| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 65380 | 264 (0.880) | 20 (0.080) | 13/134 | NT | 8.0% | intergenic (+212/+43) | adhD/USA300HOU_RS00280 | Putative alcohol dehydrogenase D/hypothetical protein |
| ? | USA300TCH1516_ALE | = 65387 | 242 (0.970) | intergenic (+219/+36) | adhD/USA300HOU_RS00280 | Putative alcohol dehydrogenase D/hypothetical protein | |||||
Only 100 of 517 total aligned reads displayed.
CATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTAAG > USA300TCH1516_ALE/65290‑65470 | cATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCAC < 2:2413737‑M1/91‑1 (MQ=255) caacggtacttaacaatgatttacaaacaattattaatcattatctatcaaaatgaaaactatattctaataaaactaGAGCATCCTTCAc > 2:2480663‑M1/79‑91 (MQ=255) tttCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCg > 1:4194989/1‑91 (MQ=255) tttCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCg > 1:2445005/1‑91 (MQ=255) ttCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGc < 1:480965/91‑1 (MQ=255) ttCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGc < 2:2192366/91‑1 (MQ=255) ttCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGc < 1:5594072/91‑1 (MQ=255) ttCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGc < 1:3369521/91‑1 (MQ=255) ttCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGc > 2:4732791/1‑91 (MQ=255) cATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCaa > 2:2795560/1‑91 (MQ=255) atatCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTATTTTAGAT‑AAAAAAAGATATAGGAGCATCATTCATCGCaaa > 2:5845873/1‑91 (MQ=255) tatCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCaaaa > 1:1294583/1‑91 (MQ=255) tatCTATATATTAAAGGATAAATGTTTTAAAACTAATTACGAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACttttgcg < 2:5756450‑M1/91‑8 (MQ=255) tacttaacaatgatttacaaacaattattaatcattatctatcaaaatgaaaactatattctaataaaactaGAGCATCCTTCACCGCaaa > 2:4942961‑M1/73‑91 (MQ=255) aTCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAg < 2:2525228‑M2/91‑2 (MQ=255) tCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgt > 1:483924‑M2/1‑89 (MQ=255) tCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgt > 2:1460366‑M2/1‑89 (MQ=255) cttaacaatgatttacaaacaattattaatcattatctatcaaaatgaaaactatattctaataaaactaGAGCATCCTTCACCGCAAAAg > 2:4016369‑M1/71‑91 (MQ=255) taaatattagAAGATAAATGTTTTAAAACTAATTACTAATAGTTATATTAGAA‑AAAAAAAGATATAGGAGCATCCTTCACttttgcggtga < 2:5359011‑M1/88‑12 (MQ=255) atatatTAGAAGATAAATGTTTTAAAACTAATTACTAATAGGTTTTTTAGAT‑AAAAAAAGCTATAAGAGCATCCTTCTTCGCAATCgtgaa < 2:5391158‑M2/91‑6 (MQ=255) tatatTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAATATATAGGAGCATCCTTCACCGCAAAAgtgaag < 2:1085653‑M2/91‑7 (MQ=255) atatTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgtgaagg < 1:3179931‑M2/91‑8 (MQ=255) tAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAATATATAGGAGCATCCTTCACCGCAAAAgtgaaggatgc < 2:628537‑M2/91‑12 (MQ=255) tAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgtgaaggatgc > 2:287439‑M2/1‑80 (MQ=255) tAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgtgaaggatgc > 2:3082611‑M2/1‑80 (MQ=255) gatttacaaacaattattaatcattatctatcaaaatgaaaactatattctaataaaactaGAGCATCCTTCACCGCAAAAGTGAAGGATg > 1:163868‑M1/62‑91 (MQ=255) aagaTAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGctct > 1:1959242/1‑91 (MQ=255) agaTAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACttttgcggtgaaggatgctcct < 2:381085‑M1/91‑23 (MQ=255) gaTAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAg < 1:3843111/91‑1 (MQ=255) aaaTGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGttt > 1:3528520/1‑91 (MQ=255) aTGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTtta > 1:4514296/1‑91 (MQ=255) tGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTttat < 1:1034772/91‑1 (MQ=255) tGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTttat > 1:3707310/1‑91 (MQ=255) gTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTttatt < 1:4605374/91‑1 (MQ=255) tttAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAg < 2:5182448/91‑1 (MQ=255) aaCTAATTACTAATAGTTTTTTTAGATAAAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAata < 2:1287120/91‑1 (MQ=255) aCTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAAtata > 1:5197965/1‑91 (MQ=255) cTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAg < 1:429788/91‑1 (MQ=255) cTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAg < 2:2617902/91‑1 (MQ=255) cTAATTACTAATAGTTTTTATAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAg < 2:850230/91‑1 (MQ=255) aaTTACTAATAGTTTTTTTTTAT‑TTTTAAAGATATAGGAGCATCCTTCACCGCAAAATTGTAGGATGCTCTAGTTTTATTAGTTTATAGtt > 2:229886/1‑91 (MQ=255) aTTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGttt < 2:5108098/91‑1 (MQ=255) ttACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGtttt < 2:1875600/91‑1 (MQ=255) ttACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGtttt < 1:1482516/91‑1 (MQ=255) tACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTc < 1:1587746/91‑1 (MQ=255) cTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGACTATAGTTTTCAt > 2:4123246/1‑91 (MQ=255) cTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCAt < 2:1665013/91‑1 (MQ=255) aTAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCAtttt < 1:4156519/91‑1 (MQ=255) tAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCACCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTg < 1:4430770/91‑1 (MQ=255) ttttttAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTgatag < 2:3621551/91‑1 (MQ=255) ttttAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTgatagat < 1:3944710/91‑1 (MQ=255) ttttAGAT‑AAAAAAAGATATAGGAGCATCCTTAACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAGTATAGTTTTCATTTTgatagat < 2:4458725/91‑1 (MQ=255) aGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATg > 2:4427989/1‑91 (MQ=255) aGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATg < 1:5846972/91‑1 (MQ=255) aGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATg < 1:5253797/91‑1 (MQ=255) gAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGa > 1:1805334/1‑91 (MQ=255) gAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGa < 2:2088340/91‑1 (MQ=255) aT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgtgaaggatgctcttatatctttttttatctaaaaaaactattagtaattagttt < 1:5000561‑M2/91‑56 (MQ=255) aaaaaaaGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATta < 1:507884/91‑1 (MQ=255) aaaaaaGATATAGGGGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATtaa < 2:5257055/91‑1 (MQ=255) aaaaaaGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATtaa < 2:3305034/91‑1 (MQ=255) aaaaaaGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATtaa < 1:4387/91‑1 (MQ=255) aaaaaGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATtaat > 1:987791/1‑91 (MQ=255) aaaaaGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATtaat < 1:4042895/91‑1 (MQ=255) aaaaGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATtaata > 1:2622512/1‑91 (MQ=255) aaaGATATAGGAGCATCCTTCACCGCAGAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATtaataa > 2:3708083/1‑91 (MQ=255) aaGATATAGGAGCATCCTTCACcgcaaaagtgaaggatgctcctatatctttttttatctaaaaaaactattagtaattagttttaaaaca > 1:3055920‑M1/1‑22 (MQ=255) aaGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTaataat < 2:1765809/91‑1 (MQ=255) aGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAAtt > 1:327718/1‑91 (MQ=255) aGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAAtt < 2:3267033/91‑1 (MQ=255) gATATAGGAGCATCCTTCACCGCAAAAgtgaaggatgctcctatatctttttttatctaaaaaaactattagtaattagttttaaaacatt < 2:1601754‑M2/91‑65 (MQ=255) gATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAAttg > 2:3881164/1‑91 (MQ=255) gATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAAttg > 2:5031206/1‑91 (MQ=255) atatAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAAttgt < 2:2038544/91‑1 (MQ=255) ataGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAAttgttt > 1:1679527/1‑91 (MQ=255) taGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAAttgtttg < 1:2744407/91‑1 (MQ=255) taGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAAttgtttg > 1:763229/1‑91 (MQ=255) ggAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTa < 1:2531704/91‑1 (MQ=255) ggAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTCCCAGATAATGATTAATAATTGTTTGTa > 1:2203501/1‑91 (MQ=255) gAGCATCCTTCACttttgcggtgaaggatgctcctatatctttttttatctaaaaaaactattagtaattagttttaaaacatttatcttc > 1:1133309‑M1/1‑13 (MQ=255) gAGCATCCTTCACttttgcggtgaaggatgctcctatatctttttttatctaaaaaaactattagtaattagttttaaaacatttatcttc < 1:2038544‑M1/91‑79 (MQ=255) GCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAAt > 1:5120363‑M1/1‑91 (MQ=255) cATCCTTCACttttgcggtgaaggatgctcctatatctttttttatctaaaaaaactattagtaattagttttaaaacatttatcttctaa > 2:3151782‑M1/1‑10 (MQ=255) cATCCTTCACttttgcggtgaaggatgctcctatatctttttttatctaaaaaaactattagtaattagttttaaaacatttatcttctaa < 1:1222221‑M1/91‑82 (MQ=255) CATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATc > 2:4595576‑M1/1‑91 (MQ=255) CATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATc > 1:1398524‑M1/1‑91 (MQ=255) CATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATc > 1:5499164‑M1/1‑91 (MQ=255) aTCCTTCACttttgcggtgaaggatgctcctatatctttttttatctaaaaaaactattagtaattagttttaaaacatttatcttctaat > 1:5346989‑M1/1‑9 (MQ=255) CTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTg < 2:3457043‑M1/91‑1 (MQ=255) CTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTg < 1:2889603‑M1/91‑1 (MQ=255) tCACttttgcggtgaaggatgctcctatatctttttttatctaaaaaaactattagtaattagttttaaaacatttatcttctaatatata < 1:662273‑M1/91‑88 (MQ=255) TCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGtt > 2:913128‑M1/1‑91 (MQ=255) TCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGtt < 2:5546435‑M1/91‑1 (MQ=255) TCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGtt < 2:300718‑M1/91‑1 (MQ=255) TCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGtt > 2:4281838‑M1/1‑91 (MQ=255) cACttttgcggtgaaggatgctcctatatctttttttatctaaaaaaactattagtatttagttttacaacttttatcttctaatatatag > 2:4790966‑M1/1‑3 (MQ=255) cACttttgcggtgaaggatgctcctatatctttttttatctaaaaaaactattagtaattagttttaaaacatttatcttctaatatatag < 1:4702419‑M1/91‑89 (MQ=255) CACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTa > 2:1354911‑M1/1‑91 (MQ=255) cttttgcggtgaaggatgctcctatatctttttttatctaaataaactattagtaattagttttaaaacatttatcttctaatatatagat > 2:120446‑M1/1‑1 (MQ=255) CCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTAAg > 1:3645332‑M1/1‑91 (MQ=255) | CATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTAAG > USA300TCH1516_ALE/65290‑65470 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |