| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 850,092 | Δ2,855 bp | [rhtA]–[mntS] | [rhtA], ompX, opgE, [mntS] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 850092 | 852946 | 2855 | 102 [0] | [0] 102 | [rhtA]–[mntS] | [rhtA], ompX, opgE, [mntS] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 850091 | 0 (0.000) | 102 (1.120) | 83/296 | 0.1 | 100% | coding (7/888 nt) | rhtA | threonine and homoserine efflux system |
| ? | NC_000913 | 852947 = | 0 (0.000) | coding (51/129 nt) | mntS | Mn(2)‑response protein, MntR‑repressed | |||||
Only 100 of 102 total aligned reads displayed.
TCCTAATGCCAGACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCAGGCATCCTTTCTCCCACAAATATCTAGACTTAAGTAAAGCGTGGAGTGTACTGGATATACCCAATGCTGGTTGAGCATTTGTTGAAAAAATTTTCCCCCGTTTTGACTAAAATGCGCCAGGATTGATGGAATCATTAGTCTGGTG > NC_000913/849945‑850237 | tCCTAATGCCAGACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCttt < 2:260741‑M1/150‑4 (MQ=255)tCCTAATGCCAGACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCttt < 1:1299220‑M1/150‑4 (MQ=255) ccTAATGCCAGACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaa < 2:912042‑M1/151‑6 (MQ=255) ccNNNNNNNNNNNNNNGCGCNGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTNCNCCCTGAATAGACGCCATGGCAACGNGCAATATGANNATTGGTAACCAGACCGGNATTTTACGTAATGAACCttta > 1:49217‑M1/1‑146 (MQ=255) aaTGCCAGACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagg > 2:510558‑M1/1‑143 (MQ=255) aaTGCCAGACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaa < 1:1342330‑M1/149‑7 (MQ=255) aTGCCAGACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaaggg < 2:718473‑M1/151‑10 (MQ=255) gACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatg < 2:63008‑M1/151‑16 (MQ=255) gACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatg > 1:95985‑M1/1‑136 (MQ=255) gACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatg > 1:1394074‑M1/1‑136 (MQ=255) aCGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatg > 1:523363‑M1/1‑135 (MQ=255) gcagcgcagTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgact > 2:149335‑M1/1‑133 (MQ=255) gcgcagTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaa > 1:914976‑M1/1‑130 (MQ=255) agTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacg > 1:1312746‑M1/1‑126 (MQ=255) agTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacg > 1:439767‑M1/1‑126 (MQ=255) gTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgc > 2:224419‑M1/1‑125 (MQ=255) cccGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatac < 2:507330‑M1/151‑33 (MQ=255) ccGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTTACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatac > 1:1187451‑M1/1‑118 (MQ=255) gTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacct > 1:465934‑M1/1‑115 (MQ=255) gcgcCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctct < 1:868952‑M1/151‑39 (MQ=255) gcCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttg < 2:251895‑M1/151‑41 (MQ=255) cccACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttg > 2:1025792‑M1/1‑110 (MQ=255) caccaGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaac > 2:454317‑M1/1‑108 (MQ=255) accaGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaact > 2:658177‑M1/1‑107 (MQ=255) accaGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaact < 1:777102‑M1/151‑45 (MQ=255) caGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactca < 1:284257‑M1/151‑47 (MQ=255) gagGAAAAAGAGACTTAGCTAACGAGGCTCAACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGGCCGGCATTTTACGTAATGAGCCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcatt > 1:817376‑M1/1‑103 (MQ=255) gACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctc > 1:900275‑M1/1‑92 (MQ=255) gACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctc < 2:1294138‑M1/151‑60 (MQ=255) gACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctc > 2:1337770‑M1/1‑92 (MQ=255) gACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctc > 2:540881‑M1/1‑92 (MQ=255) aGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgac > 1:1051344‑M1/1‑87 (MQ=255) aGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgac > 2:326129‑M1/1‑87 (MQ=255) aGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgac < 2:59559‑M1/151‑65 (MQ=255) tAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttg > 2:565461‑M1/1‑84 (MQ=255) aaCGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgc > 2:691026‑M1/1‑83 (MQ=255) aaCGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgc > 2:653848‑M1/1‑83 (MQ=255) aGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaat < 1:988935‑M1/151‑73 (MQ=255) ggCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatc < 1:222635‑M1/151‑74 (MQ=255) cTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatccc > 1:374950‑M1/1‑76 (MQ=255) ccACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgt < 2:570905‑M1/151‑78 (MQ=255) ccACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgt > 2:69720‑M1/1‑74 (MQ=255) cACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtc > 2:475868‑M1/1‑73 (MQ=255) aCCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcg < 2:17003‑M1/151‑80 (MQ=255) aCCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcg > 2:428747‑M1/1‑72 (MQ=255) tGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatcc > 1:1416256‑M1/1‑68 (MQ=255) gAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatc < 2:319879‑M1/149‑83 (MQ=255) gAATAGACGACGTGGAAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTTCGTAATGAACCtttaaagggagaatgactaaccatgcgtatacgcctcttgatgtcactcataaggcctcctgacttgctaatcccgttgataat < 1:6979‑M1/151‑85 (MQ=255) aTAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttg < 1:168729‑M1/151‑87 (MQ=255) aTAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttg < 2:780919‑M1/151‑87 (MQ=255) aTAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttg < 1:1338094‑M1/151‑87 (MQ=255) aGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttg > 1:962976‑M1/1‑63 (MQ=255) gACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagg < 1:550055‑M1/151‑90 (MQ=255) aCGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgaggg < 1:716958‑M1/151‑91 (MQ=255) ccATGGCAACGCGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatg > 1:1032058‑M1/1‑58 (MQ=255) ccATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatg < 2:708887‑M1/151‑94 (MQ=255) ccATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatg > 1:721812‑M1/1‑58 (MQ=255) ccATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatg < 2:10927‑M1/151‑94 (MQ=255) aTGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacccgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgat < 1:227611‑M1/151‑96 (MQ=255) aTGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgat > 2:794788‑M1/1‑56 (MQ=255) ggCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattg > 2:877094‑M1/1‑54 (MQ=255) cAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgc > 1:115215‑M1/1‑52 (MQ=255) aaCGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcat < 2:751649‑M1/151‑101 (MQ=255) gAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattac < 2:1150039‑M1/151‑104 (MQ=255) aGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattaca < 2:465925‑M1/151‑105 (MQ=255) aaTATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatac > 1:5709‑M1/1‑44 (MQ=255) atatGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatac > 2:574791‑M1/1‑43 (MQ=255) atGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatac > 1:1193013‑M1/1‑41 (MQ=255) cTATTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatat > 2:224701‑M1/1‑37 (MQ=255) aTTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagc < 2:570235‑M1/151‑117 (MQ=255) aTTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagc > 2:1021281‑M1/1‑35 (MQ=255) aTTGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatata < 1:1200724‑M1/149‑115 (MQ=255) ttGGTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagc > 2:190141‑M1/1‑34 (MQ=255) ggTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcaca < 2:399860‑M1/151‑120 (MQ=255) ggTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcac < 2:1168169‑M1/150‑119 (MQ=255) ggTAACCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcac < 2:1440556‑M1/150‑119 (MQ=255) aCCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggct > 1:746012‑M1/1‑28 (MQ=255) aCCAGACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggct < 1:1291679‑M1/151‑124 (MQ=255) gACCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatat < 2:1054022‑M1/151‑128 (MQ=255) aCCGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatatt < 2:1312749‑M1/151‑129 (MQ=255) ccGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatatta < 2:914980‑M1/151‑130 (MQ=255) ccGGCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatatta < 2:1266910‑M1/151‑130 (MQ=255) ggCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattata < 1:1205292‑M1/151‑132 (MQ=255) ggCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattat > 2:186034‑M1/1‑20 (MQ=255) gCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatat < 2:924023‑M1/151‑133 (MQ=255) gCATTTTACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatat > 1:493190‑M1/1‑19 (MQ=255) ttttACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagc > 1:450781‑M1/1‑16 (MQ=255) tttACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagc < 1:224426‑M1/150‑136 (MQ=255) tttACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagc < 1:569131‑M1/150‑136 (MQ=255) tACGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagctat > 1:988687‑M1/1‑13 (MQ=255) aCGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagctat < 2:163697‑M1/150‑139 (MQ=255) cGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagctattg > 1:1058103‑M1/1‑11 (MQ=255) cGTAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagctattg > 2:1417888‑M1/1‑11 (MQ=255) tAATGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagctattgct > 2:23866‑M1/1‑9 (MQ=255) aaTGAACCtttaaagggagaatgcctaaacccgcgcatacacctcttgaactaattcaaaagacctcctgacttgcaaatcccgtcaatccttgagggaggattgcattacatacagatatagcacaggctatattataaagcttttgct < 1:232930‑M1/150‑143 (MQ=255) aTGAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagctattgctaa < 1:565466‑M1/151‑145 (MQ=255) gAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagctattgctaaaa < 1:441739‑M1/151‑147 (MQ=255) gAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagctattgctaaaa < 2:1026132‑M1/151‑147 (MQ=255) gAACCtttaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagctattgctaaa < 2:900278‑M1/150‑146 (MQ=255) gAACCttcaaagggagaatgactaaacacgcgcatacacctcttgaactcattcataagacctcctgacttgctaatcccgtcgatccttgagggatgattgcattacatacagatatagcacaggctatattatatagctattgctaaa < 2:677162‑M1/150‑146 (MQ=255) | TCCTAATGCCAGACGCAGCGCAGTGACACCCGGTGCGCCCACCAGAGGAAAAAGTGACTTAGCTAACGAGGCTCCACCCTGAATAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCAGGCATCCTTTCTCCCACAAATATCTAGACTTAAGTAAAGCGTGGAGTGTACTGGATATACCCAATGCTGGTTGAGCATTTGTTGAAAAAATTTTCCCCCGTTTTGACTAAAATGCGCCAGGATTGATGGAATCATTAGTCTGGTG > NC_000913/849945‑850237 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |