| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 65380 | 264 (0.880) | 20 (0.080) | 13/134 | NT | 8.0% | intergenic (+212/+43) | adhD/USA300HOU_RS00280 | Putative alcohol dehydrogenase D/hypothetical protein |
| ? | USA300TCH1516_ALE | = 65387 | 242 (0.970) | intergenic (+219/+36) | adhD/USA300HOU_RS00280 | Putative alcohol dehydrogenase D/hypothetical protein | |||||
Only 100 of 441 total aligned reads displayed.
TATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTAAGTACCGT > USA300TCH1516_ALE/65297‑65476 | aTCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAg < 2:2525228‑M2/91‑2 (MQ=255) tCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgt > 2:1460366‑M2/1‑89 (MQ=255) cttaacaatgatttacaaacaattattaatcattatctatcaaaatgaaaactatattctaataaaactaGAGCATCCTTCACCGCAAAAg > 2:4016369‑M1/71‑91 (MQ=255) cttaacaatgatttacaaacaattattaatcattatctatcaaaatgaaaactatattctaataaaactaGAGCATCCTTCACCGCAAAAg > 2:5861492‑M1/71‑91 (MQ=255) cTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgtg < 1:4702419‑M2/91‑4 (MQ=255) tatataTTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgtga < 1:662273‑M2/91‑5 (MQ=255) atatatTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgtgaa > 1:1462657‑M2/1‑86 (MQ=255) tatatTAGAAGATAAATGTTTTAAAGCTAATTACTAATAGTTTTTTTAGCT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgtgaag > 2:5429117‑M2/1‑85 (MQ=255) tatatTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAATATATAGGAGCATCCTTCACCGCAAAAgtgaag < 2:1085653‑M2/91‑7 (MQ=255) atTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgtgaaggat > 1:4496256‑M2/1‑82 (MQ=255) ttAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑ATAAAAATATATAGAAGCATACTTCACCGCAAAAgtgaaggatg < 2:4436161‑M2/91‑11 (MQ=255) ttAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgtgaaggatg < 1:1222221‑M2/91‑11 (MQ=255) tAGAAGATAAATGTTTTAAATCTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgtgaaggatgc > 2:4764990‑M2/1‑80 (MQ=255) tAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgtgaaggatgc > 2:287439‑M2/1‑80 (MQ=255) atttacaaacaattattaatcattatctatcaaaatgaaaactatattctaataaaactaGAGCATCCTTCACCGCAAAAGTGAAGGATGc > 1:1654220‑M1/61‑91 (MQ=255) agaagaTAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgtgaaggatgct < 1:4422843‑M2/91‑13 (MQ=255) gaagaTAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgtgaaggatgctc > 1:1518153‑M2/1‑78 (MQ=255) agaTAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTa < 1:5784407/91‑1 (MQ=255) aTAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGt < 2:2147355/91‑1 (MQ=255) tAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGtt > 2:4209043/1‑91 (MQ=255) aaTGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGtttt > 1:2134395/1‑91 (MQ=255) tGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACTTTTGCGgtgaaggatgctcctatatctt > 1:3055920‑M2/1‑69 (MQ=255) tGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTttat > 1:5342617/1‑91 (MQ=255) tGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTttat < 1:559105/91‑1 (MQ=255) tGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTttat < 1:1034772/91‑1 (MQ=255) tGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTttat > 1:3707310/1‑91 (MQ=255) tttAAAACTAATTACTAATAGTTTTTTTTTTT‑AATTTTAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAg > 2:535708/1‑91 (MQ=37) tttAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAg < 2:5182448/91‑1 (MQ=255) aaaaCTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAat > 1:5081703/1‑91 (MQ=255) aaaaCTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAat > 1:3655791/1‑91 (MQ=255) aaaaCTAATTACTAAGAGTTTTGTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAat < 2:5761799/91‑1 (MQ=255) aaaCTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAata > 1:1353912/1‑91 (MQ=255) aaaCTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAata < 2:1824925/91‑1 (MQ=255) aaCTAATTACTAATAGTTTTTTTAGATAAAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAata < 2:1287120/91‑1 (MQ=255) aaCTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAatat > 1:5006498/1‑91 (MQ=255) aCTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAAtata > 1:5197965/1‑91 (MQ=255) aCTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAAtata < 2:2334934/91‑1 (MQ=255) cTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAg < 2:2617902/91‑1 (MQ=255) cTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAg < 1:3588387/91‑1 (MQ=255) cTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAg < 1:2935160/91‑1 (MQ=255) cTAATTACTAATAGTTTTTATAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAg < 2:850230/91‑1 (MQ=255) tAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGt > 2:2803491/1‑91 (MQ=255) tAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGt > 1:4140230/1‑91 (MQ=255) aaTTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGtt > 1:273343/1‑91 (MQ=255) aTTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGttt > 1:3186026/1‑91 (MQ=255) ttACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGtttt < 2:1875600/91‑1 (MQ=255) tACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTc > 1:2349562/1‑91 (MQ=255) aCTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCa < 