New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3249435 =59 (1.100)4 (0.080) 4/254 NT 7.1% coding (1055/1704 nt) ureC urease subunit alpha
?NC_002947 3249516 = 48 (0.930)coding (1136/1704 nt) ureC urease subunit alpha

GTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCAAGTACACCATCAACCCGGCACTCACCCATGGCATCGGTCACGAAGTGGGCTCGGTGGAGGT  >  NC_002947/3249368‑3249657
                                                                                                                                                    |                                                                                                                                             
gTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCa                                                                                                                                               <  6:222508/149‑1 (MQ=255)
 tGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCAc                                                                                                                                              <  3:257688/149‑1 (MQ=255)
   gCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCAcc                                                                                                                                             <  2:249920/148‑1 (MQ=255)
     cTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCAc                                                                                                                                              >  6:64284/1‑145 (MQ=255)
     cTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGa                                                                                                                                          <  5:64284/149‑1 (MQ=255)
         gCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATg                                                                                                                                        >  3:102145/1‑147 (MQ=255)
         gCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGaa                                                                                                                                      <  5:119043/149‑1 (MQ=255)
           gttgtcgctgtacggggtgtccggtgccagcggcccgcgacgcagcttcatctggtGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCAc                                                                                                                                              >  6:13977‑M1/57‑139 (MQ=255)
           gttgtcgctgtacggggtgtccggtgccagcggcccgcgacgcagcttcatctggtGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCAc                                                                                                                                              <  5:13977‑M1/83‑1 (MQ=255)
                 aCGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTc                                                                                                                              >  6:207624/1‑149 (MQ=255)
                     atgcgccgcGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCgg                                                                                                                          <  7:72522/146‑1 (MQ=255)
                       tCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGc                                                                                                                        >  7:145337/1‑149 (MQ=255)
                         gccgcGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCg                                                                                                                      >  2:323656/1‑149 (MQ=255)
                           cgcgAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCt                                                                                                                    <  1:323656/149‑1 (MQ=255)
                              gAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGc                                                                                                                 <  3:234266/149‑1 (MQ=255)
                                  ccATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCg                                                                                                             >  1:183242/1‑149 (MQ=255)
                                  ccATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCg                                                                                                             <  5:107748/149‑1 (MQ=255)
                                       gCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGaca                                                                                                         <  3:54906/148‑1 (MQ=255)
                                           ccGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACAcccc                                                                                                     <  4:102145/148‑1 (MQ=255)
                                           ccGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCg                                                                                                    <  8:145337/149‑1 (MQ=255)
                                           ccGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCg                                                                                                    <  8:294580/149‑1 (MQ=255)
                                             gAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTa                                                                                                  >  3:207714/1‑149 (MQ=255)
                                               ggACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACa                                                                                                <  1:54203/149‑1 (MQ=255)
                                               ggACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACa                                                                                                <  6:76666/149‑1 (MQ=255)
                                                 aCATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGc                                                                                              <  7:198069/149‑1 (MQ=255)
                                                             aCATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCgg                                                                                  <  5:207624/149‑1 (MQ=255)
                                                                 gtgcgccacctgccaggtgcgcagcaccacctcgccaacccggcccatggcctgggagtcggacgaggtcatggcaaaggcgcACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAAc                                                                                        >  6:13977‑M2/84‑139 (MQ=255)
                                                                 gtgcgccacctgccaggtgcgcagcaccacctcgccaacccggcccatggcctgggagtcggacgaggtcatggcaaaggcgcACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAAc                                                                                        <  5:13977‑M2/56‑1 (MQ=255)
                                                                  ggCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTc                                                                               >  3:129405/1‑147 (MQ=255)
                                                                   GCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAg                                                                            >  1:328840‑M1/1‑149 (MQ=255)
                                                                     gccacctgccaggtgcgcagcaccacctcgccaacccggcccatggcctgggagtcggacgaggtcatggcaaaggcgcACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAgcg                                                                          >  4:115959‑M2/80‑149 (MQ=255)
                                                                     GCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAgcg                                                                          <  2:232216‑M1/149‑1 (MQ=255)
                                                                             cATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCg                                                                  >  2:147561/1‑149 (MQ=255)
                                                                             cATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCg                                                                  >  5:237451/1‑149 (MQ=255)
                                                                              aTGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACCCCCCGTACAGCGACAACTTCCGGGTCAAGCGCTCCATCGc                                                                 >  4:168689/1‑149 (MQ=255)
                                                                                gACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGcc                                                                >  3:266455/1‑148 (MQ=255)
                                                                                   cTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTAc                                                                      >  5:341121/1‑139 (MQ=255)
                                                                                   cTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTAc                                                                      <  6:341121/139‑1 (MQ=255)
                                                                                   cTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCAAg                                                             >  5:341021/1‑148 (MQ=255)
                                                                                    tCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTcgcg                                                                                                                           >  6:109310/1‑85 (MQ=255)
                                                                                    tCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTcgcg                                                                                                                           <  5:109310/85‑1 (MQ=255)
                                                                                      gTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCAAGTa                                                           <  1:232216/147‑1 (MQ=255)
                                                                                         cGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCaa                                                              >  2:76153/1‑141 (MQ=255)
                                                                                         cGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCaa                                                              <  1:76153/141‑1 (MQ=255)
                                                                                             acctcgccaacccggcccatggcctgggagtcggacgaggtcatggcaaaggcgcACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCAAGTACACCATCaa                                                  <  3:115959‑M2/94‑1 (MQ=255)
                                                                                                  ggCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGCCAACTTCCGGGTCAAGCGCTACATCGCCAAGTACACCAACAACCCgg                                             >  8:142687/1‑149 (MQ=255)
                                                                                                     tgagtgCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCAAGTACACCATCAACCCGGCAc                                          <  6:182206/144‑1 (MQ=255)
                                                                                                          gCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGCACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCAAGTACACCATCAACCCGGCACTCAcc                                     <  8:181427/149‑1 (MQ=255)
                                                                                                            cGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCAAGTACACCATCAACCCGGCACTCACCCa                                   <  2:282130/149‑1 (MQ=255)
                                                                                                                            tgctgcGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCAAGTACACCATCAACCCGGCACTCAcc                                     <  5:84258/131‑1 (MQ=255)
                                                                                                                            tgctgcGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCAAGTACACCATCAACCCGGCACTCAcc                                     >  6:84258/1‑131 (MQ=255)
                                                                                                                                 cgcACCTGGCAGGTGGTGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCAAGTACACCATCAACCCGGCACTCACCCATgg                                <  5:137413/131‑1 (MQ=255)
                                                                                                                                 cgcACCTGGCAGGTGGAGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCAAGTACACCATCAACCCGGCACTCACCCATgg                                >  6:137413/1‑131 (MQ=255)
                                                                                                                                  gcACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCAAGTACACCATCAACCCGGCACTCACCCATGGCATCGGTCACGAAGTGGGc             <  4:266455/149‑1 (MQ=255)
                                                                                                                                    aCCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCAAGTACACCATCAACCCGGCACTCACCCATGGCATCGGTCACGAAGTGGGCTc           <  4:129405/149‑1 (MQ=255)
                                                                                                                                     gcTGGCAGTGGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGGCAAGCGCTACATCGCCAAGTACACCATCAACCCGGCACTCACCCATGGCATCGGTCACGAAGTGGGCTCg          <  4:207714/148‑1 (MQ=255)
                                                                                                                                      cTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCAAGTACACCATCAACCCGGCACTCACCCATGGCATCGGTCACGAAGTGGGCTCgg         >  3:262509/1‑149 (MQ=255)
                                                                                                                                      cTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCAAGTACACCATCAACCCGGCACTCACCCATGGCATCGGTCACGAAGTGGGCTCgg         <  6:341021/149‑1 (MQ=255)
                                                                                                                                        ggCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCAAGTACACCATCAACCCGGCACTCACCCATGGCATCGGTCACGAAGTGGGCTCGGTg       >  1:202429/1‑149 (MQ=255)
                                                                                                                                         gCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCAAGTACACCATCAACCCGGCACTCACCCATGGCATCGGTCACGAAGTGGGCTCGGTg       <  4:262509/148‑1 (MQ=255)
                                                                                                                                                    aCCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCAAGTACACCATCAACCCGGCACTCACCCATGGCATCGGTCACGAAGTGGGCTCGGTGGAGGt  >  5:300042/1‑142 (MQ=255)
                                                                                                                                                    aCCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACAGCGCCAAGTACACCATCAACCCGGCACTCACCCATGGCATCGGTCACGAAGTGGGCTCGGTGGAGGt  <  6:300042/142‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                             
GTGGCCTTCGCCGAGTCACGCATTCGCCGCGAAACCATCGCTGCCGAGGACATCCTCCACGACATGGGCGCCTTTGCCATGACCTCGTCCGACTCCCAGGCCATGGGCCGGGTTGGCGAGGTGGTGCTGCGCACCTGGCAGGTGGCGCACCAGATGAAGCTGCGTCGCGGGCCGCTGGCACCGGACACCCCGTACAGCGACAACTTCCGGGTCAAGCGCTACATCGCCAAGTACACCATCAACCCGGCACTCACCCATGGCATCGGTCACGAAGTGGGCTCGGTGGAGGT  >  NC_002947/3249368‑3249657

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.