| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2991498 | 50 (0.930) | 5 (0.100) | 3/252 | NT | 9.6% | intergenic (‑19/+56) | vgrG‑I/hcpC‑I | type VI secretion system protein/hemolysin‑coregulated protein |
| ? | NC_002947 | = 2991558 | 46 (0.900) | coding (512/516 nt) | hcpC‑I | hemolysin‑coregulated protein | |||||
GCTGATCAGTTTCAGCTCCAGTTCAAAGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGGTGTTGGCTACATCGTGAGCCCACGTGATCTTTCGATACGCCAGCGATACTTCAAC > NC_002947/2991351‑2991646 | gCTGATCAGTTTCAGCTCCAGTTCAAAGTGTGCGATGATGACCTCGCGGAGTTCGTACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGTCATAAAAGATCCTTGTCCGCCGt < 7:112765/149‑1 (MQ=11) aTCAGTTTCAGCTCCAGTTCAAAGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAACGCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGt < 1:255230/146‑1 (MQ=21) aTCAGTTTCAGCTCCAGATCAAAGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACAACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTg > 5:246228/1‑148 (MQ=21) tCAGTTTCAGCTCCAGTTCAAAGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGaa > 4:154284/1‑149 (MQ=34) tCAGCTCCAGTTCAAAGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGcctgacctgtg > 7:18222‑M1/1‑137 (MQ=255) gCTCCAGTTCAAAGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATc > 6:302758/1‑142 (MQ=34) gCTCCAGTTCAAAGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATc < 5:302758/142‑1 (MQ=34) cTCCAGTTCAAAGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACaaa < 1:185866/149‑1 (MQ=34) cTCCAGTTCAAAGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACaaa < 3:69118/149‑1 (MQ=34) tCCAGTTCAAAGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAg > 6:329620/1‑149 (MQ=34) cAGTTCAAAGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGTATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAg < 8:102064/147‑1 (MQ=21) aGTTCAAAGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGccc > 6:145378/1‑149 (MQ=33) gTTCAAAGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCcg > 2:12428/1‑149 (MQ=32) ttCAAAGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCcgg > 6:195840/1‑149 (MQ=32) cAAAGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCt > 1:318249/1‑128 (MQ=32) cAAAGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCt < 2:318249/128‑1 (MQ=32) aaaGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCcgggcg > 3:118551/1‑149 (MQ=32) aaaGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCcgggcg < 2:51589/149‑1 (MQ=32) aaGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCATTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAAGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCcgggcgg < 4:117071/149‑1 (MQ=17) aGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCcgggcggg > 6:6503/1‑149 (MQ=32) aGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCcgggcggg < 5:329620/149‑1 (MQ=32) aGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCcgggcggg > 6:203199/1‑149 (MQ=32) gcgcTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATgg > 1:308803/1‑149 (MQ=32) gcTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCgggcaggccatgcc < 5:195840/149‑7 (MQ=12) ccTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAac > 7:240553/1‑118 (MQ=32) ccTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAac < 8:240553/118‑1 (MQ=32) ccTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCggg < 1:83091/149‑1 (MQ=32) cTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCgggg > 7:138854/1‑149 (MQ=32) ttCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGcac < 5:145378/149‑1 (MQ=32) gAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAg < 5:6503/148‑1 (MQ=33) aCGACACCACTTCGAATGCATCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGt < 3:21672/148‑1 (MQ=21) gACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAg > 1:26720/1‑149 (MQ=34) accacATCGAATGCAGCTTTCCAA‑ACGAGTGCCTAAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCATGTCCTCCGTCTGAATAAACACAAAGCCCGGGCGGGCATGGCCTC‑CCCGGGGCATTTCCAAAGGTCAGGcg < 4:267149‑M2/149‑3 (MQ=255) cacTTCGAATTCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGcctgacccgtgcaaatgccccgggcaggccatgcccgcccgggctttgtgttgattcagacggc < 3:249955‑M1/149‑65 (MQ=255) cacTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGcctgacctgtgcaaatgccccgggcaggccatgcccgcccgggctttgtgttgattcagacggc < 8:18222‑M1/149‑65 (MQ=255) cacTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGcggc > 8:138854‑M2/1‑145 (MQ=255) acTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGcctgacctgtgcaaatgccccgggcaggccatgcccgcccgggctttgtgttgattcagacggcg < 7:296455‑M1/149‑66 (MQ=255) cTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGcggcgg > 2:26720‑M2/1‑143 (MQ=255) tCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCACGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACCGGTCAGGCGGCGGGt > 3:240324/1‑149 (MQ=17) gAATTCAGCTTTGCCATCCGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGcctgacccgtgcaaatgccccgggcaggccatgcccgcccgggctttgtgttgattcagacggcggaca < 1:287499‑M1/149‑70 (MQ=255) aGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCa < 3:154284/149‑1 (MQ=32) aGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCa < 1:12428/149‑1 (MQ=32) tGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAgtc < 2:308803/147‑1 (MQ=32) gTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCtt < 2:61688/149‑1 (MQ=32) cTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGgt > 3:305263/1‑149 (MQ=32) cTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGGTGTTGGCt < 6:246228/149‑1 (MQ=34) gcAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGgtgt > 4:281738/1‑137 (MQ=33) gcAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGgtgt < 3:281738/137‑1 (MQ=33) aaTCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGGTGTTGGCTACATCGTGAg > 7:91813/1‑149 (MQ=34) tCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGGCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGGTGTTGGCTACATCGTGAGcc < 5:203199/149‑1 (MQ=21) cATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCATGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGGTGTTGGCTACATCGTGAGCCCACGTGATCTTTc > 6:4946/1‑148 (MQ=21) aTAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGGTGTTgg > 2:281437/1‑120 (MQ=35) aTAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGGTGTTgg < 1:281437/120‑1 (MQ=35) aTAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGGTGTTGGCTACATCGTGAGCCCACGTGATCTTTCGa < 8:91813/149‑1 (MQ=34) tAAAAGATCCTTGTCCGCCGTCTGGATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGGTGTTGGCTACATCGTGAGCCCACGTGATCTTTCGa > 2:74070/1‑148 (MQ=21) tAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCTGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGGTGTTGGCTACATCGTGAGCCCACGTGATCTTTc < 2:254091/146‑1 (MQ=21) tAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGGTGTTGGCTACATCGTGAGCCCACGTGATCTTTc > 1:254091/1‑146 (MQ=34) tAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGGTGTTGGCTACATCGTGAGCCCACGTGATCTTTc > 1:258447/1‑146 (MQ=34) tAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGGTGTTGGCTACATCGTGAGCCCACGTGATCTTTc < 2:258447/146‑1 (MQ=34) tAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGGTGTTGGCTACATCGTGAGCCCACGTGATCTTTCGAt < 4:305263/149‑1 (MQ=34) aaGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGGTGTTGGCTACATCGTGAGCCCACGTGATCTTTCGATACg > 4:291984/1‑149 (MQ=34) ttGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGGTGTTGGCTACATCGTGAGCCCACGTGATCTTTCGATACGCCAGCGa > 3:274627/1‑149 (MQ=34) tGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACGGGTCAGGcggcggacaaggatcttttatgcctagccaatctgatttgcgctacagctttgaggcactcggatggcaaagctgaattc < 1:287499‑M2/149‑81 (MQ=255) gTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGGTGTTGGCTACATCGTGAGCCCACGTGATCTTTCGATACGCCAGCGa < 5:4946/147‑1 (MQ=34) ccgccgcctgacctgtgcaaatgccccgggcaggccatgcccgcccgggctttgtgttgattcagacggcggacaaggatcttttatgcctagccaatctgatttgcgctacagctttgaggcactcgttggcaaagctgcattcgaag > 2:26720‑M1/1‑6 (MQ=255) cgccgTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGcggcggacaaggatcttttatgcctagccaatctgatttgcgctacagctttgaggcactcgttggcaaagctgcattcgaagt < 7:296455‑M2/149‑85 (MQ=255) gccgcctgacctgtgcaaatgccccgggcaggccatgcccgcccgggctttgtgttgattcagacggcggacaaggatcttttatgcctagccaatctgatttgcgctacagctttgaggcactcgttggcaaagctgcattcgaagtg > 8:138854‑M1/1‑4 (MQ=255) gccgTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACGGGTCAGGcggcggacaaggatcttttatgcctagccaatctgatttgcgctacagctttgaggcactcgttggcaaagctgaattcgaagtg < 3:249955‑M2/149‑86 (MQ=255) gccgTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGcggcggacaaggatcttttatgcctagccaatctgatttgcgctacagctttgaggcactcgttggcaaagctgcattcgaagtg < 8:18222‑M2/149‑86 (MQ=255) cgcctgacctttggaaatgccccggggaggccatgcccgcccgggctttgtgtttattcagacggaggacatggatcttttatgcctagccaatctgatttgcgctacagcttttaggcactcgtttggaaagctgcattcgatgtggt < 4:267149‑M1/149‑148 (MQ=255) gTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTGACCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGGTGTTGGCTACATCGTGAGCCCACGTGATCTTTCGATACGCTAGCGATACTTCaa > 1:232735/1‑149 (MQ=255) gTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGGTGTTGGCTACATCGTGAGCCCACGTGATCTTTCGATACGCCAGCGATACTTCAAc < 4:274627/149‑1 (MQ=34) | GCTGATCAGTTTCAGCTCCAGTTCAAAGGGTGCGCTGATGCCCTCGCGGAGTTCGAACGACACCACTTCGAATGCAGCTTTGCCA‑ACGAGTGCCTCAAA‑GCTGTAGCGCAAATCAGATTGGCTAGGCATAAAAGATCCTTGTCCGCCGTCTGAATCAACACAAAGCCCGGGCGGGCATGGCCTG‑CCCGGGGCATTTGCACAGGTCAGGCGGCGGGTGCGCGCCAGTCGTCAGAGCCTTCGGTGTTGGCTACATCGTGAGCCCACGTGATCTTTCGATACGCCAGCGATACTTCAAC > NC_002947/2991351‑2991646 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |