New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5890484 =60 (1.110)3 (0.060) 3/250 NT 5.7% coding (2139/2367 nt) PP_5164 penicillin amidase family protein
?NC_002947 5890539 = 42 (0.820)coding (2194/2367 nt) PP_5164 penicillin amidase family protein

ACCCAGCCAGCTGGCAATGGGGCAAGGCCCATACCCTGACCCACAACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGT  >  NC_002947/5890339‑5890632
                                                                                                                                                 |                                                                                                                                                    
tttgcgccggaatcacccccatctgcgcccgctgatactgcccctgcacaaacccctcggcctggtccgcgtaatgccggtcgaacggcacgccactctgcccgaccgggttgatggtcagcgcctgcccggcatcggcaaagtcGATc                                                                                                                                                   <  8:131743‑M1/4‑1 (MQ=255)
  ccagccagCTGGCAATGGGGCAAGGCCCATACCCTGACCCACAACCATCCTCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAg                                                                                                                                                 <  1:248078/149‑1 (MQ=255)
  ccagccagCTGGCAATGGGGCAAGGCCCATACCCTGACCCACAACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAg                                                                                                                                                 >  1:285685/1‑149 (MQ=255)
   cagccagcTGGCAATGGGGCAAGGCCCATACCCTGACCCACAACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGc                                                                                                                                                <  5:80012/149‑1 (MQ=255)
    cgccggaatcacccccatctgcgcccgctgatactgcccctgcacatacccctcggcctggtccgcgtaatgccggtcgaacggcacgccactctgcccgaccgggttgatggtcagcgcctgcccggcatcggcaaagtcGATCAGc                                                                                                                                                >  1:7645‑M1/142‑148 (MQ=255)
                   gggCAAGGCCCATACCCTGACCCACAACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCCACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCgg                                                                                                                                <  3:262630/149‑1 (MQ=255)
                    ggCAAGGCCCATACCCTGACCCACAACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTgcg                                                                                                                                          <  3:170337/138‑1 (MQ=255)
                    ggCAAGGCCCATACCCTGACCCACAACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTgcg                                                                                                                                          >  4:170337/1‑138 (MQ=255)
                     gCAAGGCCCATACCCTGACCCACAACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCg                                                                                                                                 <  8:230855/146‑1 (MQ=255)
                     gCAAGGCCCATACCCTGACCCACAACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCg                                                                                                                                 >  7:230855/1‑146 (MQ=255)
                        aGGCCCATACCCTGACCCACAACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCTATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGAcc                                                                                                                           >  3:45587/1‑149 (MQ=255)
                          gCCCATACCCTGACCCACAACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTa                                                                                                                         >  4:265305/1‑149 (MQ=255)
                           cccATACCCTGACCCACAACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCGATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTAt                                                                                                                        <  2:116210/149‑1 (MQ=255)
                             cATACCCTGACCCACAACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATgg                                                                                                                      <  6:64039/149‑1 (MQ=255)
                             cATACCCTGACCCACAACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATgg                                                                                                                      >  1:242410/1‑149 (MQ=255)
                                aCCCTGACCCACAACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGcc                                                                                                                   >  3:226546/1‑149 (MQ=255)
                                   cTGACCCACAACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTc                                                                                                                <  6:90428/149‑1 (MQ=255)
                                      aCCCACAACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATg                                                                                                                       >  6:277155/1‑139 (MQ=255)
                                      aCCCACAACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATg                                                                                                                       <  5:277155/139‑1 (MQ=255)
                                      aCCCACAACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGAc                                                                                                             <  3:265305/149‑1 (MQ=255)
                                        ccACAACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGAcgc                                                                                                           >  3:203330/1‑149 (MQ=255)
                                         cacaACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCt                                                                                                                          >  1:80162/1‑133 (MQ=255)
                                         cacaACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCt                                                                                                                          <  2:80162/133‑1 (MQ=255)
                                          acaACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATggg                                                                                                                     <  8:315625/137‑1 (MQ=255)
                                           caACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACgcggc                                                                                                        <  1:218159/149‑1 (MQ=255)
                                                   cGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAAGAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGAt                                                                                                 <  1:327505/148‑1 (MQ=255)
                                                   cGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGAt                                                                                                 <  4:266295/148‑1 (MQ=255)
                                                   acccctcggcctggtccgcgtaatgccggtcgaacggcacgccactctgcccgaccgggttgatggtcagcgcctgcccggcatcggcaaagtcGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATc                                                                                                <  6:50527‑M1/55‑1 (MQ=255)
                                                          ggcctggtccgcgtaatgccggtcgaacggcacgccactctgcccgaccgggttgatggtcagcgcctgcccggcatcggcaaagtcGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACttt                                                                                          >  8:17663‑M1/88‑148 (MQ=255)
                                                          ggTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTg                                                                                         <  2:285685/149‑1 (MQ=255)
                                                           gcctggtccgcgtaatgccggtcgaacggcacgccactctgcccgaccgggttgatggtcagcgcctgcccggcatcggcaaagtcGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGc                                                                                        >  5:50527‑M1/87‑149 (MQ=255)
                                                            tGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGcc                                                                                       >  3:76541/1‑149 (MQ=255)
                                                              aaaaaGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGa                                                                                     >  6:298542/1‑149 (MQ=255)
                                                                aaaGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATg                                                                                   >  6:3472/1‑149 (MQ=255)
                                                                 aaGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATc                                                                                                <  5:25378/135‑1 (MQ=255)
                                                                 aaGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATc                                                                                                >  6:25378/1‑135 (MQ=255)
                                                                           aCCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGgcg                                                                        >  5:12469/1‑149 (MQ=255)
                                                                            ccTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGgcgc                                                                       >  8:158307/1‑149 (MQ=255)
                                                                            ccTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGgcgc                                                                       >  8:93575/1‑149 (MQ=255)
                                                                              tgctgTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGAt                                                                                                 <  7:301962/121‑1 (MQ=255)
                                                                              tgctgTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGAt                                                                                                 >  8:301962/1‑121 (MQ=255)
                                                                                aggTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGAc                                                                   <  1:186254/147‑1 (MQ=255)
                                                                                 tgTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGAc                                                                   >  6:155829/1‑148 (MQ=255)
                                                                                   ttCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCgg                                                                               >  6:237549/1‑134 (MQ=255)
                                                                                   ttCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCAt                                                                <  2:242410/149‑1 (MQ=255)
                                                                                     cAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATc                                                               <  5:155829/148‑1 (MQ=255)
                                                                                     cAACGTTGGGCCATTCGACGCACCCGGTACCAATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATc                                                               >  4:185612/1‑148 (MQ=255)
                                                                                      aaCGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCaa                                                             <  3:185612/149‑1 (MQ=255)
                                                                                        cGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAAcc                                                           <  2:130433/149‑1 (MQ=255)
                                                                                         gTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAAccc                                                          >  7:131743/1‑149 (MQ=255)
                                                                                         gTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACACGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAAccc                                                          >  1:113762/1‑149 (MQ=255)
                                                                                             ggCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTc                                                      <  2:121053/149‑1 (MQ=255)
                                                                                              gCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCg                                                     >  6:126618/1‑149 (MQ=255)
                                                                                                        gcACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTgg                                           >  3:319915/1‑149 (MQ=255)
                                                                                                                tACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGt                                   <  4:226546/149‑1 (MQ=255)
                                                                                                                  cccATGAAGTGCCGAACAACCTCTCGGCGAAGAGCAGCTCTGCGCCAGGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGtt                                  <  6:152496/148‑1 (MQ=255)
                                                                                                                       gAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCg                            >  4:70242/1‑149 (MQ=255)
                                                                                                                             ccGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGc                          <  6:49897/145‑1 (MQ=255)
                                                                                                                             ccGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGc                          >  5:49897/1‑145 (MQ=255)
                                                                                                                             ccGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCAtt                       <  4:45587/148‑1 (MQ=255)
                                                                                                                                 acaacGTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTAcgcg                  <  3:298772/149‑1 (MQ=255)
                                                                                                                                 acaacCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCaga                                               >  4:229784/1‑120 (MQ=255)
                                                                                                                                 acaacCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCaga                                               <  3:229784/120‑1 (MQ=255)
                                                                                                                                 acaacCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTAcgcg                  <  4:157371/149‑1 (MQ=255)
                                                                                                                                           ggCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGc          <  7:158307/147‑1 (MQ=255)
                                                                                                                                                 GATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGt  >  5:3472‑M1/1‑149 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
ACCCAGCCAGCTGGCAATGGGGCAAGGCCCATACCCTGACCCACAACCATCCGCTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGT  >  NC_002947/5890339‑5890632

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.