| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1903758 = | 240 (0.800) | 11 (0.050) | 7/124 | NT | 6.8% | intergenic (+212/+83) | arsC/atl_2 | Glutaredoxin arsenate reductase/Bifunctional autolysin |
| ? | USA300TCH1516_ALE | 1903801 = | 115 (0.500) | intergenic (+255/+40) | arsC/atl_2 | Glutaredoxin arsenate reductase/Bifunctional autolysin | |||||
Only 100 of 149 total aligned reads displayed.
TGACAGTAAACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < USA300TCH1516_ALE/1903865‑1903758‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatagaaagcgtctttttAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGAAGT > USA300TCH1516_ALE/1903801‑1903890 TGACAGTAAACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTG > 1:1228701/1‑91TGACAGTAAACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTG > 1:634015/1‑91 GACAGTAAACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGA > 1:4314482/1‑91 GACAGTAAACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGA < 1:2327004/91‑1 ACAGTAAACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGAT < 1:1171863/91‑1 AGTAAACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAG > 2:5781642/1‑91 AGTAAACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAG > 1:1815524/1‑91 GTAAACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGA > 1:2167347/1‑91 GTAAACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGA > 1:2215532/1‑91 TAAACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAA > 2:2237845/1‑91 TAAACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAA < 1:2686692/91‑1 AAACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAA < 2:3869664/91‑1 AAACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAA < 1:5101723/91‑1 AACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGTACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAG < 2:3941660/91‑1 AACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAG < 2:5635777/91‑1 AACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAG > 2:400717/1‑91 AACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAG < 1:2218992/91‑1 ACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGC > 1:1412208/1‑91 ACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGC < 1:5722339/91‑1 ACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGC > 1:1006702/1‑91 ACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGC < 1:983390/91‑1 ACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGC < 2:1964938/91‑1 ACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGC < 2:5746582/91‑1 ACATTTGAATAAGTAATTTGATAAGCTAAGAGTTGTTTTTATGACTCGGACATACTAAACAGACGCTTTCTATCTTGTTTTGATAGAAAGC < 2:1187489/91‑1 CATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCG > 1:573247/1‑91 CATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCG < 1:3279364/91‑1 CATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCG < 1:3477363/91‑1 CATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCG > 1:3592824/1‑91 CATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCG < 2:2866544/91‑1 CATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCG > 2:2729948/1‑91 CATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCG < 2:618638/91‑1 ATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGT < 2:4499336/91‑1 ATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGT < 2:3233261/91‑1 TTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATCCTAAAAAGACGCTTTCTATCTTGTTTTGCTAGAATGCGTC > 2:4631660/1‑91 TTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTC < 1:3069101/91‑1 TTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTC < 1:2800947/91‑1 TTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCT > 2:2928937/1‑91 TTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCT > 1:1282591/1‑91 TTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCT > 2:2272577/1‑91 TGAATAAGTAGTTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCCTTCTATCTTGTTCTGATAGTAAGCGTCTT < 1:5371271/91‑1 TGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCTGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTT < 2:699642/91‑1 TGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAGAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTT < 2:3442986/91‑1 TGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTT < 2:4234909/91‑1 TGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTT > 1:3891543/1‑91 TGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTT > 1:866542/1‑91 TGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTT > 1:968581/1‑91 TGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTT < 1:1324931/91‑1 GAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTTT > 1:233268/1‑91 AATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTTTT < 2:2548307/91‑1 AATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTTTT < 1:195310/91‑1 AATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTTTT > 1:265227/1‑91 AATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTTTT < 1:3502415/91‑1 AATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTTTT > 1:1513515/1‑91 ATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTTTTT < 1:5413644/91‑1 ATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTTTTT > 1:3714617/1‑91 ATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTTTTT > 1:1399384/1‑91 TTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTC > 1:1732963/1‑91 ACTCGGACATACTAAAAAGACGCTTTCTTTATTGTTTTGATAGAAAGCGTCATTTTAGTATGTACGAGTCATAAAAACAACTCGTAGCTTA > 2:2896316/1‑91 ACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAAT > 2:46685/1‑91 ACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAAT > 2:46875/1‑91 CGCTTTCTATCTTGTTTTGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATG > 1:3475104/1‑91 TATCTTGTTTTGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTG > 1:3000234/1‑91 CTTGTTTTGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCA > 1:3512068/1‑91 TTGTTTTGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCAT > 2:4368033/1‑91 TTGTTTTGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCAT > 1:1724986/1‑91 GATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATA > 2:1739666/1‑91 ATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATAC < 1:3800330/91‑1 ATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATAC < 1:3208133/91‑1 ATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATAC < 2:3078784/91‑1 aAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACTACTCGTATCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACA < 2:786946/90‑1 TAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACA < 1:961497/91‑1 TAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACA > 2:3554558/1‑91 TAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACA < 2:4205392/91‑1 AGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACAC < 1:3610367/91‑1 AGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACAC > 1:5529484/1‑91 AGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACAC > 2:4364122/1‑91 AGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACAC < 2:358410/91‑1 AGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACAC > 2:546075/1‑91 AGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACAC < 1:3712673/91‑1 AGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACAC < 1:4402263/91‑1 GAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACA > 1:45448/1‑91 GAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACA > 2:1300260/1‑91 AAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAA < 1:70828/91‑1 AAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAA < 2:3512068/91‑1 AGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAG > 1:88585/1‑91 AGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAG < 2:5243178/91‑1 GTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTAT < 2:1172994/91‑1 CTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTT < 2:7950/91‑1 CTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTT > 1:1840599/1‑91 CTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTT < 2:2046296/91‑1 TTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATAGACAAAGTATTTG > 2:3781027/1‑91 TTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTG > 2:4495169/1‑91 TTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGA < 2:2481368/91‑1 TTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGA > 1:3049580/1‑91 TTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGAA > 2:4867605/1‑91 TTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGAA > 1:4445572/1‑91 TTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGAA < 1:3907339/91‑1 TTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGAAG > 2:4823774/1‑91 TTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGAAG < 1:4106174/91‑1 TAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGAAGT > 1:1343874/1‑91 TGACAGTAAACATTTGAATAAGTAATTTGATAAGCTACGAGTTGTTTTTATGACTCGGACATACTAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < USA300TCH1516_ALE/1903865‑1903758‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatagaaagcgtctttttAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGAAGT > USA300TCH1516_ALE/1903801‑1903890 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |