New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4925636 =54 (1.000)4 (0.080) 4/256 NT 6.9% coding (390/858 nt) PP_4335 flagellar motor protein
?NC_002947 4925682 = 55 (1.050)coding (344/858 nt) PP_4335 flagellar motor protein

GGCAGGTTGTCAGTGAAGCCTTCGACGTGCACCGGGTTGGCGAACGGCTTGAGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGCTCGCTGTCTTTGAC  >  NC_002947/4925490‑4925779
                                                                                                                                                  |                                                                                                                                               
ggCAGGTTGTCAGTGAAGCCTTCGACGTGCACCGGGTTGGCGAACGGCTTGAGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGctcgatctcga                                                                                                                                                <  5:173151/148‑1 (MQ=255)
 gCAGGTTGTCAGTGAAGCCTTCGACGTGCACCGGGTTGGCGAACGGCTTGAGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGctcgatctcgat                                                                                                                                               >  5:191693/1‑148 (MQ=255)
 gCAGGTTGTCAGTGAAGCCTTCGACGTGCACCGGGTTGGCGAACGGCTTGAGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCtcgatctcgatc                                                                                                                                              <  6:166909/149‑1 (MQ=255)
 cgattggcgatgagcagccgctcagcgtgcgcccggccgaaccgctggtcaaagacagcgagcagaccgaagcgggcctggcggcgaccaatgtcgacccgttgaaaaccatcagcgatgacgtgcgcgatgccttcggcgacctGAt                                                                                                                                               <  1:14728‑M1/3‑1 (MQ=255)
  gattggcgatgagcagccgctcagcgtgcgcccggccgaaccgctggtcaaagacagcgagcagaccgaagcgggcctggcggcgaccaatgtcgacccgttgaaaaccatcagcgatgacgtgcgcgatgccttcggcgacctGATc                                                                                                                                              <  8:267795‑M1/4‑1 (MQ=255)
    ggTTGTCAGTGAAGCCTTCGACGTGCACCGGGTTGGCGAACGGCTTGAGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCcac                                                                                                                                           <  6:283628/149‑1 (MQ=255)
         tCAGTGAAGCCTTCGACGTGCACCGGGTTGGCGAACGGCTTGAGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTc                                                                                                                                      >  7:245901/1‑149 (MQ=255)
             tGAAGCCTTCGACGTGCACCGGGTTGGCGAACGGCTTGAGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTg                                                                                                                                  >  8:39354/1‑149 (MQ=255)
               aaGCCTTCGATGTGCACCGGGTTGGCGAACGGCTTGAGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGcc                                                                                                                                >  2:96845/1‑149 (MQ=255)
                   cTTCGACGTGCACCGGGTTGGCGAACGGCTTGAGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCtcgatctcgatc                                                                                                                                              >  4:147723/1‑131 (MQ=255)
                   cTTCGACGTGCACCGGGTTGGCGAACGGCTTGAGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCtcgatctcgatc                                                                                                                                              <  3:147723/131‑1 (MQ=255)
                    ttCGACGTGCACCGGGTTGGCGAACGGCTTGAGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAACCAGCAGCCAAGAGTTGAGCTCGATCTCGATCCACAGCTCTTTGCCGCGCa                                                                                                                           >  7:189510/1‑149 (MQ=255)
                       gACGTGCACCGGGTTGGCTAACGGCTTGAGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACgg                                                                                                                        <  8:274536/149‑1 (MQ=255)
                       gACGTGCACCGGGTTGGCGAACGGCTTGAGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACg                                                                                                                         <  4:74508/148‑1 (MQ=255)
                        aCGTGCACCGGGTTGGCGAACGGCTTGAGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGt                                                                                                                       >  2:197627/1‑149 (MQ=255)
                             cACCGGGTTGGCGAACGGCTTGAGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATc                                                                                                                   <  4:111009/148‑1 (MQ=255)
                               gcccggccgaaccgctggtcaaagacagcgagcagaccgaagcgggcctggcggcgaccaatgtcgacccgttgaaaaccatcaccgatgacgtgcgcgatgccttcggcgacctGATCCACAGCTCGTTGCCGCGCACGGTCATCTgg                                                                                                                <  2:240062‑M1/34‑1 (MQ=255)
                                          aaCGGCTTGAGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATc                                                                                                    <  2:29097/149‑1 (MQ=255)
                                           aCGGCTTGAGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATc                                                                                                    <  6:191693/149‑1 (MQ=255)
                                              gCTTGAGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAgg                                                                                                 >  8:98535/1‑149 (MQ=255)
                                                ttGAGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTc                                                                                               >  5:24776/1‑149 (MQ=255)
                                                gtcaaagacagcgagcagaccgaagcgggcctggcggcgaccaatgtcgacccgttgaaaaccatcagcgatgacgtgcgcgatgccttcggcgacctGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAgg                                                                                                 >  1:240062‑M1/99‑147 (MQ=255)
                                                   aGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGc                                                                                             <  8:245901/148‑1 (MQ=255)
                                                     gATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCg                                                                                           >  8:185225/1‑148 (MQ=255)
                                                          tGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCa                                                                                     >  4:30154/1‑149 (MQ=255)
                                                           ggCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCAt                                                                                    >  2:238966/1‑149 (MQ=255)
                                                              cACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATcgc                                                                                 >  3:44505/1‑149 (MQ=255)
                                                              cACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATcgc                                                                                 >  4:164820/1‑149 (MQ=255)
                                                               aCCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTg                                                                                                       >  3:53132/1‑126 (MQ=255)
                                                               aCCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTg                                                                                                       <  4:53132/126‑1 (MQ=255)
                                                                ccTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCgcgc                                                                               <  7:39354/149‑1 (MQ=255)
                                                                 gaccgaagcgggcctggcggcgaccaatgtcgacccgttgaaaaccatcagcgatgacgtgcgcgatgccttcggcgacctGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTc                                                                                               >  6:80817‑M1/82‑132 (MQ=255)
