                             <  3:269559‑M1/149‑42 (MQ=255)                                  gCGATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCccgcaataccgccgaccaatcggccgccattgccagccaga                                                                                                             >  1:249062‑M1/1‑108 (MQ=255)                                   cGATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGcctc                                                                                                             <  3:67896/147‑1 (MQ=255)                                    gATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCccgcaataccgccgaccaatcggccgccattgccagccagacc                                                                                                           <  2:249062‑M1/149‑44 (MQ=255)                                          ttGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGc                                                                                                      >  4:36208/1‑147 (MQ=255)                                             tgGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CGGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGcc                                                                                                 >  2:173581/1‑149 (MQ=255)                                             tgGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGcc                                                                                                 >  1:300730/1‑149 (MQ=255)                                                gCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCg                                                                                                                   <  2:167041/128‑1 (MQ=255)                                                gCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCg                                                                                                                   >  1:167041/1‑128 (MQ=255)                                                gCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCAACTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCttt                                                                                              >  4:298293/1‑149 (MQ=255)                                                   aCATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGAc                                                                                           <  2:259546/149‑1 (MQ=255)                                                      tCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTg                                                                                        >  1:200640/1‑149 (MQ=255)                                                       ccAGGGCGGTGGCGCTCATTTCGTTGGCAGGTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGGAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCtt                                                                                               <  6:37980/141‑1 (MQ=255)                                                       ccAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCtt                                                                                               >  5:37980/1‑141 (MQ=255)                                                       ccAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTgg                                                                                       >  7:132312/1‑149 (MQ=255)                                                       ccAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTgg                                                                                       >  6:178861/1‑149 (MQ=255)                                                        gaGGGCGGTGGGGCTCATTTCGGTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTggg                                                                                      <  1:47365/148‑1 (MQ=255)                                                         aGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTggg                                                                                      >  2:266288/1‑148 (MQ=255)                                                            gCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATGTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAAt                                                                                  <  3:171475/149‑1 (MQ=255)                                                                        aTTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCaa                                                                      >  3:251575/1‑149 (MQ=255)                                                                                 gCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTc                                                                >  3:271218/1‑146 (MQ=255)                                                                                 gCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGa                                                              <  2:200640/148‑1 (MQ=255)                                                                                 gCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGa                                                              <  4:271218/148‑1 (MQ=255)                                                                                   aGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACtt                                                                   >  4:224952/1‑141 (MQ=255)                                                                                   aGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACtt                                                                   <  3:224952/141‑1 (MQ=255)                                                                                         aGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACgg                                                      <  1:266288/148‑1 (MQ=255)                                                                                          gCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGa                                                              <  1:128090/139‑1 (MQ=255)                                                                                          gCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGa                                                              >  2:128090/1‑139 (MQ=255)                                                                                          gCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGtt                                                    <  6:110045/149‑1 (MQ=255)                                                                                          gCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGtt                                                    <  3:304482/149‑1 (MQ=255)                                                                                                tGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGaaa                                                         >  8:271006/1‑138 (MQ=255)                                                                                                tGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGaaa                                                         <  7:271006/138‑1 (MQ=255)                                                                                                 gTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAg                                             >  2:166451/1‑149 (MQ=255)                                                                                                  ttCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGc                                            <  1:166451/149‑1 (MQ=255)                                                                                                   tCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGcctcc                                                                                                            <  7:300842/84‑1 (MQ=255)                                                                                                   tCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGcctac                                                                                                            >  8:300842/1‑82 (MQ=255)                                                                                                     gATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCgg                                         >  2:47587/1‑149 (MQ=255)                                                                                                               tGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGcc                               <  7:45576/149‑1 (MQ=255)                                                                                                                 cTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGcc                               >  2:262616/1‑147 (MQ=255)                                                                                                                      gctgcATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACt                                                                    <  8:190787/105‑1 (MQ=255)                                                                                                                          cATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATc                      <  3:298293/147‑1 (MQ=255)                                                                                                                          cATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCt                    <  8:132312/149‑1 (MQ=255)                                                                                                                             gCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGCCCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGcc                                           >  5:77210/1‑123 (MQ=255)                                                                                                                             gCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGACACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCtggt                 >  3:253616/1‑149 (MQ=255)                                                                                                                             gCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGcc                                           <  6:77210/123‑1 (MQ=255)                                                                                                                               cGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCtgtggg               >  4:69028/1‑145 (MQ=255)                                                                                                                                gTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGt                           <  1:229031/136‑1 (MQ=255)                                                                                                                                gTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGt                           >  2:229031/1‑136 (MQ=255)                                                                                                                                  cGCTGGTCTGGCTGGCAATGGCGGTCCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCTGGTGGGc             >  7:48757/1‑149 (MQ=255)                                                                                                                                   gCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCTGGTGGGCg            >  4:270946/1‑148 (MQ=255)                                                                                                                                    cTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGCACCAGCCGGTGAGCTGGCACAGTTCATCCTGGTGGGCTTa          >  5:252493/1‑149 (MQ=255)                                                                                                                                      ggTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGgccagaccagcgacggcatgcagcaacagcatcgcgaaatcgaacaggtggctacagctgccaacgaaatgagcgccaccgccctggatgtcgcccacaacgcatc        <  2:249062‑M2/149‑107 (MQ=255)                                                                                                                                       gTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCTGGTGGGCGTAGTc       <  3:36208/149‑1 (MQ=255)                                                                                                                                        tCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGgccagaccagcgacggcatgcagcaacagcatcgcgaaatcgaacaggtggctacagctgccaacgaaatgagcgccaccgccctggatgtcgcccacaacgcatcgc      >  1:249062‑M2/1‑41 (MQ=255)                                                                                                                                        tCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGgccagaccagcgacggcatgcagcaacagcatcgcgaaatcgaacaggtggctacagctgccaacgaaatgagcgccaccgccctggatgtcgcccacaacgcatcgc      <  3:269559‑M2/149‑109 (MQ=255)                                                                                                                                          tggctggcAATGGCGG‑CCGATTGTTCTGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGAAATGACAGGTTCAAACTTTTCGATGAAACGTTTGAACCCTACAGATCGCTGTCCCAGATCAACCTGGTGGACGTAgacaag    >  8:296397/1‑144 (MQ=255)                                                                                                                                            gctggcAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCTGGTGGGCGTAGTCCAGGc  <  5:178861/149‑1 (MQ=255)                                                                                                                                             |                                                                                                                                                     CCTGATCCGCGGCGCGTGCGGCCTGGGCCGCCTGCGATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCTGGTGGGCGTAGTCCAGGC  >  NC_002947/1404247‑1404534

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.