New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5334560	65 (1.210)	3 (0.060)	3/252	NT	5.2%	coding (990/2976 nt)	PP_4695	two‑component system sensor histidine kinase
	?	NC_002947	= 5334646	47 (0.910)					coding (1076/2976 nt)	PP_4695	two‑component system sensor histidine kinase

TTCCTGCTGCTGATGAGCCTTGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTGGACCCGCCGTGCACTGATCGTC  >  NC_002947/5334414‑5334707                                                                                                                                                   |                                                                                                                                                    ttCCTGCTGCTGATGAGCCTTGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGC                                                                                                                                                     <  4:85439‑M1/147‑1 (MQ=255)    ctgctgctgATGAGCCTTGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTc                                                                                                                                                <  2:266708/149‑1 (MQ=255)        tgctgATGAGCCTTGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCgg                                                                                                                                              >  3:163494/1‑147 (MQ=255)        tgctgATGAGCCTTGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCgg                                                                                                                                              >  6:140015/1‑147 (MQ=255)         gctgATGAGCCTTGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGcag                                                                                                                                           >  2:278767/1‑149 (MQ=255)          ctgAGGAGCCTGGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGca                                                                                                                                            <  8:119907/147‑1 (MQ=255)               gaGCCTTGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGcagc                                                                                                                                          >  1:252907/1‑144 (MQ=255)               gaGCCTTGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGcagc                                                                                                                                          <  2:252907/144‑1 (MQ=255)               gaGCCTTGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCg                                                                                                                                     >  3:133615/1‑149 (MQ=255)                  ccTTGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGcc                                                                                                                                  <  5:140015/149‑1 (MQ=255)                   cTTGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCATCAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCt                                                                                                                                 >  5:21195/1‑149 (MQ=255)                    ttGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCt                                                                                                                                 >  2:55856/1‑148 (MQ=255)                      gccgtgccgCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTg                                                                                                                                <  4:163494/147‑1 (MQ=255)                          tgccgCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGatcatc                                                                                                                          <  3:125126/149‑1 (MQ=255)                           gccgCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCg                                                                                                                         >  4:77513/1‑149 (MQ=255)                                tGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCg                                                                                                                                               >  8:167885/1‑122 (MQ=255)                                       gtgGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTgg                                                                                                             >  6:312631/1‑149 (MQ=255)                                        tgGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGGCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGgc                                                                                                            <  1:278767/149‑1 (MQ=255)                                        tgGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTg                                                                                                              <  3:218309/147‑1 (MQ=255)                                        tgGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGgc                                                                                                            <  8:156854/149‑1 (MQ=255)                                           gccggccTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCt                                                                                                         <  6:62569/149‑1 (MQ=255)                                               gccTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCg                                                                                                     <  3:77513/149‑1 (MQ=255)                                                 cTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCggg                                                                                                   >  6:301888/1‑149 (MQ=255)                                                  tGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTACTGGCCTACATTGGCGGCCTGTCg                                                                                                                                               >  3:282315/1‑104 (MQ=255)                                                  tGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTACTGGCCTACATTGGCGGCCTGTCg                                                                                                                                               <  4:282315/104‑1 (MQ=255)                                                    cgcCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTg                                                                                                        >  7:302970/1‑141 (MQ=255)                                                    cgcCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTg                                                                                                        <  8:302970/141‑1 (MQ=255)                                                    cgcCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCa                                                                                                 <  5:207507/148‑1 (MQ=255)                                                          ggCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGcc                                                                                            <  7:49570/147‑1 (MQ=255)                                                            ccacAGCACCAGCCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGa                                                                                        <  2:34679/146‑1 (MQ=255)                                                             gcCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGACGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGaa                                                                                       <  4:206978/149‑1 (MQ=255)                                                              ccAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCtggtaaagcggcagcaccaggtggttcagggccatgcccgacagcgccagggtggtgacgat                                                                                       >  7:78703‑M1/1‑86 (MQ=255)                                                              ccAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAac                                                                                      >  3:233531/1‑149 (MQ=255)                                                                 gCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAaccac                                                                                   <  8:27057/149‑1 (MQ=255)                                                                   aCCATCCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAacc                                                                                     <  4:88622/145‑1 (MQ=255)                                                                   aCCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAacc                                                                                     >  3:88622/1‑145 (MQ=255)                                                                   aCCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCt                                                                                 >  4:243405/1‑149 (MQ=255)                                                                   aCCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCt                                                                                 >  1:261906/1‑149 (MQ=255)                                                                          ccGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCg                                                                                                     <  6:152971/122‑1 (MQ=255)                                                                             aGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATAGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCg                                                                       >  1:240205/1‑149 (MQ=255)                                                                              gTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCg                                                                       <  2:240205/148‑1 (MQ=255)                                                                               tACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGc                                                                      <  2:261906/148‑1 (MQ=255)                                                                                    cACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTAc                                                                 >  4:121353/1‑148 (MQ=255)                                                                                     aCCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCa                                                               >  6:9950/1‑149 (MQ=255)                                                                                       cctgggcctgggCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAgc                                                             <  5:204050‑M2/149‑3 (MQ=255)                                                                                             cctgggcATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCtggtaaagcggcagcaccaggtggttcagggccatgcccgacagcgccagggtggtgacgatgatcaggccgctggctgccgacaggccgccaa                                                       <  8:78703‑M1/149‑95 (MQ=255)                                                                                                gggcATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCgccggcc                                                     >  4:295966/1‑148 (MQ=255)                                                                                                 ggcATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCgccggcc                                                     <  3:243405/147‑1 (MQ=255)                                                                                                  gcATCGCCGCCAACCACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCtggtaaagcggcagcaccaggtggttcagggccatgcccgacagcgccagggtggtgacgatgatcaggccgctggctgccgacaggccgccaatgtag                                                  <  7:177614‑M1/149‑100 (MQ=255)                                                                                                  gcATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAg                                                  <  5:301888/149‑1 (MQ=255)                                                                                                  gcATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAg                                                  <  4:65300/149‑1 (MQ=255)                                                                                                   cATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGa                                                                                        >  2:211862/1‑110 (MQ=255)                                                                                                   cATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGa                                                                                        <  1:211862/110‑1 (MQ=255)                                                                                                   cATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACTACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAgg                                                 <  1:55856/149‑1 (MQ=255)                                                                                                   cATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAgg                                                 <  1:200112/149‑1 (MQ=255)                                                                                                    aTCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAggg                                                >  3:252980/1‑149 (MQ=255)                                                                                                             aacaacCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTa                                       <  3:295966/149‑1 (MQ=255)                                                                                                                aacCAGGCATTGGCACTGATGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGCACCACCTGGTGCTGCAGCTTTACCAGCCGCCGGCCGAGGGAAACATCTACCg                                    >  8:253275/1‑149 (MQ=255)                                                                                                                 cccAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGt                                   <  6:179616/148‑1 (MQ=255)                                                                                                                  ccAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGtt                                  >  8:81918/1‑149 (MQ=255)                                                                                                                  ccAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGtt                                  >  5:116375/1‑149 (MQ=255)                                                                                                                    aGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTgg                                >  3:154327/1‑149 (MQ=255)                                                                                                                            gCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGCCAACATCTACCGTTGGCTGAAGt                         <  5:9950/148‑1 (MQ=255)                                                                                                                              aCTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTGGa                      >  4:26549/1‑149 (MQ=255)                                                                                                                                       cTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAgccgccaatgtaggccagcagtgccaatgcctggtggttggcggcgatgc             <  7:177614‑M2/149‑51 (MQ=255)                                                                                                                                        tACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTGGACCCGCCGt              >  2:141091/1‑147 (MQ=255)                                                                                                                                        tACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTGGACCCGCCGt              <  1:141091/147‑1 (MQ=255)                                                                                                                                         aCATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTGGACCCGCCGTGc            >  2:97363/1‑148 (MQ=255)                                                                                                                                           aTTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTGGACCCGCCGTGCAc          <  8:116065/148‑1 (MQ=255)                                                                                                                                           aTTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTGGACCCGCCGTGCAc          >  7:116065/1‑148 (MQ=255)                                                                                                                                           aTTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTGGACCCGCCGTGCACt         <  4:252980/149‑1 (MQ=255)                                                                                                                                           aTTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTGGACCCGCCGTGCACt         <  5:312631/149‑1 (MQ=255)                                                                                                                                            ttGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAgccgccaatgtaggccagcagtgccaatgcctggttgttggcggcgatgcccagg        <  8:78703‑M2/149‑56 (MQ=255)                                                                                                                                                  gctggtaaagcggcagcaccaggtggttcagggccatgcccgacagcgccagggtggtgacgatgatcaggccgctggctgccgacaggccgccaatgtaggccagcagtgccaatgcctggttgttggcggcgatgcccaggcccagg  <  5:204050‑M1/149‑148 (MQ=255)                                                                                                                                                   |                                                                                                                                                    TTCCTGCTGCTGATGAGCCTTGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTGGACCCGCCGTGCACTGATCGTC  >  NC_002947/5334414‑5334707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.