New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5920986	69 (1.280)	5 (0.100)	5/252	NT	7.4%	coding (1572/1674 nt)	PP_5190	type II secretion system protein
	?	NC_002947	= 5921015	59 (1.150)					coding (1601/1674 nt)	PP_5190	type II secretion system protein

TGCCAGACAGGTTCATCAGCCACCTGCCGAGCCTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAACTTGCCTTGCCCGAAAAGA  >  NC_002947/5920843‑5921132                                                                                                                                                |                                                                                                                                                   tGCCAGACAGGTTCATCAGCCACCTGCCGAGCCTGCCGCGGAACCGGTTTTCAGGGACGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGgc                                                                                                                                               >  1:94346/1‑149 (MQ=255)   ccAGACAGGTTCATCAGCCACCTGCCGAGCCTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCaggtcaa                                                                                                                                             >  6:204855‑M1/1‑142 (MQ=255)   ccAGACAGGTTCATCAGCCACCTGCCGAGCCTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGgcgc                                                                                                                                             <  1:332990/149‑1 (MQ=255)         aGGTTCATCAGCCACCTGCCGAGCCTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGcc                                                                                                                                        >  6:112702/1‑148 (MQ=255)           gTTCATCAGCCACCTGCCGAGCCTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGAt                                                                                                                                     >  1:53578/1‑149 (MQ=255)           gTTCATCAGCCACCTGCCGAGCCTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGAt                                                                                                                                     >  8:259854/1‑149 (MQ=255)            ttCATCAGCCACCTGCCGAGCCTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGAGCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATg                                                                                                                                    <  8:78841/149‑1 (MQ=255)                tcaGCCACCTGCCGAGCCTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCaggtcaaccaggccatcggc                                                                                                                                >  3:277723‑M1/1‑129 (MQ=255)                tcaGCCACCTGCCGAGCCTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCt                                                                                                                                >  1:303585/1‑149 (MQ=255)                 caGCCACCTGCCGAGCCTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATg                                                                                                                                    >  4:288248/1‑144 (MQ=255)                 caGCCACCTGCCGAGCCTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATg                                                                                                                                    <  3:288248/144‑1 (MQ=255)                   gCCACCTGCCGAGCCTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGt                                                                                                                             >  1:94069/1‑149 (MQ=255)                    ccACCTGCCGAGCCTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTACGCGCATTGATCGGACCTGATGCCGACCTGACCTGTTTCCGGCGCCAGGCGCTGGCCGATGGcaccac                                                                                                                             >  6:250315/1‑143 (MQ=255)                      aCCTGCCGAGCCTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGa                                                                                                                          >  1:185929/1‑149 (MQ=255)                            cGAGCCTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTgcg                                                                                                                    <  1:59574‑M2/149‑4 (MQ=255)                             gAGCCTTCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTgcgc                                                                                                                   >  2:94346‑M2/1‑145 (MQ=255)                               gCCTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCaggtcaaccaggccatcggccagcgcctggcgccg                                                                                                                 <  4:277723‑M1/149‑36 (MQ=255)                                 cTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGtt                                                                                                               <  3:240071/149‑1 (MQ=255)                                 cTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGtt                                                                                                               >  3:110392/1‑149 (MQ=255)                                    gcgcgGCAGCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTGGTGCCCAGGGACACCTTGCGCGCATTGATCGGCGCTGATGCCGAGCTGACCTGTTTGCGGCGGCAGGGGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTgcg                                                                                                            <  2:114226/148‑1 (MQ=255)                                    ccGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGCTCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCTGTTgcg                                                                                                            <  1:89782/149‑1 (MQ=255)                                    ccGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCaggtcaaccaggccatcggccagcgcctggcgccgcaa                                                                                                              <  5:204855‑M1/147‑39 (MQ=255)                                    ccGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTgcg                                                                                                            <  4:76721/149‑1 (MQ=255)                                    ccGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTgcg                                                                                                            >  5:198936/1‑149 (MQ=255)                                        ggCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCaggtcaaccaggccatcggccagcgcctggcgcctcaaacaggt                                                                                                        <  6:257108‑M1/149‑45 (MQ=255)                                         gCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAg                                                                                                       <  7:259854/149‑1 (MQ=255)                                          cACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTg                                                                                                              >  4:291821/1‑141 (MQ=255)                                          cACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTg                                                                                                              <  3:291821/141‑1 (MQ=255)                                           aCCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGc                                                                                                     >  7:243319/1‑149 (MQ=255)                                           aCCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGc                                                                                                     >  4:230050/1‑149 (MQ=255)                                           aCCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGc                                                                                                     <  1:18136/149‑1 (MQ=255)                                               gTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAg                                                                                                 <  8:243319/149‑1 (MQ=255)                                                     aGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGcc                                                                                           >  2:101223/1‑149 (MQ=255)                                                     aGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGc                                                                                            <  7:315579/148‑1 (MQ=255)                                                          cgcACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTgg                                                                                      <  5:134990/149‑1 (MQ=255)                                                           gcACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTggg                                                                                     >  6:294984/1‑149 (MQ=255)                                                             aCGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTggg                                                                                     >  5:189972/1‑147 (MQ=255)                                                                 gATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGAcc                                                                               >  7:234245/1‑149 (MQ=255)                                                                     attCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGt                                                                            <  6:195749/148‑1 (MQ=255)                                                                      ttCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGc                                                                          >  5:272388/1‑149 (MQ=255)                                                                      ttCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGc                                                                          <  2:185929/149‑1 (MQ=255)                                                                         gAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGa                                                                       <  6:189972/149‑1 (MQ=255)                                                                         gAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGa                                                                       <  2:234266/149‑1 (MQ=255)                                                                               cTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGCCCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGaa                                                                   <  3:213746/147‑1 (MQ=255)                                                                                tCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGtg                                                                >  7:13052/1‑149 (MQ=255)                                                                                    gCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGtgctgc                                                            <  4:110392/149‑1 (MQ=255)                                                                                     cccAGCGACACCTTGCGGGCATTGATCTGCCATGATGCCGACCTGACCTGTTTGCGGCGACAGGAGCTGGCCGATGGCATGGTTGAGCTGCGCCGTTGCGGCGAGGCCAATGTGGCCGCTGGGCATACCCGTGCCGAGGAAGtgctgc                                                            <  6:272388/148‑1 (MQ=255)                                                                                     cccAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGACTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGCCCCGTGCCGAGGAAGTGCTgcg                                                           >  2:268748/1‑149 (MQ=255)                                                                                      ccAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTgcgc                                                          >  2:19003/1‑149 (MQ=255)                                                                                        aGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGt                                                        >  2:258805/1‑149 (MQ=255)                                                                                          cGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGTCGAGGAAGTGCTGCGCGTCt                                                      <  2:303585/149‑1 (MQ=255)                                                                                          cGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGCCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCt                                                      <  1:258805/149‑1 (MQ=255)                                                                                           gACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTg                                                     <  2:59574/149‑1 (MQ=255)                                                                                               ccTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAAc                                                 <  3:72967/149‑1 (MQ=255)                                                                                                   gcgcgcATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGa                                              <  1:19003/148‑1 (MQ=255)                                                                                                         aTTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAg                                       >  2:238225/1‑149 (MQ=255)                                                                                                             aTCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGTCCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTcc                                    <  1:238225/148‑1 (MQ=255)                                                                                                             aTCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTcc                                    <  2:264002/148‑1 (MQ=255)                                                                                                             aTCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCt                                   >  5:338944/1‑149 (MQ=255)                                                                                                                ggCCCTGATGCCGACCTGACCTGGTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGAGCTGCGCGTCTGCAACTGACGAAAAGTCCttt                                 <  6:182749/148‑1 (MQ=255)                                                                                                                   ccTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTAt                             >  6:134976/1‑149 (MQ=255)                                                                                                                   ccTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTAt                             >  6:18916/1‑149 (MQ=255)                                                                                                                   ccTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTAt                             >  8:136195/1‑149 (MQ=255)                                                                                                                   ccTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTAt                             >  5:38924/1‑149 (MQ=255)                                                                                                                     tGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTAtt                            >  3:7271/1‑148 (MQ=255)                                                                                                                      gATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTc                           >  1:316566/1‑148 (MQ=255)                                                                                                                          ccGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAgg                       <  5:112702/148‑1 (MQ=255)                                                                                                                           cGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCt                                                      <  8:307289/116‑1 (MQ=255)                                                                                                                            gacctgacctGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAAc                    <  8:234245/149‑1 (MQ=255)                                                                                                                            gacctgacctGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAAc                    <  4:7271/149‑1 (MQ=255)                                                                                                                                 gacctgTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAActtgcc               >  8:59697/1‑149 (MQ=255)                                                                                                                                  acctgTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAActtgc                <  2:53578/147‑1 (MQ=255)                                                                                                                                  acctgTTTGAGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTgcgccgcaaacaggtcaggtcggcatcagggccgatcaatgcgcgcaaggtgtcgctgggctcgagcagttcgaataatcccgtgcgcccctgaaaaccggtgcc              <  6:257108‑M2/149‑106 (MQ=255)                                                                                                                                       tttGCGGCGCCAGGCGCTGGCCGATGGCCTTGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTTCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAACTTGCCTTGccc         <  2:94069/149‑1 (MQ=255)                                                                                                                                       tttGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCATCTGACGAAAAGTCCTTAGTATTCAAGGAACTTGCCTTGccc         >  5:137289/1‑149 (MQ=255)                                                                                                                                       tttGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAACttgccttgcc          <  3:164730/148‑1 (MQ=255)                                                                                                                                       tttGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAACttgccttgcc          <  1:101223/148‑1 (MQ=255)                                                                                                                                       tttGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAACTTGCCTTGccc         >  6:152217/1‑149 (MQ=255)                                                                                                                                        ttGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTgcgccgcaaacaggtcaggtcggcatcagggccgatcaatgcgcgcaaggtgtcgctgggctcgagcagttcgaataatcccgtgcgcccctgaaaaccggtgccgcgg          <  5:204855‑M2/147‑110 (MQ=255)                                                                                                                                           cggcgCCAGGCGCTGGCCGATGGCCTGGTTGACCTgcgccgcaaacaggtcaggtcggcatcagggccgatcaatgcgcgcaaggtgtcgctgggctcgagcagttcgaataatcccgtgcgcccctgaaaaccggtgccgcggcaggc     <  4:277723‑M2/149‑115 (MQ=255)                                                                                                                                             gcgcaggtcaaccaggccatcggccagcgcctggcgccgcaaacaggtcaggtcggcatcagggccgatcaatgcgcgcaaggtgtcgctgggctcgagcagttcgaataatcccgtgcgcccctgaaaaccggtgccgcggaaggctc   >  2:94346‑M1/1‑4 (MQ=255)                                                                                                                                              cgcaggtcaaccaggccatcggccagcgcctggcgccgcaaacaggtcaggtcggcatcagggccgatcaatgcgcgcaaggtgtcgctgggctcgagcagttcgaataatcccgtgcgcccctgaaaaccggtgccgcggcaggctcg  <  1:59574‑M1/149‑147 (MQ=255)                                                                                                                                                |                                                                                                                                                   TGCCAGACAGGTTCATCAGCCACCTGCCGAGCCTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAACTTGCCTTGCCCGAAAAGA  >  NC_002947/5920843‑5921132

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.