New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2129966 =	68 (1.260)	4 (0.080)	4/248	NT	6.0%	coding (2233/2496 nt)	fimD	type I pili subunit FimD
	?	NC_002947	2130009 =	62 (1.230)					coding (2190/2496 nt)	fimD	type I pili subunit FimD

CATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCATAACCGCGTGAATTGGTGCGCGTACCCGTTGCGTTTTGCAGGCCCA  >  NC_002947/2129865‑2130157                                                                                                                                                 |                                                                                                                                                      cacttttgccctacctgcaaccgtaccggaccaattcggtggtcctggaaaccgaccgtctcgatcctgatgtggaaatcgacaacggcatcgcccaggtaGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTAcc                                                                                                                                                    >  8:248269‑M1/102‑148 (MQ=255)     cccAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGc                                                                                                                                               >  6:285118/1‑149 (MQ=255)        aggtGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGAt                                                                                                                                            <  8:115300/146‑1 (MQ=255)         gTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATg                                                                                                                                           <  5:158345/149‑1 (MQ=255)            gggTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGcc                                                                                                                                         <  8:31689/148‑1 (MQ=255)              gTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGtt                                                                                                                                      >  8:116175/1‑149 (MQ=255)                   gTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATg                                                                                                                                           <  1:320684/139‑1 (MQ=255)                   gTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATg                                                                                                                                           >  2:320684/1‑139 (MQ=255)                   gTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGa                                                                                                                                 <  3:262243/149‑1 (MQ=255)                    ttCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGAt                                                                                                                                <  1:257789/149‑1 (MQ=255)                    ttCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGAt                                                                                                                                >  5:71831/1‑149 (MQ=255)                     tctcGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGAtt                                                                                                                               >  8:152153/1‑149 (MQ=255)                     tctcGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGAtt                                                                                                                               >  6:284411/1‑149 (MQ=255)                         ggCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑Cca                                                                                                                          <  3:248147/149‑1 (MQ=255)                           ccAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑Ccaca                                                                                                                        >  7:167785/1‑149 (MQ=255)                           ccAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑Ccaca                                                                                                                        <  3:327643/149‑1 (MQ=255)                              gCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCa                                                                                                                     <  5:220730/149‑1 (MQ=255)                                     ggCCCCAAAGGGCAGCGGTTGACCCTGGGTATCTTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCg                                                                                                               <  1:257334/148‑1 (MQ=255)                                           aaaGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGAcggt                                                                                                        >  8:55951/1‑149 (MQ=255)                                               ggCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGAcggtcggt                                                                                                    >  6:136042/1‑149 (MQ=255)                                                    cGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCa                                                                                               <  7:152153/149‑1 (MQ=255)                                                    cGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCa                                                                                               <  5:84275/149‑1 (MQ=255)                                                    cGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCa                                                                                               <  5:284411/149‑1 (MQ=255)                                                    cGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCa                                                                                               <  5:124342/149‑1 (MQ=255)                                                     ggTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAg                                                                                              <  5:285118/149‑1 (MQ=255)                                                      gTTGACCCTGGGTATCGTGCATGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAgg                                                                                             <  7:116175/149‑1 (MQ=255)                                                      gTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCa                                                                                               <  7:47942/147‑1 (MQ=255)                                                      gTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAgg                                                                                             <  5:136042/149‑1 (MQ=255)                                                      gTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAAACGGTCGGttacaa                                                                                               >  8:47942/1‑143 (MQ=255)                                                         gACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGac                                                                                           <  2:98613/148‑1 (MQ=255)                                                           cccTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGAcggt                                                                                                        >  5:312198/1‑133 (MQ=255)                                                           cccTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGAcggt                                                                                                        <  6:312198/133‑1 (MQ=255)                                                            ccTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGaccacc                                                                                       >  4:328746/1‑149 (MQ=255)                                                                ggTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAAt                                                                                   >  6:270492/1‑149 (MQ=255)                                                                     tacccAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTc                                                                              <  2:53036/145‑1 (MQ=255)                                                                        tcatggTCAGTACAATGCGTGAAACGCGGGGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTg                                                                                 <  1:65731/140‑1 (MQ=255)                                                                        gCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTg                                                                                 >  2:65731/1‑143 (MQ=255)                                                                                aGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGtt                                                                    <  6:71831/148‑1 (MQ=255)                                                                                aGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGtt                                                                    <  1:42504/148‑1 (MQ=255)                                                                                 gTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTg                                                                   >  1:265591/1‑148 (MQ=255)                                                                                  tACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑cc                                                                                                                           <  6:87941/91‑1 (MQ=255)                                                                                  tACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑cc                                                                                                                           >  5:87941/1‑91 (MQ=255)                                                                                        gCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAgg                                                           >  5:334830/1‑149 (MQ=255)                                                                                            gAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCg                                                                                      >  2:86797/1‑118 (MQ=255)                                                                                                cgcgGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGt                                                   <  4:317263/149‑1 (MQ=255)                                                                                                  ggtagtgcctcgccagggtgcagtggtcaagcaccgcttcgaggcacTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTg                                                  >  8:248269‑M2/48‑148 (MQ=255)                                                                                                  cggcgTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGc                                                 <  6:334830/149‑1 (MQ=255)                                                                                                   ggcgTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCa                                                <  7:55951/149‑1 (MQ=255)                                                                                                         cctcgccagggtgcagtggtcaagcaccgcttcgaggcacTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAg                                                            >  3:72000‑M2/41‑131 (MQ=255)                                                                                                         cctcgccagggtgcagtggtcaagcaccgcttcgaggcacTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAg                                                            <  4:72000‑M2/91‑1 (MQ=255)                                                                                                          ctcgccagggtgcagtggtcaagcaccgcttcgaggcacTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCATAACcgc                                         <  7:248269‑M2/110‑1 (MQ=255)                                                                                                              cgatcttGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCATAACCGCGTGa                                     <  1:34971/143‑1 (MQ=255)                                                                                                                gCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCa                                                                                               >  4:65081/1‑89 (MQ=255)                                                                                                                gCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCa                                                                                               <  3:65081/89‑1 (MQ=255)                                                                                                                gCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCATAACCGCGTGAAt                                   >  6:114730/1‑149 (MQ=255)                                                                                                                  ggTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCATAACCGCGTGAATTg                                 <  3:25991/149‑1 (MQ=255)                                                                                                                    tGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCATAACCGCGTGAATTGGt                               <  1:1386/149‑1 (MQ=255)                                                                                                                     gCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCATAACCGCGTGa                                     >  2:34971/1‑142 (MQ=255)                                                                                                                      cTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCATAACCGCGTGAATTGGTgc                             <  2:265591/149‑1 (MQ=255)                                                                                                                          aCCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCATAACCGCGTGAATTGGTGcgcg                          <  8:167785/148‑1 (MQ=255)                                                                                                                          aCCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCATAACCGCGTGAATTGGTGcgcg                          >  3:136382/1‑148 (MQ=255)                                                                                                                           ccACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAg                                                                                              <  1:161040/79‑1 (MQ=255)                                                                                                                           ccACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAg                                                                                              >  2:161040/1‑79 (MQ=255)                                                                                                                              cTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCATAACCGCGTGAATTGGTGCGCGTAccc                     <  5:270492/149‑1 (MQ=255)                                                                                                                               tGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGTCAAAAGTGCATAACCGCGTGAATTg                                 >  7:261024/1‑136 (MQ=255)                                                                                                                               tGCACCATGGCGATGCACTACATGGGCTATGCCGTTGTCGATTT‑CCACATCAGGATCGATACGGTCGGTTTCCAGTACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGAATAACCGCGTGAATTg                                 <  8:261024/136‑1 (MQ=255)                                                                                                                                  aCCCTGGCGAGGCACTACCTGGGCGATGCCGGTGTCGATTG‑CCACATCAGGATCGTGACGGGCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCATAACCGCGTGAATTGGTGCGCGTACCCGTTg                 <  4:210502/149‑1 (MQ=255)                                                                                                                                      tGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCATAACCGCGTGAATTGGTGCGCGTACCCGTTGCGtt             >  6:263641/1‑149 (MQ=255)                                                                                                                                       ggCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCATAACCGCGTGAATTGGTGCGCGTACCCGTTGCGttt            >  5:73293/1‑149 (MQ=255)                                                                                                                                          gaggcacTACCTGGGCGATGCCGTTGTCGAATT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCATAACCGCGTGAATTGGTGCGCGTACCCGTTGCGTTTTg          >  1:262297‑M2/8‑148 (MQ=255)                                                                                                                                               acTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCATAACCGCGTGAATTGGTGCGCGTACCCGTTGCGTTTTGCAGGcc    <  3:55296‑M2/147‑1 (MQ=255)                                                                                                                                                cTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCATAACCGCGTGAATTGGTGCGCGTACCCGTTGCGTTTTGCAGGccc   >  6:45842‑M2/2‑149 (MQ=255)                                                                                                                                                cTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCATAACCGCGTGAATTGGTGCGCGTACCCGTTGCGTTTTGCAGGcc    >  4:108942‑M2/2‑148 (MQ=255)                                                                                                                                                 tACCTGGGCGATGCCGTTGTCGATTT‑CCACAACAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGCAGGGCAAAAGTGCATAACCGCGTGAATTGGTGCGCGTACCCGTTGCGTTTTGCAGGCCca  >  3:2096/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                                      CATGCCCAGTTGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTT‑CCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAAGTGCATAACCGCGTGAATTGGTGCGCGTACCCGTTGCGTTTTGCAGGCCCA  >  NC_002947/2129865‑2130157

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.