New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5920986	69 (1.280)	5 (0.100)	5/252	NT	7.4%	coding (1572/1674 nt)	PP_5190	type II secretion system protein
	?	NC_002947	= 5921015	59 (1.150)					coding (1601/1674 nt)	PP_5190	type II secretion system protein

CGAGCCTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAACTTGCCTTGCCCGAAAAGATCCAAGCGCGCATCTTCAACCATCACCCTT  >  NC_002947/5920870‑5921162                                                                                                                                                  |                                                                                                                                                    cGAGCCTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTgcg                                                                                                                                                  <  1:59574‑M2/149‑4 (MQ=255)  gAGCCTTCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTgcgc                                                                                                                                                 >  2:94346‑M2/1‑145 (MQ=255)      cTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGtt                                                                                                                                             <  3:240071/149‑1 (MQ=255)      cTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGtt                                                                                                                                             >  3:110392/1‑149 (MQ=255)         gcgcgGCAGCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTGGTGCCCAGGGACACCTTGCGCGCATTGATCGGCGCTGATGCCGAGCTGACCTGTTTGCGGCGGCAGGGGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTgcg                                                                                                                                          <  2:114226/148‑1 (MQ=255)         ccGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGCTCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCTGTTgcg                                                                                                                                          <  1:89782/149‑1 (MQ=255)         ccGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTgcg                                                                                                                                          >  5:198936/1‑149 (MQ=255)         ccGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTgcg                                                                                                                                          <  4:76721/149‑1 (MQ=255)              gCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAg                                                                                                                                     <  7:259854/149‑1 (MQ=255)               cACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTg                                                                                                                                            >  4:291821/1‑141 (MQ=255)               cACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTg                                                                                                                                            <  3:291821/141‑1 (MQ=255)                aCCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGc                                                                                                                                   <  1:18136/149‑1 (MQ=255)                aCCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGc                                                                                                                                   >  7:243319/1‑149 (MQ=255)                aCCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGc                                                                                                                                   >  4:230050/1‑149 (MQ=255)                    gTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAg                                                                                                                               <  8:243319/149‑1 (MQ=255)                          aGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGcc                                                                                                                         >  2:101223/1‑149 (MQ=255)                          aGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGc                                                                                                                          <  7:315579/148‑1 (MQ=255)                               cgcACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTgg                                                                                                                    <  5:134990/149‑1 (MQ=255)                                gcACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTggg                                                                                                                   >  6:294984/1‑149 (MQ=255)                                  aCGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTggg                                                                                                                   >  5:189972/1‑147 (MQ=255)                                      gATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGAcc                                                                                                             >  7:234245/1‑149 (MQ=255)                                          attCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGt                                                                                                          <  6:195749/148‑1 (MQ=255)                                           ttCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGc                                                                                                        >  5:272388/1‑149 (MQ=255)                                           ttCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGc                                                                                                        <  2:185929/149‑1 (MQ=255)                                              gAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGa                                                                                                     <  2:234266/149‑1 (MQ=255)                                              gAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGa                                                                                                     <  6:189972/149‑1 (MQ=255)                                                    cTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGCCCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGaa                                                                                                 <  3:213746/147‑1 (MQ=255)                                                     tCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGtg                                                                                              >  7:13052/1‑149 (MQ=255)                                                         gCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGtgctgc                                                                                          <  4:110392/149‑1 (MQ=255)                                                          cccAGCGACACCTTGCGGGCATTGATCTGCCATGATGCCGACCTGACCTGTTTGCGGCGACAGGAGCTGGCCGATGGCATGGTTGAGCTGCGCCGTTGCGGCGAGGCCAATGTGGCCGCTGGGCATACCCGTGCCGAGGAAGtgctgc                                                                                          <  6:272388/148‑1 (MQ=255)                                                          cccAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGACTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGCCCCGTGCCGAGGAAGTGCTgcg                                                                                         >  2:268748/1‑149 (MQ=255)                                                           ccAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTgcgc                                                                                        >  2:19003/1‑149 (MQ=255)                                                             aGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGt                                                                                      >  2:258805/1‑149 (MQ=255)                                                               cGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGTCGAGGAAGTGCTGCGCGTCt                                                                                    <  2:303585/149‑1 (MQ=255)                                                               cGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGCCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCt                                                                                    <  1:258805/149‑1 (MQ=255)                                                                gACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTg                                                                                   <  2:59574/149‑1 (MQ=255)                                                                    ccTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAAc                                                                               <  3:72967/149‑1 (MQ=255)                                                                        gcgcgcATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGa                                                                            <  1:19003/148‑1 (MQ=255)                                                                              aTTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAg                                                                     >  2:238225/1‑149 (MQ=255)                                                                                  aTCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGTCCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTcc                                                                  <  1:238225/148‑1 (MQ=255)                                                                                  aTCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTcc                                                                  <  2:264002/148‑1 (MQ=255)                                                                                  aTCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCt                                                                 >  5:338944/1‑149 (MQ=255)                                                                                     ggCCCTGATGCCGACCTGACCTGGTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGAGCTGCGCGTCTGCAACTGACGAAAAGTCCttt                                                               <  6:182749/148‑1 (MQ=255)                                                                                        ccTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTAt                                                           >  8:136195/1‑149 (MQ=255)                                                                                        ccTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTAt                                                           >  6:18916/1‑149 (MQ=255)                                                                                        ccTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTAt                                                           >  6:134976/1‑149 (MQ=255)                                                                                        ccTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTAt                                                           >  5:38924/1‑149 (MQ=255)                                                                                          tGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTAtt                                                          >  3:7271/1‑148 (MQ=255)                                                                                           gATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTc                                                         >  1:316566/1‑148 (MQ=255)                                                                                               ccGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAgg                                                     <  5:112702/148‑1 (MQ=255)                                                                                                cGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCt                                                                                    <  8:307289/116‑1 (MQ=255)                                                                                                 gacctgacctGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAAc                                                  <  8:234245/149‑1 (MQ=255)                                                                                                 gacctgacctGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAAc                                                  <  4:7271/149‑1 (MQ=255)                                                                                                      gacctgTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAActtgcc                                             >  8:59697/1‑149 (MQ=255)                                                                                                       acctgTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAActtgc                                              <  2:53578/147‑1 (MQ=255)                                                                                                       acctgTTTGAGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTgcgccgcaaacaggtcaggtcggcatcagggccgatcaatgcgcgcaaggtgtcgctgggctcgagcagttcgaataatcccgtgcgcccctgaaaaccggtgcc                                            <  6:257108‑M2/149‑106 (MQ=255)                                                                                                            tttGCGGCGCCAGGCGCTGGCCGATGGCCTTGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTTCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAACTTGCCTTGccc                                       <  2:94069/149‑1 (MQ=255)                                                                                                            tttGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCATCTGACGAAAAGTCCTTAGTATTCAAGGAACTTGCCTTGccc                                       >  5:137289/1‑149 (MQ=255)                                                                                                            tttGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAACttgccttgcc                                        <  3:164730/148‑1 (MQ=255)                                                                                                            tttGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAACttgccttgcc                                        <  1:101223/148‑1 (MQ=255)                                                                                                            tttGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAACTTGCCTTGccc                                       >  6:152217/1‑149 (MQ=255)                                                                                                             ttGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTgcgccgcaaacaggtcaggtcggcatcagggccgatcaatgcgcgcaaggtgtcgctgggctcgagcagttcgaataatcccgtgcgcccctgaaaaccggtgccgcgg                                        <  5:204855‑M2/147‑110 (MQ=255)                                                                                                                cggcgCCAGGCGCTGGCCGATGGCCTGGTTGACCTgcgccgcaaacaggtcaggtcggcatcagggccgatcaatgcgcgcaaggtgtcgctgggctcgagcagttcgaataatcccgtgcgcccctgaaaaccggtgccgcggcaggc                                   <  4:277723‑M2/149‑115 (MQ=255)                                                                                                                         gcgcTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTc                                                         <  6:21867/118‑1 (MQ=255)                                                                                                                         gcgcTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTc                                                         >  5:21867/1‑118 (MQ=255)                                                                                                                               gCCGATGGCCTGGTTGACCTgcgccgcaaacaggtcaggtcggcatcagggccgatcaatgcgcgcaaggtgtcgctgggctcgagcagttcgaataatcccgtgcgcccctgaaaaccggtgccgcggcaggctcggcaggtggctga                    >  3:277723‑M2/1‑20 (MQ=255)                                                                                                                                 cGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGaaaa                                                                      <  4:274988/97‑1 (MQ=255)                                                                                                                                 cGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGaaaa                                                                      >  3:274988/1‑97 (MQ=255)                                                                                                                                  gATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAACTTGCCTTGCCCGAAAAGATCCAAGCGCGCATCt                 >  8:71524/1‑149 (MQ=255)                                                                                                                                    tGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAACTTGCCTTGCCCGAAAAGATCCAAGCGCGCATCTTc               <  5:152217/149‑1 (MQ=255)                                                                                                                                       ccTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCttt                                                               >  2:833/1‑98 (MQ=255)                                                                                                                                       ccTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAACTTGCCTTGCCCGAAAAGATCCAAGCGCGCATCTTCAAc            >  1:272550/1‑149 (MQ=255)                                                                                                                                        cTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAACTTGCCTTGCCCGAAAAGATCCAAGCGCGCATCTTCAAcc           <  2:316566/149‑1 (MQ=255)                                                                                                                                            ttGACCTgcgccgcaaacaggtcaggtcggcatcagggccgatcaatgcgcgcaaggtgtcgctgggctcgagcagttcgaataatcccgtgcgcccctgaaaaccggtgccgcggcaggctcggcaggtggctgatgaacctgtctgg       >  6:204855‑M2/1‑7 (MQ=255)                                                                                                                                                 cTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAACTTGCCTTGCCCGAAAAGATCCAAGCGCGCATCTTCAACCATCACCCtt  >  6:41951/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                    CGAGCCTGCCGCGGCACCGGTTTTCAGGGGCGCACGGGATTATTCGAACTGCTCGAGCCCAGCGACACCTTGCGCGCATTGATCGGCCCTGATGCCGACCTGACCTGTTTGCGGCGCCAGGCGCTGGCCGATGGCCTGGTTGACCTGCGCCGTTGCGGCGAGGCCAAGGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGACGAAAAGTCCTTTGTATTCAAGGAACTTGCCTTGCCCGAAAAGATCCAAGCGCGCATCTTCAACCATCACCCTT  >  NC_002947/5920870‑5921162

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.