New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1413680	59 (1.100)	4 (0.080)	4/258	NT	6.3%	coding (217/474 nt)	PP_1235	AhpC/TSA family protein
	?	NC_002947	= 1413722	61 (1.160)					coding (175/474 nt)	PP_1235	AhpC/TSA family protein

GCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGTTCGGCAAGGCTGACGGTTTGCCCGCTGGTGGCCTGGGCCTGGAAGTCGG  >  NC_002947/1413578‑1413868                                                                                                                                                 |                                                                                                                                                   gCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGcg                                                                                                                                                >  8:34178/1‑149 (MQ=255)     gATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGcgtc                                                                                                                                              <  8:198622/147‑1 (MQ=255)     gATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGcgtc                                                                                                                                              <  4:110812/147‑1 (MQ=255)         aCGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTg                                                                                                                                        >  2:273102/1‑149 (MQ=255)         aCGTCGAACAGCTGGCACAGGGCCTCGTCCNTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTg                                                                                                                                        >  1:32068/1‑149 (MQ=255)            tCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTgg                                                                                                                                       >  4:232575/1‑147 (MQ=255)            tCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTgg                                                                                                                                       <  3:232575/147‑1 (MQ=255)              gAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTcgc                                                                                                                                   <  7:43224/149‑1 (MQ=255)               aaCAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTcgcg                                                                                                                                  >  6:101829/1‑149 (MQ=255)                 cAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCgg                                                                                                                                 >  5:326236/1‑148 (MQ=255)                         acaGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGc                                                                                                                                          >  5:300439/1‑131 (MQ=255)                         acaGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGc                                                                                                                                          <  6:300439/131‑1 (MQ=255)                         acaGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTgg                                                                                                                        <  4:16573/149‑1 (MQ=255)                          caGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGc                                                                                                                       <  6:120060/149‑1 (MQ=255)                                   gTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCggtg                                                                                                               <  6:326236/148‑1 (MQ=255)                                     ccTTGTCGCTGATCAGCTCGAAAGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGgtggtg                                                                                                            >  3:317105/1‑149 (MQ=255)                                         gTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGc                                                                                                        >  3:49330/1‑149 (MQ=255)                                               gATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTgggg                                                                                                  >  5:203259/1‑149 (MQ=255)                                                aTCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCTCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTggg                                                                                                   <  7:34178/147‑1 (MQ=255)                                                     cTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGt                                                                                            >  6:338832/1‑149 (MQ=255)                                                        gAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTg                                                                                                     >  4:266994/1‑137 (MQ=255)                                                        gAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTg                                                                                                     <  3:266994/137‑1 (MQ=255)                                                        gAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTc                                                                                           <  6:203259/147‑1 (MQ=255)                                                         aaCGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCtt                                                                                        >  8:123386/1‑149 (MQ=255)                                                          aCGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCTCGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTg                                                                                       <  5:101829/149‑1 (MQ=255)                                                           cGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTgg                                                                                      <  3:245154/149‑1 (MQ=255)                                                            gggAAGCCTTGCTTGGCCTTGAAGGTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTggg                                                                                     <  7:316731/149‑1 (MQ=255)                                                              gAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTgggg                                                                                    >  2:83251/1‑148 (MQ=255)                                                                    ttgcttgGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAg                                                                              >  2:76141/1‑148 (MQ=255)                                                                      gcttgGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTa                                                                            <  1:76141/148‑1 (MQ=255)                                                                       cttgGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTac                                                                           <  1:273102/148‑1 (MQ=255)                                                                           gCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTAcacca                                                                       <  4:49330/148‑1 (MQ=255)                                                                            ccTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTActccac                                                                      >  7:309438/1‑148 (MQ=255)                                                                             cTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTAcaccacca                                                                    >  6:7848/1‑149 (MQ=255)                                                                              ttGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTAcaccaccac                                                                   >  7:75483/1‑149 (MQ=255)                                                                                gAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTAcaccaccac                                                                   <  7:123386/147‑1 (MQ=255)                                                                                gAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACct                                                                 >  5:162520/1‑149 (MQ=255)                                                                                          tGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCtt                                                       <  4:317105/149‑1 (MQ=255)                                                                                           gCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCtt                                                       >  1:91464/1‑148 (MQ=255)                                                                                            cGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGa                                                     <  2:32068/149‑1 (MQ=255)                                                                                            cGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGa                                                     >  2:286333/1‑149 (MQ=255)                                                                                             gACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAg                                                    >  6:192595/1‑149 (MQ=255)                                                                                              aCTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAggcatcaagtcgcacgagaacttcaacgccaagcaaggcttccccttcgagctgatcagcgacaaggacgaggccctgtgccagctgttcgacgtga                                                   <  6:105322‑M2/149‑98 (MQ=255)                                                                                               cTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAggcatcaagtcgcacgagaacttcaaggccaagcaaggcttcccgttcgagctgatcagcgacaaggacgaggccctgtgccagctgttc                                                          >  4:20960‑M2/1‑51 (MQ=255)                                                                                               cTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAggcatcaagtcgcacgagaacttcaaggccaagcaaggcttcccgttcgagctgatcagcgacaaggacgaggccctgtgccagctgttc                                                          <  3:20960‑M2/141‑91 (MQ=255)                                                                                                  gATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGTTCgg                                               >  3:237228/1‑149 (MQ=255)                                                                                                  gATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGTTCgg                                               >  8:243750/1‑149 (MQ=255)                                                                                                   aTGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGTTCg                                                <  7:3887/147‑1 (MQ=255)                                                                                                   aTGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGTTCg                                                >  8:3887/1‑147 (MQ=255)                                                                                                   aTGCCATCACGCGACACACCGAATATCACGGGGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGTTCgg                                               <  7:224034/148‑1 (MQ=255)                                                                                                       cATCACGCGACACACCGAATATCACGGTGTTGGCCGCGT‑GATggcatcaagtcgcacgagaacttcaaggccaagcaaggcttcccgatcgagctcgaggacagcgacaaggacgaggccatgtgccagatgttcgacgtgatcaagct                                         <  1:110809‑M2/149‑108 (MQ=255)                                                                                                       cATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGTTCGGCAAgg                                          <  5:7848/149‑1 (MQ=255)                                                                                                        aTCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCATGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGTTCGGCAAGGc                                         >  7:176967/1‑149 (MQ=255)                                                                                                                   cacCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTcc                                                                                          >  1:128941/1‑89 (MQ=255)                                                                                                                   cacCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTcc                                                                                          <  2:128941/89‑1 (MQ=255)                                                                                                                    acCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCggtg                                                                                                               >  1:256527/1‑67 (MQ=255)                                                                                                                    acCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCggtg                                                                                                               <  2:256527/67‑1 (MQ=255)                                                                                                                    acCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGTTCGGCAAGGCTGACGGTTTGcc                             <  1:286333/149‑1 (MQ=255)                                                                                                                    acCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGTTCGGCAAGGCTGACGGTTTGcc                             <  1:83251/149‑1 (MQ=255)                                                                                                                    acCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGTTCGGCAAGGCTGACGGTTTGcc                             >  5:94207/1‑149 (MQ=255)                                                                                                                       gAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGTTCGGCAAGGCTGACGGTTTGCCCGc                          <  4:237228/149‑1 (MQ=255)                                                                                                                        aaTATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGTTCGGCAAGGCTGACGGTTTGCCCGCt                         <  6:94207/149‑1 (MQ=255)                                                                                                                          tatCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTCGCCCTCGGTGGTGCAGCCTGGGGTGCTGTACTTGGGGTAGAAGTACACCACCACCAGCTGGCCCTTGAGTTCGGCAAGGCTGACGGTTTGCCCGCtgg                       >  5:206779/1‑149 (MQ=255)                                                                                                                             cACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGTTCGGCAAGGCTGACGGTTTGCCCGCtggtgg                    >  4:196019/1‑149 (MQ=255)                                                                                                                                       gCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGt                                                   >  5:162238/1‑108 (MQ=255)                                                                                                                                       gCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGt                                                   <  6:162238/108‑1 (MQ=255)                                                                                                                                        ccGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGTTCGGCAAGGCTGACGGTTTGCCCGCTGGTGgcctgggcctgg         <  6:162520/149‑1 (MQ=255)                                                                                                                                            ggcgAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGTTCGGCAAGGCTGACGGTTTGCCCGCTGGTGGCCTGGGCCTGGAAGt     <  2:91464/149‑1 (MQ=255)                                                                                                                                             gcgAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGTTCGGCAAGGCTGACGGTTTGCCCGCTGGTGGCCTGGGCCTGGAAGTc    <  5:192595/149‑1 (MQ=255)                                                                                                                                               gAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCtt                                                       >  3:309982/1‑96 (MQ=255)                                                                                                                                               gAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCtt                                                       <  4:309982/96‑1 (MQ=255)                                                                                                                                               gAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGTTCGGCAAGGCTGACGGTTTGCCCGCTGGTGGCCTGGGCCTGGAAGTCgg  >  1:297675/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                                   GCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGATGCCATCACGCGACACACCGAATATCACGGTGTTGGCCGCGGCGAAGGCGTCGTGCTGGTCGCGGAAGCCCTGGCCCTCGGTGGTGCAGCCTGGGGTGCTGTCCTTGGGGTAGAAGTACACCACCACCTGCTGGCCCTTGAGTTCGGCAAGGCTGACGGTTTGCCCGCTGGTGGCCTGGGCCTGGAAGTCGG  >  NC_002947/1413578‑1413868

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.