New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1312979	45 (0.840)	6 (0.120)	5/250	NT	11.6%	coding (1678/2847 nt)	rapA	RNA polymerase‑associated protein RapA
	?	NC_002947	= 1313030	49 (0.960)					coding (1627/2847 nt)	rapA	RNA polymerase‑associated protein RapA

CAACTGGATAGTGTGCTTCTGGCCGATCCGGTCAAGGCGGCCGATGCGCTGTTCGAGCAGGTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAGGGCGTCTTCCAGGTCCATGGCGGTTTCGGCGTGGG  >  NC_002947/1312884‑1313176                                                                                                                                                   |                                                                                                                                                   cAACTGGATAGTGTGCTTCTGGCCGATCCGGTCAAGGCGGCCGATGCGCTGTTCGAGCAGGTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGca                                                                                                                                                  <  5:37387‑M2/149‑3 (MQ=255) cAACTGGATAGTGTGCTTCTGGCCGATCCGGTCAAGGCGGCCGATGCGCTGTTCGAGCAGGTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGca                                                                                                                                                  <  3:36100‑M2/149‑3 (MQ=255)  aaCTGGATAGTGTGCTTCTGGCCGATCCGGTCAAGGCGGCCGATGCGCTGTTCGAGCAGGTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAg                                                                                                                                                    <  1:142793/146‑1 (MQ=255)  aaCTGGATAGTGTGCTTCTGGCCGATCCGGTCAAGGCGGCCGATGCGCTGTTCGAGCAGGTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAg                                                                                                                                                    >  2:142793/1‑146 (MQ=255)  aaCTGGATAGTGTGCTTCTGGCCGATCCGGTCAAGGCGGCCGATGCGCTGTTCGAGCAGGTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGcac                                                                                                                                                 <  1:245093‑M2/149‑4 (MQ=255)  aaCTGGATAGTGTGCTTCTGGCCGATCCGGTCAAGGCGGCCGATGCGCTGTTCGAGCAGGTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGcac                                                                                                                                                 >  4:36100‑M2/1‑146 (MQ=255)  aaCTGGATAGTGTGCTTCTGGCCGATCCGGTCAAGGCGGCCGATGCGCTGTTCGAGCAGGTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGcac                                                                                                                                                 <  8:143813‑M2/149‑4 (MQ=255)       gATAGTGTGCTTCTGGCCGATCCGGTCAAGGCGGCCGATGCGCTGTTCGAGCAGGTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGcacctgg                                                                                                                                             >  7:143813‑M2/1‑141 (MQ=255)            tgtgCTTCTGGCCGATCCGGTCAAGGCGGCCGATGCGCTGTTCGAGCAGGTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGcc                                                                                                                                        >  1:71133/1‑148 (MQ=255)                      gCCGATCCGGTCAAGGCGGCCGATGCGCTGTTCGAGCAGGTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCAt                                                                                                                             >  1:327731/1‑149 (MQ=255)                       ccGATCCGGTCAAGGCGGCCGATGCGCTGTTCGAGCAGGTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATc                                                                                                                            >  6:229490/1‑149 (MQ=255)                       ccGATCCGGTCAAGGCGGCCGATGCGCTGTTCGAGCAGGTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATc                                                                                                                            >  8:108055/1‑149 (MQ=255)                                  aaGGCGGCCGATGCGCTGTTCGAGCAGGTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAgg                                                                                                                 <  6:37387/149‑1 (MQ=255)                                        gcCGATGCGCTGTTCGAGCAGGTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCgg                                                                                                           >  4:240463/1‑149 (MQ=255)                                           gATGCGCTGTTCGAGCAGGTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCAc                                                                                                        <  3:240463/149‑1 (MQ=255)                                               cgcTGTTCGAGCAGGTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTc                                                                                                    >  2:241312/1‑149 (MQ=255)                                                gcTGTTCGAGCAGGTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAg                                                                                                              <  5:68591/138‑1 (MQ=255)                                                gcTGTTCGAGCAGGTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAg                                                                                                              >  6:68591/1‑138 (MQ=255)                                                      cGAGCAGGTCGGGGTGCGCCGGCAGTTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTc                                                                                              <  8:29624/148‑1 (MQ=255)                                                             gTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGc                                                                                      >  2:329251/1‑149 (MQ=255)                                                              tCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCt                                                                                     >  3:120055/1‑149 (MQ=255)                                                                 gggTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCAt                                                                                  <  1:329251/149‑1 (MQ=255)                                                                          ggCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATg                                                                         <  3:273774/149‑1 (MQ=255)                                                                             aGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGaa                                                                      <  8:148574/149‑1 (MQ=255)                                                                              ggTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAac                                                                     <  6:232945/149‑1 (MQ=255)                                                                               gTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGaa                                                                      <  2:34325/147‑1 (MQ=255)                                                                               gTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGaa                                                                      >  1:34325/1‑147 (MQ=255)                                                                                  gAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACAcc                                                                  >  7:101413/1‑148 (MQ=255)                                                                                  gAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACCGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACAcc                                                                  >  1:115148/1‑148 (MQ=255)                                                                                      aTCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGcacctggtgatgttcgacctgccggcgcaccccgacctgctcgaacagcgcatcggccgccttgaccggatcggccagaagcacac                                                              <  7:64180‑M2/148‑87 (MQ=255)                                                                                      aTCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGcacctggtgatgttcgacctgccggcgcaccccgacctgctcgaacagcgcatcggccgccttgaccggatcggccagaagcacac                                                              <  6:131597‑M2/148‑87 (MQ=255)                                                                                          ccAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAgg                                                                                          >  4:119696/1‑116 (MQ=255)                                                                                          ccAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAgg                                                                                          <  3:119696/116‑1 (MQ=255)                                                                                          ccAGGTGATGAGCGAACGGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCg                                                           <  5:94548/147‑1 (MQ=255)                                                                                          ccAGGTGATGAGCGAACAGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCg                                                           >  6:94548/1‑147 (MQ=255)                                                                                           cAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGcacctggtgatgttcgacctgccggcgcaccccgacctgctcgaacagcgcatcggccgccttgaccggatcggccagaagcacactatc                                                          <  6:335755‑M2/147‑91 (MQ=255)                                                                                            aGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCAGGGAt                                                       >  5:320925/1‑149 (MQ=255)                                                                                                  tgaGCGAAGTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGa                                                 <  5:346273/149‑1 (MQ=255)                                                                                                   gaGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAg                                                >  5:26014/1‑149 (MQ=255)                                                                                                        aaCTGGAAGTTGCGGCCTTCGCTGCCTATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCAc                                           >  1:8779/1‑149 (MQ=255)                                                                                                          cTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCAcgc                                         <  4:270191/149‑1 (MQ=255)                                                                                                          cTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCAcgc                                         <  2:115148/149‑1 (MQ=255)                                                                                                           tGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCAcgcg                                        >  3:328988/1‑149 (MQ=255)                                                                                                            ggAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAg                                                                                                                     <  4:201680/71‑1 (MQ=255)                                                                                                            ggAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAg                                                                                                                     >  3:201680/1‑71 (MQ=255)                                                                                                               aGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAgg                                    >  5:135324/1‑149 (MQ=255)                                                                                                                  tGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGcacctggtgatgttcgacctgccggcgcaccccgacctgctcgaacagcgcatcggccgccttgaccggatcggccagaagcacactatccagttgcacatcccgtacctgcag                                  >  8:64180‑M2/1‑34 (MQ=255)                                                                                                                       ccTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAGGGCGTCTTc                            <  2:245093/149‑1 (MQ=255)                                                                                                                        cTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAGGGCGTCTTcc                           <  5:229490/149‑1 (MQ=255)                                                                                                                        cTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAGGGCGTCTTcc                           <  7:108055/149‑1 (MQ=255)                                                                                                                         ttCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAGGGCGTCTTc                            >  7:197305/1‑147 (MQ=255)                                                                                                                              tGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAGGGCGTCTTCCAGGTc                      >  8:100392/1‑148 (MQ=255)                                                                                                                               gCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGCGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAGGGCGTCTTCCAGGTCCa                    >  6:279107/1‑149 (MQ=255)                                                                                                                               gCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAGGGCGTCTTCCAGGTCCa                    >  5:222136/1‑149 (MQ=255)                                                                                                                                ccGATTTCCGAGCAGATCAGCACCTGGGCGTCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAGGGCGTCTTCCAGGTCCAt                   >  6:31204/1‑149 (MQ=255)                                                                                                                                 cGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAGGGCGTCTTCCAGGTCCATg                  >  3:21368/1‑149 (MQ=255)                                                                                                                                   aTTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAGGGCGTCTTCCAGGTCCATgg                 <  4:84223/148‑1 (MQ=255)                                                                                                                                   aTTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAGGGCGTCTTCCAGGTCCATgg                 >  3:84223/1‑148 (MQ=255)                                                                                                                                        cGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAGGGCGTCTTc                            >  4:288903/1‑132 (MQ=255)                                                                                                                                        cGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAGGGCGTCTTc                            <  3:288903/132‑1 (MQ=255)                                                                                                                                           gCAGATCAGcacctggtgatgttcgacctgccggcgcaccccgacctgctcgaacagcgcatcggccgccttgaccggatcggccagaagcacactatccagttgcacatcccgtacctgcaggacagcccgcaagagcgcctgttcca        >  5:335755‑M2/1‑9 (MQ=255)                                                                                                                                            cAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAGGGCGTCTTCCAGGTCCATGGCGGTTTCGGc       >  1:159749/1‑149 (MQ=255)                                                                                                                                            cAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAGGGCGTCTTCCAGGTCCATGGCGGTTTCGGc       <  8:197305/149‑1 (MQ=255)                                                                                                                                             aGATCAGcacctggtgatgttcgacctgccggcgcaccccgacctgctcgaacagcgcatcggccgccttgaccggatcggccagaagcacactatccagttgcacatcccgtacctgcaggacagcccgcaagagcgcctgttccagt      >  5:131597‑M2/1‑7 (MQ=255)                                                                                                                                                tCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAGGGCGTCTTCCAGGTCCATGGCGGTTTCGGCGTgg   <  6:26014/149‑1 (MQ=255)                                                                                                                                                tCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAGGGCGTCTTCCAGGTCCATGGCGGTTTCGGCGTgg   <  6:135324/149‑1 (MQ=255)                                                                                                                                                  aGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAGGGCGTCTTCCAGGTCCATGGCGGTTTCGGCGTggg  <  2:327731/148‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                   CAACTGGATAGTGTGCTTCTGGCCGATCCGGTCAAGGCGGCCGATGCGCTGTTCGAGCAGGTCGGGGTGCGCCGGCAGGTCGAACATCACCAGGTGATGAGCGAACTGGAAGTTGCGGCCTTCGCTGCCGATTTCCGAGCAGATCAGCACCTGGGCGCCAAACTCTTCATCGGCAAAGTAGGCAGCGGCACGGTCGCGCTCGAGGATGCTCATGCCTTCATGGAACACCGAGGCCGGGATGCCGGAGCGCACGCGCAGGGCGTCTTCCAGGTCCATGGCGGTTTCGGCGTGGG  >  NC_002947/1312884‑1313176

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.