                                                                 gaccgaagcgggcctggcggcgaccaatgtcgacccgttgaaaaccatcagcgatgacgtgcgcgatgccttcggcgacctGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTc                                                                                               <  5:80817‑M1/51‑1 (MQ=255)
                                                                  ttCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGGATCGCGCAc                                                                             >  4:28039/1‑149 (MQ=255)
                                                                  ttCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCAc                                                                             >  2:14728/1‑149 (MQ=255)
                                                                     tcGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGt                                                                           >  2:54857/1‑148 (MQ=255)
                                                                     tcGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCCAAGAGTTGAGCTAGCTCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCGGGTCGCTGTTGATCAGGTCGACGAAGGCATACCGCACGt                                                                           >  6:66747/1‑148 (MQ=255)
                                                                             cGCAACCGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATcgc                                                                                 >  5:85309/1‑134 (MQ=255)
                                                                             cGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATcgc                                                                                 <  6:85309/134‑1 (MQ=255)
                                                                               ctaaCGCCTTGGCAGTGGGCATCGGGGCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCGACAGCTCGTTGCCGCGCACGGTCTTCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATg                                                                <  5:66747/147‑1 (MQ=255)
                                                                                aaaCGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATgg                                                               >  7:267795/1‑149 (MQ=255)
                                                                                  aCGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGtt                                                             <  3:164820/149‑1 (MQ=255)
                                                                                      cTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCAc                                                                             <  8:301697/129‑1 (MQ=255)
                                                                                      cTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCAc                                                                             >  7:301697/1‑129 (MQ=255)
                                                                                         gTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAAc                                                       <  1:234210/148‑1 (MQ=255)
                                                                                               gggCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGa                                                >  5:35970/1‑149 (MQ=255)
                                                                                                ggCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGa                                                >  8:13014/1‑148 (MQ=255)
                                                                                                 gCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGACa                                              >  5:16466/1‑149 (MQ=255)
                                                                                                  cATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGACAt                                             >  3:160525/1‑149 (MQ=255)
                                                                                                   aTCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGACAtt                                            <  6:24776/149‑1 (MQ=255)
                                                                                                   aTCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGACAtt                                            <  1:238966/149‑1 (MQ=255)
                                                                                                    tCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTg                                           <  1:197627/149‑1 (MQ=255)
                                                                                                      gcgTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTgg                                          <  7:98535/148‑1 (MQ=255)
                                                                                                           accacTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTcgcc                                     <  3:30154/148‑1 (MQ=255)
                                                                                                             cacTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTcgccgc                                   >  6:54685/1‑148 (MQ=255)
                                                                                                                         gcagcGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCg                      <  6:35970/149‑1 (MQ=255)
                                                                                                                         gcagcGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCg                      <  4:44505/149‑1 (MQ=255)
                                                                                                                          cagcGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCgg                     >  8:60570/1‑149 (MQ=255)
                                                                                                                            gcGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTc                   >  8:65096/1‑149 (MQ=255)
                                                                                                                             cGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATcgc                                                                                 >  4:73387/1‑86 (MQ=255)
                                                                                                                             cGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATcgc                                                                                 <  3:73387/86‑1 (MQ=255)
                                                                                                                                   gTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGCTCGc            <  7:60570/149‑1 (MQ=255)
                                                                                                                                     tGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGCTCGCTg          >  4:16253/1‑149 (MQ=255)
                                                                                                                                            gatctcgatcCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGCTCGCTGTCttt     <  1:96845/147‑1 (MQ=255)
                                                                                                                                            gatctcgatcCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGCTCGCTGTCTTTg    <  7:13014/148‑1 (MQ=255)
                                                                                                                                              tctcgatcCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCAGTTGATCAGGTCGCCCAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGCTCGCTGTCTTTGAc  >  2:158070/1‑148 (MQ=255)
                                                                                                                                                  |                                                                                                                                               
GGCAGGTTGTCAGTGAAGCCTTCGACGTGCACCGGGTTGGCGAACGGCTTGAGGATGCTGGCCACCTTCTCGATGATCGCAAACGCCTTGTCACTGGGCATCGCGTCACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCGCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGCTCGCTGTCTTTGAC  >  NC_002947/4925490‑4925779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.