New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3059850 =	45 (0.840)	6 (0.120)	6/248	NT	12.7%	coding (1129/1275 nt)	PP_2671	sensor histidine kinase
	?	NC_002947	3059920 =	40 (0.790)					coding (1199/1275 nt)	PP_2671	sensor histidine kinase

GCATGCCGGTGCCAGCCAGGTGCGGGTGCGCCTGCAGCGCAGTCCCAAGGGCTTGCGCCTGTTCATTCGCGACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGGTCGATGACCACGCCGTGGTCCGCCAGGGCTACGCCAGCTTGCTGCGGGCGGTGCTG  >  NC_002947/3059774‑3060067                                                                                                                                                   |                                                                                                                                                     gCATGCCGGTGCCAGCCAGGTGCGGGTGCGCCTGCAGCGCAGTCCCAAGGGCTTGCGCCTGTTCATTCGCGACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTg                                                                                                                                                    <  2:273669/149‑1 (MQ=255)  cATGCCGGTGCCAGCCAGGTGCGGGTGCGCCTGCAGCGCAGTCCCAAGGGCTTGCGCCTGTTCATTCGCGACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTgg                                                                                                                                                   <  5:108526/149‑1 (MQ=255)     gCCGGTGCCAGCCAGGTGCGGGTGCGCCTGCAGCGCAGTCCTAAGGGCTTGCGCCTGTTCATTCGCGACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTggggg                                                                                                                                                >  6:270918/1‑149 (MQ=255)      ctcctgtggaatgttaagggccagcgcccagcctcctccaggtcggctgaaaattcgtaactcccccccaaGGCTGCGGCGACCACCAGCCCCAGCGCCCAGTGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTgggggg                                                                                                                                               >  6:132601‑M1/72‑149 (MQ=255)             cagccagGTGCGGGTGCGCCTGCAGCGCAGTCCCAAGGGCTTGCGCCTGTTCATTCGCGACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTAc                                                                                                                                        >  2:316298/1‑149 (MQ=255)                ccagGTGCGGGTGCGCCTGCAGCGCAGTCCCAAGGGCTTGCGCCTGTTCATTCGCGACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGAAGTTACGCa                                                                                                                                     <  3:60435/149‑1 (MQ=255)                                  gCAGCGCAGTCCCAAGGGCTTGCGCCTGTTCATTCGCGACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAg‑c                                                                                                                            <  5:8717/139‑1 (MQ=255)                                  gCAGCGCAGTCCCAAGGGCTTGCGCCTGTTCATTCGCGACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAg‑c                                                                                                                            >  6:8717/1‑139 (MQ=255)                                    aGCGCAGTCCCAAGGGCTTGCGCCTGTTCATTCGCGACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAggc                                                                                                                >  3:200098/1‑149 (MQ=255)                                     gcgcAGTCCCAAGGGCTTGCGCCTGTTCATTCGCGACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGAATTTTCAG‑CCGCCCTGGAggcg                                                                                                               >  7:212842/1‑149 (MQ=255)                                      cgcAGTCCCAAGGGCTTGCGCCTGTTCATTCGCGACAATGGCTGCGGCGCCCACCAGCCCGAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCATCCTTGGGGGGGTGTTACGCATTTTCAG‑CCGCCCTGGAggcgg                                                                                                              <  1:203529/149‑1 (MQ=255)                                       gcAGTCCCAAGGGCTTGCGCCTGTTCATTCGCGACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAggcggc                                                                                                             <  4:200098/149‑1 (MQ=255)                                              cAAGGGCTTGCGCCTGTTCATTCGCGACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑ACGCCCTGGAGGCGGCTGGgcgc                                                                                                      >  3:234214/1‑149 (MQ=255)                                               aaGGGCTTGCGCCTGTTCATTCGCGACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCt                                                                                                     >  4:282362/1‑149 (MQ=255)                                                 gggCTTGCGCCTGTTCATTCGCGACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTgg                                                                                                   <  3:282362/149‑1 (MQ=255)                                                    cTTGCGCCTGTTCATTCGCGACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGccc                                                                                                >  7:97250/1‑149 (MQ=255)                                                        cgcCTGTTCATTCGCGACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTaa                                                                                            <  5:270918/149‑1 (MQ=255)                                                             gTTCATTCGCGACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTc                                                                                       <  7:162352/149‑1 (MQ=255)                                                                 aTTCGCGACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTccc                                                                                     >  3:117967/1‑147 (MQ=255)                                                                 aTTCGCGACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTccc                                                                                     >  3:122763/1‑147 (MQ=255)                                                                     gcgACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCaggag                                                                               >  2:192626/1‑149 (MQ=255)                                                                     gcgACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCaggag                                                                               >  8:96497/1‑149 (MQ=255)                                                                     gcgACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGAGCTGGCCCGTAACGTTCCCCaggag                                                                               >  1:209992/1‑149 (MQ=255)                                                                     ccccccaaggctgcgggcgcgctcggccatcgagtgcaggcctaccactgggcgctggggctggtggtcgccgcagccTTGGGGGGGAGTTACGAATTTTCAG‑CCGACCTGGAGGAGGCTGGGCGCTGGCCCTTAACATTCCACaggag                                                                               >  6:132601‑M2/79‑149 (MQ=255)                                                                             GGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGACTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGtgat                                                                        <  1:9442‑M1/148‑1 (MQ=255)                                                                              gctgcgggcgcgctcggccatcgagtgcaggcctacccctgggcgctggggctggtgggcgccgcagccTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGtgatg                                                                       >  5:222958‑M2/70‑148 (MQ=255)                                                                              gcggcgggcgcgctcggccatcgagtgcaggcctacccctgggcgctggggctggttggcgccgcagccTTGGGGGTGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGATGTGtgatga                                                                      <  5:132601‑M2/80‑1 (MQ=255)                                                                               ctgcgggcgcgctcggccatcgagtgcaggcctacccctgggcgctggggctggtgggcgccgcagccTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGaa                                                                     >  6:79086‑M2/69‑149 (MQ=255)                                                                               CTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGaa                                                                     <  5:262591‑M1/149‑1 (MQ=255)                                                                                  CGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAatat                                                                  <  5:91795‑M1/149‑1 (MQ=255)                                                                                  CGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAata                                                                   >  1:316298‑M1/1‑148 (MQ=255)                                                                                   GGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATc                                                                 >  4:117967‑M1/1‑149 (MQ=255)                                                                                   GGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATc                                                                 >  4:122763‑M1/1‑149 (MQ=255)                                                                                    GCGCCCTCCTGCCGCAGCGGCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CGGCGCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCg                                                                >  2:209992‑M1/1‑149 (MQ=255)                                                                                        cgctcggccatcgagtgcaggcctacccctgggcgctggggctggtgggcgccgcagccTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGtt                                                            <  5:79086‑M2/90‑1 (MQ=255)                                                                                        ccaccaGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGtt                                                            <  5:277242/149‑1 (MQ=255)                                                                                         caccaGCCCCAGCACCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAGCCCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGtt                                                            <  1:102354/149‑1 (MQ=255)                                                                                          accaGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCgtgt                                                             >  5:175352/1‑146 (MQ=255)                                                                                          accaGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCgtgt                                                             <  6:175352/146‑1 (MQ=255)                                                                                          accaGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTgg                                                          >  7:24878/1‑149 (MQ=255)                                                                                             aGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGGTc                                                        >  6:273723/1‑148 (MQ=255)                                                                                                cccAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCCGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGGGGTGTGATGAATATCGTGTTGGTCGAt                                                     >  6:278075/1‑148 (MQ=255)                                                                                                cccAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGGTCGAt                                                     >  7:21552/1‑148 (MQ=255)                                                                                                   aGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGGTCGATGAc                                                  >  7:115474/1‑148 (MQ=255)                                                                                                         caggcctacccctgggcgctggggctggtgggcgccgcagccTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGGTCGATGACCACGCCg                                           <  6:222958‑M2/107‑1 (MQ=255)                                                                                                              gTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGACTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGGTCGATGACCACGCCGTGGTc                                      <  2:9442/149‑1 (MQ=255)                                                                                                               tAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGGTCGATGACCACGCCGTGGTcc                                     <  8:24878/149‑1 (MQ=255)                                                                                                                  gCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGGTCGATGACCACGCCGTGGTCCGc                                   >  1:234841/1‑148 (MQ=255)                                                                                                                   ccTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGGTCGATGACCACGGCGTGGTcatcga                                 <  7:96497/149‑6 (MQ=255)                                                                                                                     tGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGGTCGATGACCACGCCGTGGTCCGCCAgg                               >  3:306357/1‑149 (MQ=255)                                                                                                                       cACTCGATGGCCGAGCGCGCCCGCAGCCTTTGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTATCATTCCGCAGGAGGTGTGATGAATTTCGTGTTGGTCGATGACCACGCCGTGGTCCGACAGGGc                             <  4:234214/149‑1 (MQ=255)                                                                                                                       cACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGGTCGATGACCACGCCGTGGTCCGCCAggg                              <  6:91795/148‑1 (MQ=255)                                                                                                                          tCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGGTCGATGACCACGCCGTGGTCCGCCAGGGCTAc                          >  1:227204/1‑149 (MQ=255)                                                                                                                            gATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGGTCGATGACCACGCCGTGGTCCGCCAGGGCTACGc                        >  1:115100/1‑149 (MQ=255)                                                                                                                            gATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGACCTGGAGGCGGCTGGGATCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGTTCGATGACCACGCCGTGGTCCGCCAGGCCTACGc                        >  2:213219/1‑149 (MQ=255)                                                                                                                                     gcgcgcCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGGTCGATGACCACGCCGTGGTCCGCCAGGGCTACGCCAGCTtgct               <  8:21552/149‑1 (MQ=255)                                                                                                                                           ccgcagccTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGGTCGATGACCACGCCGTGGTCCGCCAGGGCTACGCCAGCTTGCTgcgggc         >  4:47168‑M2/9‑149 (MQ=255)                                                                                                                                            cgcagccTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGGTCGATGACCACGCCGTGGTCCGCCAGGGCTACGCCAGCTTGCTgcgggcg        <  8:97250‑M2/142‑1 (MQ=255)                                                                                                                                              cagccTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGGTCGATGACCACGCCGTGGTCCGCCAGGGCTACGCCAGCTTGCTGCGGGCGGt      <  2:234841‑M2/144‑1 (MQ=255)                                                                                                                                              cagccTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGGTCGATGACCACGCCGTGGTCCGCCAGGGCTACGCCAGCTTGCTGCGGGCGGt      <  2:227204‑M2/144‑1 (MQ=255)                                                                                                                                                  cTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGGTCGATGACCACGCCGTGGTCCGCCAGGGCTACGCCAGCTTGCTGCGGGCGGtgctg  <  6:262591‑M2/148‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                     GCATGCCGGTGCCAGCCAGGTGCGGGTGCGCCTGCAGCGCAGTCCCAAGGGCTTGCGCCTGTTCATTCGCGACAATGGCTGCGGCGCCCACCAGCCCCAGCGCCCAGGGGTAGGCCTGCACTCGATGGCCGAGCGCGCCCGCAGCCTTGGGGGGGAGTTACGCATTTTCAG‑CCGCCCTGGAGGCGGCTGGGCGCTGGCCCTTAACATTCCCCAGGAGGTGTGATGAATATCGTGTTGGTCGATGACCACGCCGTGGTCCGCCAGGGCTACGCCAGCTTGCTGCGGGCGGTGCTG  >  NC_002947/3059774‑3060067

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.