New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1404387	60 (1.110)	4 (0.080)	4/258	NT	6.6%	coding (1295/2067 nt)	PP_1228	methyl‑accepting chemotaxis transducer
	?	NC_002947	= 1404422	54 (1.030)					coding (1260/2067 nt)	PP_1228	methyl‑accepting chemotaxis transducer

CCGCCTGCGATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCTGGTGGGCGTAGTCCAGGCGACGGGTAAGGTCGCCTTCGCCACTGGCAATGT  >  NC_002947/1404274‑1404567                                                                                                                                                      |                                                                                                                                                  ccgccTGCGATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCgg                                                                                                                                                   <  6:322356/149‑1 (MQ=255)        cGATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGcctc                                                                                                                                              <  3:67896/147‑1 (MQ=255)               ttGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGc                                                                                                                                       >  4:36208/1‑147 (MQ=255)                  tgGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CGGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGcc                                                                                                                                  >  2:173581/1‑149 (MQ=255)                  tgGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGcc                                                                                                                                  >  1:300730/1‑149 (MQ=255)                     gCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCAACTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCttt                                                                                                                               >  4:298293/1‑149 (MQ=255)                        aCATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGAc                                                                                                                            <  2:259546/149‑1 (MQ=255)                           tCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTg                                                                                                                         >  1:200640/1‑149 (MQ=255)                            ccAGGGCGGTGGCGCTCATTTCGTTGGCAGGTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGGAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCtt                                                                                                                                <  6:37980/141‑1 (MQ=255)                            ccAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCtt                                                                                                                                >  5:37980/1‑141 (MQ=255)                            ccAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTgg                                                                                                                        >  6:178861/1‑149 (MQ=255)                            ccAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTgg                                                                                                                        >  7:132312/1‑149 (MQ=255)                             gaGGGCGGTGGGGCTCATTTCGGTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTggg                                                                                                                       <  1:47365/148‑1 (MQ=255)                              aGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTggg                                                                                                                       >  2:266288/1‑148 (MQ=255)                                 gCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATGTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAAt                                                                                                                   <  3:171475/149‑1 (MQ=255)                                             aTTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCaa                                                                                                       >  3:251575/1‑149 (MQ=255)                                                      gCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTc                                                                                                 >  3:271218/1‑146 (MQ=255)                                                      gCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGa                                                                                               <  2:200640/148‑1 (MQ=255)                                                      gCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGa                                                                                               <  4:271218/148‑1 (MQ=255)                                                        aGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACtt                                                                                                    <  3:224952/141‑1 (MQ=255)                                                        aGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACtt                                                                                                    >  4:224952/1‑141 (MQ=255)                                                              aGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACgg                                                                                       <  1:266288/148‑1 (MQ=255)                                                               gCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGa                                                                                               <  1:128090/139‑1 (MQ=255)                                                               gCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGa                                                                                               >  2:128090/1‑139 (MQ=255)                                                               gCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGtt                                                                                     <  6:110045/149‑1 (MQ=255)                                                               gCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGtt                                                                                     <  3:304482/149‑1 (MQ=255)                                                                     tGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGaaa                                                                                          <  7:271006/138‑1 (MQ=255)                                                                     tGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGaaa                                                                                          >  8:271006/1‑138 (MQ=255)                                                                      gTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAg                                                                              >  2:166451/1‑149 (MQ=255)                                                                       ttCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGc                                                                             <  1:166451/149‑1 (MQ=255)                                                                        tCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGcctcc                                                                                                                                             <  7:300842/84‑1 (MQ=255)                                                                        tCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGcctac                                                                                                                                             >  8:300842/1‑82 (MQ=255)                                                                          gATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCgg                                                                          >  2:47587/1‑149 (MQ=255)                                                                                    tGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGcc                                                                <  7:45576/149‑1 (MQ=255)                                                                                      cTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGcc                                                                >  2:262616/1‑147 (MQ=255)                                                                                           gctgcATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACt                                                                                                     <  8:190787/105‑1 (MQ=255)                                                                                               cATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATc                                                       <  3:298293/147‑1 (MQ=255)                                                                                               cATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCt                                                     <  8:132312/149‑1 (MQ=255)                                                                                                  gCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGCCCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGcc                                                                            >  5:77210/1‑123 (MQ=255)                                                                                                  gCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGACACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCtggt                                                  >  3:253616/1‑149 (MQ=255)                                                                                                  gCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGcc                                                                            <  6:77210/123‑1 (MQ=255)                                                                                                    cGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCtgtggg                                                >  4:69028/1‑145 (MQ=255)                                                                                                     gTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGt                                                            >  2:229031/1‑136 (MQ=255)                                                                                                     gTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGt                                                            <  1:229031/136‑1 (MQ=255)                                                                                                       cGCTGGTCTGGCTGGCAATGGCGGTCCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCTGGTGGGc                                              >  7:48757/1‑149 (MQ=255)                                                                                                        gCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCTGGTGGGCg                                             >  4:270946/1‑148 (MQ=255)                                                                                                         cTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGCACCAGCCGGTGAGCTGGCACAGTTCATCCTGGTGGGCTTa                                           >  5:252493/1‑149 (MQ=255)                                                                                                           ggTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGgccagaccagcgacggcatgcagcaacagcatcgcgaaatcgaacaggtggctacagctgccaacgaaatgagcgccaccgccctggatgtcgcccacaacgcatc                                         <  2:249062‑M2/149‑107 (MQ=255)                                                                                                            gTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCTGGTGGGCGTAGTc                                        <  3:36208/149‑1 (MQ=255)                                                                                                             tCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGgccagaccagcgacggcatgcagcaacagcatcgcgaaatcgaacaggtggctacagctgccaacgaaatgagcgccaccgccctggatgtcgcccacaacgcatcgc                                       >  1:249062‑M2/1‑41 (MQ=255)                                                                                                             tCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGgccagaccagcgacggcatgcagcaacagcatcgcgaaatcgaacaggtggctacagctgccaacgaaatgagcgccaccgccctggatgtcgcccacaacgcatcgc                                       <  3:269559‑M2/149‑109 (MQ=255)                                                                                                               tggctggcAATGGCGG‑CCGATTGTTCTGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGAAATGACAGGTTCAAACTTTTCGATGAAACGTTTGAACCCTACAGATCGCTGTCCCAGATCAACCTGGTGGACGTAgacaag                                     >  8:296397/1‑144 (MQ=255)                                                                                                                 gctggcAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCTGGTGGGCGTAGTCCAGGc                                   <  5:178861/149‑1 (MQ=255)                                                                                                                      cAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCTGGTGGGCGTAGTCCAGGCGACgg                              >  2:172370/1‑149 (MQ=255)                                                                                                                             gg‑cCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCtggtgg                                                >  3:79879/1‑124 (MQ=255)                                                                                                                             gg‑cCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCtggtgg                                                <  4:79879/124‑1 (MQ=255)                                                                                                                              g‑cCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCTGGTGGGCGTAGTCCAGGCGACGGGTAAGGTc                      <  7:280331/149‑1 (MQ=255)                                                                                                                                      ggTCGGCGGTATTGCGTGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCTGGTGGGCGTAGTCCAGGCGACGGGTAAGGTCGCCTTc                <  3:270946/148‑1 (MQ=255)                                                                                                                                       gTCGGCGGTATTGCGGgccagaccagcgacggcatgcagcaacagcatcgcgaaatcgaacaggtggctacagctgccaacgaaatgagcgccaccgccctggatgtcgcccacaacgcatcgcaggcggcccaggccgcacgcgccgc              >  4:269559‑M2/1‑16 (MQ=255)                                                                                                                                           gcggTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCTGGTGGGCGTAGTCCAGGCGACGGGTAAGGTCGCCTTCGCCACt          <  4:251575/149‑1 (MQ=255)                                                                                                                                             ggTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCTGGTGGGCGTAGTCCAGGCGACGGGTAAGGTCGCCTTCGCCACTgg        <  1:262616/149‑1 (MQ=255)                                                                                                                                             ggTAATGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCTGGTGGGCGTAGTCCAGGCGACGGGTAAGGTCGCCTTCGCCACTgg        <  1:173581/149‑1 (MQ=255)                                                                                                                                                   gCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCTGGTGGGCGTAGTCCAGGCGACGGGTAAGGTCGCCTTCGCCACTGGCAATGt  >  1:336511/1‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                  CCGCCTGCGATGCGTTGTGGGCGACATCCAGGGCGGTGGCGCTCATTTCGTTGGCAGCTGTAGCCACCTGTTCGATTTCGCGATGCTGTTGCTGCATGCCGTCGCTGGTCTGGCTGGCAATGGCGG‑CCGATTGGTCGGCGGTATTGCGGGCCTCCTGCAGCGAGCCTTTGACCTGGGCAATGACCGGTTGCAACTTGTCGAGGAAACGGTTGAACCAGCCGGTGAGCTGGCCCAGTTCATCCTGGTGGGCGTAGTCCAGGCGACGGGTAAGGTCGCCTTCGCCACTGGCAATGT  >  NC_002947/1404274‑1404567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.