| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 850,092 | Δ2,855 bp | [rhtA]–[mntS] | [rhtA], ompX, opgE, [mntS] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 850092 | 852946 | 2855 | 102 [0] | [0] 102 | [rhtA]–[mntS] | [rhtA], ompX, opgE, [mntS] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 850091 | 0 (0.000) | 102 (1.120) | 83/296 | 0.1 | 100% | coding (7/888 nt) | rhtA | threonine and homoserine efflux system |
| ? | NC_000913 | 852947 = | 0 (0.000) | coding (51/129 nt) | mntS | Mn(2)‑response protein, MntR‑repressed | |||||
Only 100 of 102 total aligned reads displayed.
GGGGTTTTTCAGACCAAAACGCGTTATGCCTGCATGAAAGCAGGAGTGAAGCGGCGTACCGCGACGCCGCTATTTATCGGAAGGTTTATCTTGCTGCGGTTTGTTGTTGACCATATCGCACAACATAGAGAGCAGCATTAACCGTACTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTATTGCTAAAA > NC_000913/852800‑853092 | tcctaatgccagacgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccttt < 2:260741‑M2/3‑1 (MQ=255)tcctaatgccagacgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccttt < 1:1299220‑M2/3‑1 (MQ=255) cctaatgccagacgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTaa < 2:912042‑M2/5‑1 (MQ=255) ccnnnnnnnnnnnnnngcgcngtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctncnccctgaatagacgccatggcaacgngcaatatgannattggtaaccagaccggnattttacgtaatgaaccTTTa > 1:49217‑M2/147‑150 (MQ=255) aatgccagacgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTaaa < 1:1342330‑M2/6‑1 (MQ=255) aatgccagacgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAgg > 2:510558‑M2/144‑151 (MQ=255) atgccagacgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAggg < 2:718473‑M2/9‑1 (MQ=255) gacgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATg < 2:63008‑M2/15‑1 (MQ=255) gacgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATg > 1:95985‑M2/137‑151 (MQ=255) gacgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATg > 1:1394074‑M2/137‑151 (MQ=255) acgcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATg > 1:523363‑M2/136‑150 (MQ=255) gcagcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACt > 2:149335‑M2/134‑151 (MQ=255) gcgcagtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTaa > 1:914976‑M2/131‑150 (MQ=255) agtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACAcg > 1:1312746‑M2/127‑151 (MQ=255) agtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACAcg > 1:439767‑M2/127‑151 (MQ=255) gtgacacccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACAcgc > 2:224419‑M2/126‑151 (MQ=255) cccggtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATac < 2:507330‑M2/32‑1 (MQ=255) ccggtgcgcccaccagaggaaaaagtgacttagcttacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATac > 1:1187451‑M2/119‑150 (MQ=255) gtgcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACct > 1:465934‑M2/116‑151 (MQ=255) gcgcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACctct < 1:868952‑M2/38‑1 (MQ=255) gcccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTg < 2:251895‑M2/40‑1 (MQ=255) cccaccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTg > 2:1025792‑M2/111‑150 (MQ=255) caccagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAAc > 2:454317‑M2/109‑151 (MQ=255) accagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACt > 2:658177‑M2/108‑151 (MQ=255) accagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACt < 1:777102‑M2/44‑1 (MQ=255) cagaggaaaaagtgacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACtca < 1:284257‑M2/46‑1 (MQ=255) gaggaaaaagagacttagctaacgaggctcaaccctgaatagacgccatggcaacgagcaatatgactattggtaaccaggccggcattttacgtaatgagccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACtcatt > 1:817376‑M2/104‑151 (MQ=255) gacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGAcctc > 1:900275‑M2/93‑151 (MQ=255) gacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGAcctc < 2:1294138‑M2/59‑1 (MQ=255) gacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGAcctc > 2:1337770‑M2/93‑151 (MQ=255) gacttagctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGAcctc > 2:540881‑M2/93‑151 (MQ=255) agctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGAc > 1:1051344‑M2/88‑151 (MQ=255) agctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGAc > 2:326129‑M2/88‑151 (MQ=255) agctaacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGAc < 2:59559‑M2/64‑1 (MQ=255) taacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTg > 2:565461‑M2/85‑151 (MQ=255) aacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGc > 2:691026‑M2/84‑151 (MQ=255) aacgaggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGc > 2:653848‑M2/84‑151 (MQ=255) aggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAAt < 1:988935‑M2/72‑1 (MQ=255) ggctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATc < 1:222635‑M2/73‑1 (MQ=255) ctccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATccc > 1:374950‑M2/77‑151 (MQ=255) ccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGt < 2:570905‑M2/77‑1 (MQ=255) ccaccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGt > 2:69720‑M2/75‑151 (MQ=255) caccctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTc > 2:475868‑M2/74‑151 (MQ=255) accctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCg < 2:17003‑M2/79‑1 (MQ=255) accctgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCg > 2:428747‑M2/73‑151 (MQ=255) tgaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATcc > 1:1416256‑M2/69‑151 (MQ=255) gaatagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATc < 2:319879‑M2/82‑1 (MQ=255) gaatagacgacgtggaaacgagcaatatgactattggtaaccagaccggcatttttcgtaatgaaccTTTAAAGGGAGAATGACTAACCATGCGTATACGCCTCTTGATGTCACTCATAAGGCCTCCTGACTTGCTAATCCCGTtgataat < 1:6979‑M2/84‑4 (MQ=255) atagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTg < 1:168729‑M2/86‑1 (MQ=255) atagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTg < 2:780919‑M2/86‑1 (MQ=255) atagacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTg < 1:1338094‑M2/86‑1 (MQ=255) agacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTg > 1:962976‑M2/64‑149 (MQ=255) gacgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAgg < 1:550055‑M2/89‑1 (MQ=255) acgccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAggg < 1:716958‑M2/90‑1 (MQ=255) ccatggcaacgcgcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGgatg > 1:1032058‑M2/59‑151 (MQ=255) ccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGgatg < 2:708887‑M2/93‑1 (MQ=255) ccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGgatg > 1:721812‑M2/59‑151 (MQ=255) ccatggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGgatg < 2:10927‑M2/93‑1 (MQ=255) atggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACCCGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGgatgat < 1:227611‑M2/95‑1 (MQ=255) atggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGgatgat > 2:794788‑M2/57‑151 (MQ=255) ggcaacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTg > 2:877094‑M2/55‑151 (MQ=255) caacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGc > 1:115215‑M2/53‑150 (MQ=255) aacgagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCAt < 2:751649‑M2/100‑1 (MQ=255) gagcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATtac < 2:1150039‑M2/103‑1 (MQ=255) agcaatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATtaca < 2:465925‑M2/104‑1 (MQ=255) aatatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATtacatac > 1:5709‑M2/45‑151 (MQ=255) atatgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATtacatac > 2:574791‑M2/44‑150 (MQ=255) atgactattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATtacatac > 1:1193013‑M2/42‑148 (MQ=255) ctattggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGatat > 2:224701‑M2/38‑150 (MQ=255) attggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGAtata < 1:1200724‑M2/114‑1 (MQ=255) attggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGc < 2:570235‑M2/116‑1 (MQ=255) attggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGc > 2:1021281‑M2/36‑151 (MQ=255) ttggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGc > 2:190141‑M2/35‑150 (MQ=255) ggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGcaca < 2:399860‑M2/119‑1 (MQ=255) ggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGcac < 2:1168169‑M2/118‑1 (MQ=255) ggtaaccagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGcac < 2:1440556‑M2/118‑1 (MQ=255) accagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCt > 1:746012‑M2/29‑151 (MQ=255) accagaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCt < 1:1291679‑M2/123‑1 (MQ=255) gaccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCtatat < 2:1054022‑M2/127‑1 (MQ=255) accggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCtatatt < 2:1312749‑M2/128‑1 (MQ=255) ccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCtatatta < 2:914980‑M2/129‑1 (MQ=255) ccggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCtatatta < 2:1266910‑M2/129‑1 (MQ=255) ggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCtatattata < 1:1205292‑M2/131‑1 (MQ=255) ggcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCtatattat > 2:186034‑M2/21‑150 (MQ=255) gcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCtatattatat < 2:924023‑M2/132‑1 (MQ=255) gcattttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCtatattatat > 1:493190‑M2/20‑151 (MQ=255) ttttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGc > 1:450781‑M2/17‑151 (MQ=255) tttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGc < 1:224426‑M2/135‑1 (MQ=255) tttacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGc < 1:569131‑M2/135‑1 (MQ=255) tacgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTAt > 1:988687‑M2/14‑151 (MQ=255) acgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTAt < 2:163697‑M2/138‑1 (MQ=255) cgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTATTg > 1:1058103‑M2/12‑151 (MQ=255) cgtaatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTATTg > 2:1417888‑M2/12‑151 (MQ=255) taatgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTATTGCt > 2:23866‑M2/10‑151 (MQ=255) aatgaaccTTTAAAGGGAGAATGCCTAAACCCGCGCATACACCTCTTGAACTAATTCAAAAGACCTCCTGACTTGCAAATCCCGTCAATCCTTGAGGGAGGATTGCATTACATACAGATATAGCACAGGCTATATTATAAAGCTTTTGCt < 1:232930‑M2/142‑1 (MQ=255) atgaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTATTGCTaa < 1:565466‑M2/144‑1 (MQ=255) gaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTATTGCTaaaa < 1:441739‑M2/146‑1 (MQ=255) gaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTATTGCTaaaa < 2:1026132‑M2/146‑1 (MQ=255) gaaccTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTATTGCTaaa < 2:900278‑M2/145‑1 (MQ=255) gaaccTTCAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTATTGCTaaa < 2:677162‑M2/145‑1 (MQ=255) | GGGGTTTTTCAGACCAAAACGCGTTATGCCTGCATGAAAGCAGGAGTGAAGCGGCGTACCGCGACGCCGCTATTTATCGGAAGGTTTATCTTGCTGCGGTTTGTTGTTGACCATATCGCACAACATAGAGAGCAGCATTAACCGTACTTTAAAGGGAGAATGACTAAACACGCGCATACACCTCTTGAACTCATTCATAAGACCTCCTGACTTGCTAATCCCGTCGATCCTTGAGGGATGATTGCATTACATACAGATATAGCACAGGCTATATTATATAGCTATTGCTAAAA > NC_000913/852800‑853092 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |