New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2129966 =	68 (1.260)	4 (0.080)	4/248	NT	6.0%	coding (2233/2496 nt)	fimD	type I pili subunit FimD
	?	NC_002947	2130009 =	62 (1.230)					coding (2190/2496 nt)	fimD	type I pili subunit FimD

TGCTCCTGGCTGGGGTTGGTGAGCATTACCAGGCCCGCCTGCCCGACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCA  >  NC_002947/2129818‑2130111                                                                                                                                                     |                                                                                                                                                   gggcctgcaaaacgcaacgggtacgcgcaccaattcacgcggttatgcacttttgccctacctgcaaccgtaccggaccaattcggtggtcctggaaaccgaccgtctcgatcctgatgtggaaatcgacaacggcatcgcccaggtag                                                                                                                                                    >  6:45842‑M1/149‑149 (MQ=255)  ggcctgcaaaacgcaacgggtacgcgcaccaattcacgcggttatgcacttttgccctacctgcaaccgtaccggaccaattcggtggtcctggaaaccgaccgtctcgatcctgatgtggaaatcgacaacggcatcgcccaggtag                                                                                                                                                    >  4:108942‑M1/148‑148 (MQ=255)  ggcctgcaaaacgcaacgggtacgcgcaccaattcacgcggttatgcacttttgccctacctgcaaccgtaccggaccaattcggtggtcctggaaaccgaccgtctcgatcctgatgtggaaatcgacaacggcatcgcccaggtaGt                                                                                                                                                   <  3:55296‑M1/2‑1 (MQ=255)    tCCTGGCTGGGGTTGGTGAGCATTACCAGGCCCGCCTGCCCGACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGc                                                                                                                                                 >  2:42504/1‑149 (MQ=255)     ccTGGCTGGGGTTGGTGAGCATTACCAGGCCCGCCTGCCCGACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGcc                                                                                                                                                >  6:158345/1‑149 (MQ=255)        caaaacgcaacgggtacgcgcaccaattcacgcggttatgcacttttgccctacctgcaaccgtaccggaccaattcggtggtcctggaaaccgaccgtctcgatcctgatgtggaattcgacaacggcatcgcccaggtaGTGCCTc                                                                                                                                              >  1:262297‑M1/142‑148 (MQ=255)         gctggGGTTGGTGAGCATTACCAGGCCCGCCTGCCCGACCATGCCCAGTTGGGTACCGTTAACGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCg                                                                                                                                             >  1:98613/1‑148 (MQ=255)              ggTTGGTGAGCATTACCAGGCCCGCCTGCCCGACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCgg                                                                                                                                       <  1:163712/149‑1 (MQ=255)                   gTGAGCATTACCAGGCCCGCCTGCCCGACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCtt                                                                                                                                  >  2:1386/1‑149 (MQ=255)                    tGAGCATTACCAGGCCCGCCTGCCCGACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCtt                                                                                                                                  >  4:327643/1‑148 (MQ=255)                      aGCATTACCAGGCCCGCCTGCCCGACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGAc                                                                                                                               <  7:295647/149‑1 (MQ=255)                        cATTACCAGGCCCGCCTGCCCGACCATGCCNAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCa                                                                                                                             >  1:31231/1‑149 (MQ=255)                         aTTACCAGGCCCGCCTGCCCGACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCAc                                                                                                                            >  4:25991/1‑149 (MQ=255)                          ttACCAGGCCCGCCTGCCCGACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACt                                                                                                                           >  4:55296/1‑149 (MQ=255)                          ttACCAGGCCCGCCTGCCCGACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACt                                                                                                                           >  5:2266/1‑149 (MQ=255)                          ttACCAGGCCCGCCTGCCCGACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACt                                                                                                                           <  7:69961/149‑1 (MQ=255)                             ccAGGCCCGCCTGCCCGACCATGCCCAGTTGGGTACAGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCa                                                                                                                        >  3:210502/1‑149 (MQ=255)                              cAGGCCCGCCTGCCCGACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCAc                                                                                                                       >  1:251117/1‑149 (MQ=255)                                 gCCCGCCTGCCCGACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCt                                                                                                                    <  2:289921/149‑1 (MQ=255)                                     gCCTGCCCGACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGGCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCg                                                                                                                >  7:296386/1‑149 (MQ=255)                                      ccTGCCCGACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGa                                                                                                               <  2:31231/149‑1 (MQ=255)                                       gcggttatgcacttttgccctacctgcaaccgtaccggaccaattcggtggtcctggaaaccgaccgtctcgatcctgatgtggaaatcgacaacggcatcgcccaggtaGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAg                                                                                                              <  7:248269‑M1/39‑1 (MQ=255)                                       cTGCCCGACCATTCCCAGTTGGGTACCTTTGTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAg                                                                                                              <  2:251117/149‑1 (MQ=255)                                          cccGACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAgg                                                                                                             <  7:22861/147‑1 (MQ=255)                                          cccGACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCa                                                                                                           >  3:317263/1‑149 (MQ=255)                                           ccGACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCAc                                                                                                          >  6:220730/1‑149 (MQ=255)                                             gACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCa                                                                                                                             >  2:114960/1‑128 (MQ=255)                                             gACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCa                                                                                                                             <  1:114960/128‑1 (MQ=255)                                                cacttttgccctacctgcaaccgtaccggaccaattcggtggtcctggaaaccgaccgtctcgatcctgatgtggaaatcgacaacggcatcgcccaggtaGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTAcc                                                                                                      >  8:248269‑M1/102‑148 (MQ=255)                                                    cccAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGc                                                                                                 >  6:285118/1‑149 (MQ=255)                                                       aggtGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGAt                                                                                              <  8:115300/146‑1 (MQ=255)                                                        gTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATg                                                                                             <  5:158345/149‑1 (MQ=255)                                                          ctacctgcaaccgtaccggaccaattcggtggtcctggaaaccgaccgtctcgatcctgatgtggaaatcgacaacggcatcgcccaggtaGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAgg                                                                                                             >  3:72000‑M1/92‑131 (MQ=255)                                                          ctacctgcaaccgtaccggaccaattcggtggtcctggaaaccgaccgtctcgatcctgatgtggaaatcgacaacggcatcgcccaggtaGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAgg                                                                                                             <  4:72000‑M1/40‑1 (MQ=255)                                                           gggTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGcc                                                                                           <  8:31689/148‑1 (MQ=255)                                                             gTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGtt                                                                                        >  8:116175/1‑149 (MQ=255)                                                                  gTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATg                                                                                             <  1:320684/139‑1 (MQ=255)                                                                  gTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATg                                                                                             >  2:320684/1‑139 (MQ=255)                                                                  gTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGa                                                                                   <  3:262243/149‑1 (MQ=255)                                                                   ttCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGAt                                                                                  >  5:71831/1‑149 (MQ=255)                                                                   ttCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGAt                                                                                  <  1:257789/149‑1 (MQ=255)                                                                    tctcGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGAtt                                                                                 >  6:284411/1‑149 (MQ=255)                                                                    tctcGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGAtt                                                                                 >  8:152153/1‑149 (MQ=255)                                                                        ggCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑Cca                                                                            <  3:248147/149‑1 (MQ=255)                                                                          ccAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGAc                                                                                                                               >  6:188095/1‑97 (MQ=255)                                                                          ccAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGAc                                                                                                                               <  5:188095/97‑1 (MQ=255)                                                                          ccAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑Ccaca                                                                          <  3:327643/149‑1 (MQ=255)                                                                          ccAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑Ccaca                                                                          >  7:167785/1‑149 (MQ=255)                                                                             gCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCa                                                                       <  5:220730/149‑1 (MQ=255)                                                                                    ggCCCCAAAGGGCAGCGGTTGACCCTGGGTATCTTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCg                                                                 <  1:257334/148‑1 (MQ=255)                                                                                          aaaGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCtt                                                                                                                                  >  6:329315/1‑78 (MQ=255)                                                                                          aaaGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGAcggt                                                          >  8:55951/1‑149 (MQ=255)                                                                                              ggCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGAcggtcggt                                                      >  6:136042/1‑149 (MQ=255)                                                                                                   cGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCa                                                 <  5:84275/149‑1 (MQ=255)                                                                                                   cGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCa                                                 <  5:284411/149‑1 (MQ=255)                                                                                                   cGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCa                                                 <  5:124342/149‑1 (MQ=255)                                                                                                   cGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCa                                                 <  7:152153/149‑1 (MQ=255)                                                                                                    ggTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAg                                                <  5:285118/149‑1 (MQ=255)                                                                                                     gTTGACCCTGGGTATCGTGCATGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAgg                                               <  7:116175/149‑1 (MQ=255)                                                                                                     gTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCa                                                 <  7:47942/147‑1 (MQ=255)                                                                                                     gTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAgg                                               <  5:136042/149‑1 (MQ=255)                                                                                                     gTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAAACGGTCGGttacaa                                                 >  8:47942/1‑143 (MQ=255)                                                                                                        gACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGac                                             <  2:98613/148‑1 (MQ=255)                                                                                                          cccTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGAcggt                                                          >  5:312198/1‑133 (MQ=255)                                                                                                          cccTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGAcggt                                                          <  6:312198/133‑1 (MQ=255)                                                                                                           ccTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGaccacc                                         >  4:328746/1‑149 (MQ=255)                                                                                                               ggTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAAt                                     >  6:270492/1‑149 (MQ=255)                                                                                                                    tacccAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTc                                <  2:53036/145‑1 (MQ=255)                                                                                                                       tcatggTCAGTACAATGCGTGAAACGCGGGGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTg                                   <  1:65731/140‑1 (MQ=255)                                                                                                                       gCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTg                                   >  2:65731/1‑143 (MQ=255)                                                                                                                               aGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGtt                      <  1:42504/148‑1 (MQ=255)                                                                                                                               aGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGtt                      <  6:71831/148‑1 (MQ=255)                                                                                                                                gTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTg                     >  1:265591/1‑148 (MQ=255)                                                                                                                                 tACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑cc                                                                             <  6:87941/91‑1 (MQ=255)                                                                                                                                 tACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑cc                                                                             >  5:87941/1‑91 (MQ=255)                                                                                                                                       gCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAgg             >  5:334830/1‑149 (MQ=255)                                                                                                                                           gAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCg                                        >  2:86797/1‑118 (MQ=255)                                                                                                                                               cgcgGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGt     <  4:317263/149‑1 (MQ=255)                                                                                                                                                 cggcgTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGc   <  6:334830/149‑1 (MQ=255)                                                                                                                                                  ggcgTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCa  <  7:55951/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   TGCTCCTGGCTGGGGTTGGTGAGCATTACCAGGCCCGCCTGCCCGACCATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCA  >  NC_002947/2129818‑2130111

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.