1:1943825/91‑1 (MQ=255) cTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATCTAGTTTTCAt > 2:5111591/1‑91 (MQ=255) cTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCAt < 2:1665013/91‑1 (MQ=255) aGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTga < 1:2559287/91‑1 (MQ=255) tttttAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTgataga > 2:4951660/1‑91 (MQ=255) tttttAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTgataga < 1:1075234/91‑1 (MQ=255) ttttAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTgatagat < 1:1756329/91‑1 (MQ=255) ttttAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTgatagat > 2:3088493/1‑91 (MQ=255) ttttAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTgatagat < 1:3944710/91‑1 (MQ=255) ttttAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTCTTCATTTTgatagat > 1:3305034/1‑91 (MQ=255) tAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAAt > 2:205638/1‑91 (MQ=255) gAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGa > 1:1629272/1‑91 (MQ=255) aT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGAt < 1:4183604/91‑1 (MQ=255) t‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGAtt < 1:719447/91‑1 (MQ=255) aaaaaaaGATATCGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATta < 2:3756893/91‑1 (MQ=255) aaaaaaGATATAGGGGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATtaa < 2:5257055/91‑1 (MQ=255) aaaaaGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATtaat < 1:4042895/91‑1 (MQ=255) aaaaaGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATtaat < 2:2466670/91‑1 (MQ=255) aaaaaGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATCATtaat > 1:4913956/1‑91 (MQ=255) aaaaGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATtaata < 1:2487446/91‑1 (MQ=255) aaGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTaataat < 1:4262778/91‑1 (MQ=255) aGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAAtt < 2:3267033/91‑1 (MQ=255) gATATAGGAGCATCCTTCACCGCAAAAgtgaaggatgctcctatatctttttttatctaaaaaaactattagtaattagttttaaaacatt < 2:1601754‑M2/91‑65 (MQ=255) gATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAAttg > 2:3881164/1‑91 (MQ=255) gATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAAttg > 2:639003/1‑91 (MQ=255) gATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAAttg > 2:5052449/1‑91 (MQ=255) atatAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATCATGATTAATAAttgt > 2:4527202/1‑91 (MQ=255) aGCATCCTTCACCGCAAAAgtgaaggatgctcctatatctttttttatctaaaaaaactattagtaattagttttaaaacatttatcttct > 2:3678333‑M2/1‑19 (MQ=255) GCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAAt > 1:5133533‑M1/1‑91 (MQ=255) CATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATc > 1:5499164‑M1/1‑91 (MQ=255) CCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCAtt > 2:4367859‑M1/1‑91 (MQ=255) CTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGATTATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTg > 2:3440272‑M1/1‑91 (MQ=255) TTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGt < 1:2003067‑M1/91‑1 (MQ=255) TCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGtt < 2:300718‑M1/91‑1 (MQ=255) TCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGtt < 2:4620624‑M1/91‑1 (MQ=255) CACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTa > 2:3303337‑M1/1‑91 (MQ=255) CACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTa > 1:387686‑M1/1‑91 (MQ=255) CACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTa < 1:5246369‑M1/91‑1 (MQ=255) ACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTaa < 1:341304‑M1/91‑1 (MQ=255) ccGCAAAAgtgaaggatgctcttatatctttttttatctaaaaaaactattagtaattagttttaaaacatttatcttctaatatatagat < 1:4736535‑M2/91‑84 (MQ=255) ccGCAAAAgtgaaggatgctcctatatctttttttatctaaaaaaactattagtaattagttttaaaacatttatcttctaatatatagat < 2:2294638‑M2/91‑84 (MQ=255) CCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCGTTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTAAg > 2:5679630‑M1/1‑91 (MQ=255) CCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTAAg > 1:4579872‑M1/1‑91 (MQ=255) cGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTAAGt > 2:3569893/1‑91 (MQ=255) cGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTAAGt > 2:491398/1‑91 (MQ=255) gCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTAAGTa > 2:3146346/1‑91 (MQ=255) cAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTAAGTAc < 1:4330460/91‑1 (MQ=255) cAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTAAGTAc < 1:984235/91‑1 (MQ=255) tgcagtgaaggatgctcctatatctttttttatctaaaaaaactattagtaattagttttaaaacatttatcttctaatatatagatatga > 2:1167864‑M2/4‑4 (MQ=255) aaaaGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTAAGTAcc > 2:4083308/1‑91 (MQ=255) aaaaGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTAAGTAcc < 2:1335707/91‑1 (MQ=255) aaaaGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTAAGTAcc < 2:895484/91‑1 (MQ=255) aaaGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTAAGTACCg > 1:2766234/1‑91 (MQ=255) | TATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAAATCATTGTTAAGTACCGT > USA300TCH1516_ALE/65297‑65476 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |