New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1109505	44 (0.820)	4 (0.080)	4/256	NT	7.9%	coding (171/651 nt)	PP_0969	GntR family transcriptional regulator
	?	NC_002947	= 1109543	50 (0.960)					coding (209/651 nt)	PP_0969	GntR family transcriptional regulator

CGATTGGCAGGTCGGTCAGCGCCTGCCTACCGAGCCAGAGCTTGCCTTGCAGCTGGGCATCAGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTCGGGCTGGCGGCCTTGCGCCGTACCGATGCCGACCTGCA  >  NC_002947/1109409‑1109690                                                                                                                                       |                                                                                                                                                    cGATTGGCAGGTCGGTCAGCGCCTGCCTACCGAGCCAGAGCTTGCCTTGCAGCTGGGCATCAGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGGTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCa                                                                                                                                       <  6:320312/149‑1 (MQ=255)  gATTGGCAGGTCGGTCAGCGCCTGCCTACCGAGCCAGAGCTTGCCTTGCAGCTGGGCATCAGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTAc                                                                                                                                              >  1:183495/1‑141 (MQ=255)  gATTGGCAGGTCGGTCAGCGCCTGCCTACCGAGCCAGAGCTTGCCTTGCAGCTGGGCATCAGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTAc                                                                                                                                              <  2:183495/141‑1 (MQ=255)       gCAGGTCGGTCAGCGCCTGCCTACCGAGCCAGAGCTTGCCTTGCAGCTGGGCATCAGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGcc                                                                                                                                  >  3:299071/1‑148 (MQ=255)       gCAGGTCGGTCAGCGCCTGCCTACCGAGCCAGAGCTTGCCTTGCAGCTGGGCATCAGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAAATCGCCAGGGCGACGGCAGCTACCTGCGCACTGcc                                                                                                                                  >  1:278577/1‑148 (MQ=255)           gtcggtcAGCGCCTGCCTACCGAGCCAGAGCTTGCCTTGCAGCTGGGCATCAGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGa                                                                                                                             >  3:259176/1‑149 (MQ=255)              ggtcAGCGCCTGCCTACCGAGCCAGAGCTTGCCTTGCAGCTGGGCATCAGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGAccc                                                                                                                          >  2:289658/1‑149 (MQ=255)                tcAGCGCCTGCCTACCGAGCCAGAGCTTGCCTTGCAGCTGGGCATCAGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGc                                                                                                                        >  5:280217/1‑149 (MQ=255)                   gcgcCTGCCTACCGAGCCAGAGCTTGCCTTGCAGCTGGGCATCAGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTg                                                                                                                      >  4:256674/1‑148 (MQ=255)                              ccGAGCCAGAGCTTGCCTTGCAGCTGGGCATCAGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGc                                                                                                                     >  2:297588/1‑138 (MQ=255)                               cGAGCCAGAGCTTGCCTTGCAGCTGGGCATCAGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCgg                                                                                                               >  8:305066/1‑143 (MQ=255)                               cGAGCCAGAGCTTGCCTTGCAGCTGGGCATCAGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCgg                                                                                                               <  7:305066/143‑1 (MQ=255)                               cGAGCCAGAGCTTGCCTTGCAGCTGGGCATCAGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCAcg                                                                                                         >  8:82052/1‑149 (MQ=255)                                           tgccttgcAGCTGGGCATCAGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGgt                                                                                             >  3:40833/1‑149 (MQ=255)                                            gccttgcAGCTGGGCATCAGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGgt                                                                                             <  4:299071/148‑1 (MQ=255)                                             ccttgcAGCTGGGCATCAGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGgtgt                                                                                           <  4:196684/149‑1 (MQ=255)                                                          cATCAGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAgg                                                                              <  6:280217/149‑1 (MQ=255)                                                              aGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCa                                                                                                           <  3:294393/116‑1 (MQ=255)                                                              aGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCa                                                                                                           >  4:294393/1‑116 (MQ=255)                                                                  gCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAg                                                                                  <  4:238242/137‑1 (MQ=255)                                                                  gCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAgatcgga                                                                         >  3:238242/1‑140 (MQ=255)                                                                  gCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGa                                                                       >  5:105534/1‑148 (MQ=255)                                                                  gCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGa                                                                       >  4:225420/1‑148 (MQ=255)                                                                       acCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCg                                                                 <  4:259176/149‑1 (MQ=255)                                                                              gtgAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCACCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATAtt                                                          >  6:197857/1‑149 (MQ=255)                                                                                gAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCACTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATtct                                                        >  8:242538/1‑149 (MQ=255)                                                                                   gCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCAGGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATtctc                                                       >  1:278043/1‑147 (MQ=255)                                                                                   gCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATtctc                                                       >  6:336394/1‑147 (MQ=255)                                                                                     cATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAgg                                                   <  4:40833/149‑1 (MQ=255)                                                                                     cATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAgg                                                   <  3:256674/149‑1 (MQ=255)                                                                                      aTGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGcagctacctgcgcatggcctcacgcacggtgttgcggctgatgcccagctgcaaggcaagctctggctcg                                                                               <  2:101535‑M2/120‑71 (MQ=255)                                                                                          gcgTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGcagcacgcgcatggcctcacgcacggtgttgcggctgatgcccagctgcaaggcaagctctggctcggtaggcaggcgctgaccgacctgccaatcgcccaa                                               <  6:122309‑M2/148‑103 (MQ=255)                                                                                          gcgTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAg                                              <  7:137654/149‑1 (MQ=255)                                                                                             tGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGcagcacgcgcatggcctcacgcacggtgttgcggctgatgcccagctgcaaggcaagctctggctcggtaggcaggcgctgaccgacctgccaatcgcccaacac                                            <  1:257822‑M2/148‑106 (MQ=255)                                                                                               cTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGcagcacgcgcatggcctcacgcacggtgttgcggctgatgcccagctgcaaggcaagctctggctcggtaggcaggcgctgaccgacctgccaatcgcccaacacga                                          >  5:122309‑M2/1‑41 (MQ=255)                                                                                                tGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTc                                        >  8:303074/1‑149 (MQ=255)                                                                                                  gCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTCgg                                      >  6:319654/1‑149 (MQ=255)                                                                                                        aGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTCGGGCTggc                                >  2:311229/1‑149 (MQ=255)                                                                                                            gCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGATCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTCGGGCTGGCGGcc                            >  4:234487/1‑149 (MQ=255)                                                                                                              cTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTCGGGCTGGCGGCCtt                          >  8:304398/1‑149 (MQ=255)                                                                                                                 gtggAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTCGGGCTGGCGGCCTTgcg                       <  6:105534/149‑1 (MQ=255)                                                                                                                 gtggAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTCGGGCTGGCGGCCTTgc                        <  1:311229/148‑1 (MQ=255)                                                                                                                    gAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCg                                                                 >  7:170646/1‑104 (MQ=255)                                                                                                                    gAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCg                                                                 <  8:170646/104‑1 (MQ=255)                                                                                                                      aaTTCGCCAGGGCGACGGCAGCTACCTGCGCTCTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTCGGGCTGGCGGCCTTGCGCCGTa                  <  5:77490/149‑1 (MQ=255)                                                                                                                       aTTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTCGGGCTGGCGGCCTTGCGCCGTAc                 >  3:259094/1‑149 (MQ=255)                                                                                                                        ttCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTCGGGCTGGCGGCCTTGCGCCGTAcc                >  3:90573/1‑149 (MQ=255)                                                                                                                           gCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTCGGGCTGGCGGCCTTGCGCCGTACCGAt             <  1:289658/149‑1 (MQ=255)                                                                                                                           gCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTCGGGCTGGCGGCCTTGCGCCGTACCGAt             >  8:172222/1‑149 (MQ=255)                                                                                                                           gCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTCGGGCTGGCGGCCTTGCGCCGTACCGAt             >  1:164999/1‑149 (MQ=255)                                                                                                                            ccAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGCCAGCCCGACGGCCtc                          <  4:312589/135‑2 (MQ=255)                                                                                                                            ccAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGCCAGCCCGACGGCCtc                          >  3:312589/1‑134 (MQ=255)                                                                                                                                ggCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTCGGGCTGGCGGCCTTGCGCCGTACCGATGCCGa        >  6:130897/1‑149 (MQ=255)                                                                                                                                 gCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTCGGGCTGGCGGCCTTGCGCCGTACCGATGCCGAc       <  7:304398/149‑1 (MQ=255)                                                                                                                                 gCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTCGGGCTGGCGGCCTTGCGCCGTACCCATGCCGAc       >  6:271320/1‑149 (MQ=255)                                                                                                                                 gCGACGGCAGCTACCTGCGCACTGCCCAGGACCCACTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTCGGGCTGGCGGCCTTGCGCCGTACCGATGCCGAc       <  7:242538/149‑1 (MQ=255)                                                                                                                                   gACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTCGGGCTGGCGGCCTTGCGCCGTACCGATGCCGACCt     <  4:90573/149‑1 (MQ=255)                                                                                                                                     cGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTCGGGCTGGCGGCCTTGCGCCGTACCGATGCCGACCTg    >  7:158819/1‑148 (MQ=255)                                                                                                                                      ggcagcacgcgcatggcctcacgcacggtgttgcggctgatgcccagctgcaaggcaagctctggctcggtaggcaggcgctgaccgacctgccaatcgcccaacacgatgcattcgcgcatgcgctctaccgccaactccaccaggga  >  2:257822‑M2/1‑2 (MQ=255)                                                                                                                                       |                                                                                                                                                    CGATTGGCAGGTCGGTCAGCGCCTGCCTACCGAGCCAGAGCTTGCCTTGCAGCTGGGCATCAGCCGCAACACCGTGCGTGAGGCCATGCGCGTGCTGGCGTTCAGTGGCCTGGTGGAAATTCGCCAGGGCGACGGCAGCTACCTGCGCACTGCCCAGGACCCGCTGCAGGCGGTGCACGCGATGTCCCGGTGTACGCCCGAGCAGGCCCGTGAAACCCGCCATATTCTCGAGGCGGAGGCCGTCGGGCTGGCGGCCTTGCGCCGTACCGATGCCGACCTGCA  >  NC_002947/1109409‑1109690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.