| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 65380 | 264 (0.880) | 20 (0.080) | 13/134 | NT | 8.0% | intergenic (+212/+43) | adhD/USA300HOU_RS00280 | Putative alcohol dehydrogenase D/hypothetical protein |
| ? | USA300TCH1516_ALE | = 65387 | 242 (0.970) | intergenic (+219/+36) | adhD/USA300HOU_RS00280 | Putative alcohol dehydrogenase D/hypothetical protein | |||||
Only 100 of 125 total aligned reads displayed.
ATTGTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/65278‑65380‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcatccttcacTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAATATATAGAT < USA300TCH1516_ALE/65387‑65298 ATTGTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGG < 1:5561192/91‑1ATTGTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGG > 1:3979791/1‑91ATTGTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGG < 1:3275719/91‑1ATTGTACTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAGAGATATAGG < 2:5369322/91‑1 TTGTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGA < 1:4753413/91‑1 TTGTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGA < 2:3897627/91‑1 TTGTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGA > 1:4292724/1‑91 TTGTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGA > 1:3806246/1‑91 TTGTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGA > 1:3806215/1‑91 TTGTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGA > 1:2283879/1‑91 TTGTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTATAAAAAAAAAAAAAAAGATATAGGA < 2:5261131/91‑1 TGTATTTTTTCTTTTTTTTTCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAACAAAGATATAGGAG > 2:2130184/1‑91 TGTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAG < 2:758160/91‑1 TGTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAG < 1:790317/91‑1 GTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGTAGC > 2:5018279/1‑91 GTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGC < 1:3090224/91‑1 GTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGC > 1:4023884/1‑91 TATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTTGTTATTAAAAGATATAGGAGCA > 2:5332889/1‑91 TATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTATTTATATAAAGATATAGGAGCA > 2:5333204/1‑91 TATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTATATAAAAAAAGATATAGGAGCA > 2:1848660/1‑91 TATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCA < 2:5002599/91‑1 TATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCA > 2:5333319/1‑91 TATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCA < 1:3257660/91‑1 TATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCA < 1:3095004/91‑1 TATTTCTACATTACATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTATATAAATAAAGATATAGTAGCA > 2:5617378/1‑91 ATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCAT > 1:2213515/1‑91 ATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCAT > 1:5734088/1‑91 TTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATC > 2:733089/1‑91 TTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCT > 2:387686/1‑91 TACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTC < 2:4012989/91‑1 TACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTC < 1:5244810/91‑1 TACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTC > 1:5029570/1‑91 TACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTC < 2:722879/91‑1 TACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTC > 2:2179155/1‑91 TACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTC < 1:1957742/91‑1 TACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATACGAGCATCCTTC > 2:5854409/1‑91 TACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAAGAGCATCCTTC > 2:3736794/1‑91 ACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCA > 1:605335/1‑91 ACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCA > 2:5684988/1‑91 ACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCA > 2:5046106/1‑91 ACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCA < 1:1111170/91‑1 ACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCA < 1:1110357/91‑1 ACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCA > 1:5612809/1‑91 CATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCAC > 1:3260015/1‑91 CATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCAC > 1:3281181/1‑91 CATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCAC > 1:4367859/1‑91 CATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCAC < 2:2413737/91‑1 TTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCACTgc > 2:4637638/1‑89 TATCTATGTATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCACTTTTGCG < 1:4665846/91‑1 TATCTATATATTCGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTCTTAGATAAAAAAAGATATAGGAGCATCCTTCACTTTTGCG < 2:3750508/91‑1 TATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCACTTTTGCG < 1:4540297/91‑1 TATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCACTTTTGCG < 1:4624114/91‑1 TATCTATATATTAAAGGATAAATGTTTTAAAACTAATTACGAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCACTTTTGCG < 2:5756450/91‑1 ATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCACTTTTGCGG < 2:2294638/91‑1 ATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAAGAGCATCCTTCACTTTTGCGG < 1:4736535/91‑1 ATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCACTTTTGCGGTGAA < 2:3242156/91‑1 AGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCACTTTTGCGGTGAAGGATGCT < 1:1136825/91‑1 AGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCACTTTTGCGGTGAAGGATGCT > 2:3678333/1‑91 AGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCACTTTTGCGGTGAAGGATGCTCCT < 2:381085/91‑1 aATAAATGTTTTAAAACTAATTACTAATAATTTTTTTAGAGAAAAAAAGATATAAGAGCATCCTTCACTTTTGCGGTGAAGGATGCTCCTA < 1:38120/90‑1 TTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTT < 1:3678333/91‑1 AAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAAGAGCATCCTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTAT < 1:5000561/91‑1 ATAAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTT > 2:3398177/1‑91 AAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACA > 1:3055920/1‑91 GAGCATCCTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTt > 2:1943851/1‑90 GAGCATCCTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTC < 1:2038544/91‑1 GAGCATCCTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTC > 1:1518153/1‑91 GAGCATCCTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTC < 2:2188093/91‑1 GAGCATCCTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTC > 1:1133309/1‑91 gGCATCCTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCT < 2:2343756/90‑1 AGCATCCTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCT < 1:5318380/91‑1 GCATCCTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTA < 1:995563/91‑1 GCATCCTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTA > 2:3082611/1‑91 GCATCCTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTA > 2:287439/1‑91 GCATCCTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTA > 2:2456566/1‑91 GCATCCTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGATTTAAAACATTTATCTTCTA > 2:4764990/1‑91 GCATCCTTCACTTTTGCGGTGAAGGATGCTCCTATATATTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTA < 2:628537/91‑1 CATCCTTCACTTTTGCGGTGAAGTATGCTTCTATATATTTTTATATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAA < 2:4436161/91‑1 CATCCTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAA < 1:1222221/91‑1 CATCCTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAA > 2:3151782/1‑91 CATCCTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAA < 2:573049/91‑1 ATCCTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAAT > 1:4496256/1‑91 TCCTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAATAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAATA > 2:3927253/1‑91 TCCTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAATA < 2:4445181/91‑1 CTTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTAGCTAAAAAAACTATTAGTAATTAGCTTTAAAACATTTATCTTCTAATATA > 2:5429117/1‑91 CTTCACTTTTGCGGTGAAGGATGCTCCTATATATTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAATATA < 2:1085653/91‑1 TTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAATATAT > 1:2584685/1‑91 TTCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAATATAT > 1:1462657/1‑91 TTCACGATTGCGAAGAAGGATGCTCTTATAGCTTTTTTTATCTAAAAAACCTATTAGTAATTAGTTTTAAAACATTTATCTTCTAATATAT < 2:5391158/91‑1 TCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAATATATA < 1:662273/91‑1 TCACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAATATATA < 2:1302409/91‑1 CACTTTTGCGGTGAAGTATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAATATATAG < 2:5107075/91‑1 CACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAATATATAG < 1:4702419/91‑1 ACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAATATATAGA > 1:483924/1‑91 ACTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAATATATAGA > 2:1460366/1‑91 CTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAATAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAATATATAGAT > 2:120446/1‑91 CTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAATATATAGAT < 2:2525228/91‑1 CTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAATATATAGAT > 1:1240847/1‑91 CTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAATATATAGAT < 2:1634208/91‑1 CTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAATATATAGAT > 2:1501686/1‑91 ATTGTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGATAAAAAAAGATATAGGAGCATCCTTCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/65278‑65380‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcatccttcacTTTTGCGGTGAAGGATGCTCCTATATCTTTTTTTATCTAAAAAAACTATTAGTAATTAGTTTTAAAACATTTATCTTCTAATATATAGAT < USA300TCH1516_ALE/65387‑65298 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |