New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3249435 =	59 (1.100)	4 (0.080)	4/254	NT	7.1%	coding (1055/1704 nt)	ureC	urease subunit alpha
	?	NC_002947	3249516 =	48 (0.930)					coding (1136/1704 nt)	ureC	urease subunit alpha

CTTACACGATCAACACCGTGGACGAGCACCTGGACATGCTCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAG  >  NC_002947/3249288‑3249583                                                                                                                                                       |                                                                                                                                                     cTTAAACGATCAACACCGTGGACGAGCACCTGGACATGCTCATGTTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGgc                                                                                                                                                     <  7:122612/149‑1 (MQ=255)  ttACACGATCAACACCGTGGACGAGCACCTGGACATGCTCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGgcg                                                                                                                                                    >  3:102331/1‑149 (MQ=255)     cacGATCAACACCGTGGACGAGCACCTGGACATGCTCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCt                                                                                                                                                 >  7:181427/1‑149 (MQ=255)      acGATCAACACCGTGGACGAGCACCTGGACATGCTCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATggg                                                                                                                                                      >  7:113951/1‑143 (MQ=255)      acGATCAACACCGTGGACGAGCACCTGGACATGCTCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATggg                                                                                                                                                      <  8:113951/143‑1 (MQ=255)         aTCAACACCGTGGACGAGCACCTGGACATGCTCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGc                                                                                                                                             <  6:26148/149‑1 (MQ=255)          tCAACACCGTGGACGAGCACCTGGACATGCTCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGc                                                                                                                                             >  6:252955/1‑148 (MQ=255)            aaCACCGTGGACGAGCACCTGGACATGCTCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCAt                                                                                                                                          <  7:90055/149‑1 (MQ=255)             acacCGTGGACGAGCACCTGGACATGCTCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCAt                                                                                                                                          >  6:107748/1‑148 (MQ=255)              cacCGTGGACGAGCACCTGGACATGCTCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATggg                                                                                                                                                      <  1:316345/135‑1 (MQ=255)              cacCGTGGACGAGCACCTGGACATGCTCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATggg                                                                                                                                                      >  2:316345/1‑135 (MQ=255)               acCGTGGACGAGCACCTGGACATGCTCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGAc                                                                                                                                       <  1:255955/149‑1 (MQ=255)                ccGTGGACGAGCACCTGGACATGCTCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGAcc                                                                                                                                      >  5:119371/1‑149 (MQ=255)                 cGTGGACGAGCACCTGGACATGCTCATGGTCTGTCACCACCTGGACCCGGAGTATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGAcc                                                                                                                                      >  1:249920/1‑149 (MQ=255)                 cGTGGACGAGCACCTGGACATGCTCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCt                                                                                                                                     >  2:328840/1‑149 (MQ=255)                     gACGAGCACCTGGACATGCTCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCttt                                                                                                                                               <  3:48185/135‑1 (MQ=255)                     gACGAGCACCTGGACATGCTCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCttt                                                                                                                                               >  4:48185/1‑135 (MQ=255)                      aCGAGCACCTGGACATGCTCATGGTCTGTCACCACCTGGACCC‑TAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTcc                                                                                                                                <  2:201316/149‑1 (MQ=255)                              cTGGACATGCTCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTcc                                                                                                                          >  4:257688/1‑147 (MQ=255)                                    aTGCTCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCGGCCCAt                                                                                                                  <  4:102331/149‑1 (MQ=255)                                      gCTCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATgg                                                                                                                >  8:72522/1‑149 (MQ=255)                                        tCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGc                                                                                                              >  6:31765/1‑149 (MQ=255)                                              tCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGtt                                                                                                        <  6:325657/149‑1 (MQ=255)                                              tCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGtt                                                                                                        >  1:282130/1‑149 (MQ=255)                                              tCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGtt                                                                                                        <  8:28194/149‑1 (MQ=255)                                              tCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGtt                                                                                                        <  5:252955/149‑1 (MQ=255)                                                    accaccTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAg                                                                                                  >  3:247506/1‑149 (MQ=255)                                                    accaccCGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAg                                                                                                  >  4:234266/1‑149 (MQ=255)                                                     ccaccTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAgg                                                                                                 >  5:222508/1‑149 (MQ=255)                                                     ccaccTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAgg                                                                                                 <  1:253784/149‑1 (MQ=255)                                                     ccaccTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAgg                                                                                                 >  5:76666/1‑149 (MQ=255)                                                      caccTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATgg                                                                                                                >  6:1074/1‑133 (MQ=255)                                                        ccTGGACCC‑GATCCTCAGGCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAggt                                                                                                <  1:117702/149‑1 (MQ=255)                                                         ttgatggtgtacttggcgatgtagcgcttgacccggaagttgtcgctgtacggggtgtccggtgccagcggcccgcgacgcagcttcatctggtGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAggt                                                                                                <  3:115959‑M1/55‑1 (MQ=255)                                                              ccc‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGtgctgc                                                                                        >  6:119043/1‑149 (MQ=255)                                                               cc‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTgcg                                                                                       >  2:54203/1‑149 (MQ=255)                                                               cc‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTgcg                                                                                       >  4:54906/1‑149 (MQ=255)                                                               cc‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTgcg                                                                                       <  5:31765/149‑1 (MQ=255)                                                                  gAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCa                                                                                     <  6:119371/149‑1 (MQ=255)                                                                            ccGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAg                                                                             <  4:247506/149‑1 (MQ=255)                                                                            ccGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAg                                                                             >  7:294580/1‑149 (MQ=255)                                                                                 cgcttgacccggaagttgtcgctgtacggggtgtccggtgccagcggcccgcgacgcagcttcatctggtGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGgc                                                                        >  4:115959‑M1/71‑149 (MQ=255)                                                                                    gTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCa                                                                     <  6:222508/149‑1 (MQ=255)                                                                                     tGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCAc                                                                    <  3:257688/149‑1 (MQ=255)                                                                                       gCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCAcc                                                                   <  2:249920/148‑1 (MQ=255)                                                                                         cTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCAc                                                                    >  6:64284/1‑145 (MQ=255)                                                                                         cTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGa                                                                <  5:64284/149‑1 (MQ=255)                                                                                             gCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATg                                                              >  3:102145/1‑147 (MQ=255)                                                                                             gCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGaa                                                            <  5:119043/149‑1 (MQ=255)                                                                                               gttgtcgctgtacggggtgtccggtgccagcggcccgcgacgcagcttcatctggtGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCAc                                                                    <  5:13977‑M1/83‑1 (MQ=255)                                                                                               gttgtcgctgtacggggtgtccggtgccagcggcccgcgacgcagcttcatctggtGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCAc                                                                    >  6:13977‑M1/57‑139 (MQ=255)                                                                                                     aCGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGc                                                                               <  4:288787/122‑1 (MQ=255)                                                                                                     aCGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTc                                                    >  6:207624/1‑149 (MQ=255)                                                                                                         atgcgccgcGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCgg                                                <  7:72522/146‑1 (MQ=255)                                                                                                           tCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGc                                              >  7:145337/1‑149 (MQ=255)                                                                                                             gccgcGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCg                                            >  2:323656/1‑149 (MQ=255)                                                                                                               cgcgAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCt                                          <  1:323656/149‑1 (MQ=255)                                                                                                                  gAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGc                                       <  3:234266/149‑1 (MQ=255)                                                                                                                      ccATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCg                                   <  5:107748/149‑1 (MQ=255)                                                                                                                      ccATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCg                                   >  1:183242/1‑149 (MQ=255)                                                                                                                           gCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGaca                               <  3:54906/148‑1 (MQ=255)                                                                                                                               ccGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACAcccc                           <  4:102145/148‑1 (MQ=255)                                                                                                                               ccGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCg                          <  8:145337/149‑1 (MQ=255)                                                                                                                               ccGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCg                          <  8:294580/149‑1 (MQ=255)                                                                                                                                 gAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTa                        >  3:207714/1‑149 (MQ=255)                                                                                                                                   ggACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACa                      <  6:76666/149‑1 (MQ=255)                                                                                                                                   ggACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACa                      <  1:54203/149‑1 (MQ=255)                                                                                                                                     aCATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGc                    <  7:198069/149‑1 (MQ=255)                                                                                                                                                 aCATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCgg        <  5:207624/149‑1 (MQ=255)                                                                                                                                                      ggCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTc     >  3:129405/1‑147 (MQ=255)                                                                                                                                                       GCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAg  >  1:328840‑M1/1‑149 (MQ=255)                                                                                                                                                       |                                                                                                                                                     CTTACACGATCAACACCGTGGACGAGCACCTGGACATGCTCATGGTCTGTCACCACCTGGACCC‑GAGCATC‑‑GCCGAGGACGTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAG  >  NC_002947/3249288‑3249583

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.