| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 65368 = | 276 (0.920) | 20 (0.080) | 13/134 | NT | 7.8% | intergenic (+200/+55) | adhD/USA300HOU_RS00280 | Putative alcohol dehydrogenase D/hypothetical protein |
| ? | USA300TCH1516_ALE | 65401 = | 242 (0.970) | intergenic (+233/+22) | adhD/USA300HOU_RS00280 | Putative alcohol dehydrogenase D/hypothetical protein | |||||
Only 100 of 514 total aligned reads displayed.
ATTGTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAA > USA300TCH1516_ALE/65278‑65458 | aTTGTACTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAGAGATATAGG < 2:5369322‑M1/91‑1 (MQ=255) ttGTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGA < 1:4753413‑M1/91‑1 (MQ=255) tgactctattacaacggtacttaacaatgatttacaaacaattattaatcattatctatcaaaatgaaaactatattctaataaaactaga < 2:833598‑M1/2‑1 (MQ=255) tGTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAG < 1:2347145‑M1/91‑1 (MQ=255) tATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTATTT‑ATATAAAGATATAGGAGCA > 2:5333204‑M1/1‑91 (MQ=255) tATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCA < 1:3095004‑M1/91‑1 (MQ=255) ctctattacaacggtacttaacaatgatttacaaacaattattaatcattatctatcaaaatgaaaactatattctaataaaactaGAGCa < 2:2028449‑M1/5‑1 (MQ=255) tattacaacggtacttaacaatgatttacaaacaattattaatcattatctatcaaaatgaaaactatattctaataaaactaGAGCATcc > 1:4858101‑M1/84‑91 (MQ=255) attacaacggtacttaacaatgatttacaaacaattattaatcattatctatcaaaatgaaaactatattctaataaaactaGAGCATCCt < 2:911365‑M1/9‑1 (MQ=255) attacaacggtacttaacaatgatttacaaacaattattaatcattatctatcaaaatgaaaactatattctaataaaactaGAGCATCCt > 1:2962496‑M1/83‑91 (MQ=255) ttacaacggtacttaacaatgatttacaaacaattattaatcattatctatcaaaatgaaaactatattctaataaaactaGAGCATCCtt > 1:4410418‑M1/82‑91 (MQ=255) tACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTC < 1:1163159‑M1/91‑1 (MQ=255) tACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTC < 2:722879‑M1/91‑1 (MQ=255) tACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTC > 1:5029570‑M1/1‑91 (MQ=255) aCATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCA < 1:1111170‑M1/91‑1 (MQ=255) aCATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCA > 2:5046106‑M1/1‑91 (MQ=255) cATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCAC > 1:3260015‑M1/1‑91 (MQ=255) cATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCAC > 1:3281181‑M1/1‑91 (MQ=255) cATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCAC < 2:2413737‑M1/91‑1 (MQ=255) cATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCAC > 1:4367859‑M1/1‑91 (MQ=255) acaacggtacttaacaatgatttacaaacaattattaatcattatctatcaaaatgaaaactatattctaataaaactaGAGCATCCTTCa < 2:1654220‑M1/12‑1 (MQ=255) acaacggtacttaacaatgatttacaaacaattattaatcattatctatcaaaatgaaaactatattctaataaaactaGAGCATCCTTCa < 1:3655223‑M1/12‑1 (MQ=255) caacggtacttaacaatgatttacaaacaattattaatcattatctatcaaaatgaaaactatattctaataaaactaGAGCATCCTTCAc > 2:3609118‑M1/79‑91 (MQ=255) aTTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCAcc > 1:1594565/1‑91 (MQ=255) ttCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTATTT‑AATTATAGATATAGGAGCATCCTTCACCGc > 2:3863980/1‑91 (MQ=255) ttCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACtgc > 2:4637638‑M1/1‑88 (MQ=255) ttCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGc < 1:3369521/91‑1 (MQ=255) ttCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGc < 2:4865771/91‑1 (MQ=255) aTCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAg > 2:1501686‑M2/1‑90 (MQ=255) aTCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTATTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAg > 2:120446‑M2/1‑90 (MQ=255) cttaacaatgatttacaaacaattattaatcattatctatcaaaatgaaaactatattctaataaaactgGAGCATCCTTCACCGCAAAAg > 2:5009312‑M1/71‑91 (MQ=255) cttaacaatgatttacaaacaattattaatcattatctatcaaaatgaaaactatattctaataaaactaGAGCATCCTTCACCGCAAAAg > 2:5861492‑M1/71‑91 (MQ=255) cTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgtg < 1:4702419‑M2/91‑4 (MQ=255) cTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATACTTCACCGCAAAAgtg < 2:5107075‑M2/91‑4 (MQ=255) tAGAAGATAAATGTTTTAAATCTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgtgaaggatgc > 2:4764990‑M2/1‑80 (MQ=255) agaagaTAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgtgaaggatgct < 1:5318380‑M2/91‑13 (MQ=255) agaagaTAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgtgaaggatgct > 1:618519‑M2/1‑79 (MQ=255) gaagaTAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgtgaaggatgctc < 2:5684478‑M2/91‑14 (MQ=255) aaagatAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAgtgaaggatgctc > 2:1943851‑M2/2‑78 (MQ=255) ttacaaacaattattaatcattatctatcaaaatgaaaactatattctaataaaactaGAGCATCCTTCACCGCAAAAGTGAAGGATGctc > 1:4186236‑M1/59‑91 (MQ=255) agaTAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTa < 1:5784407/91‑1 (MQ=255) aatAAATGTTTTAAAACTAATTACTAATAATTTTTTTAGAG‑AAAAAAAGATATAAGAGCATCCTTCACttttgcggtgaaggatgctccta < 1:38120‑M1/90‑24 (MQ=255) tAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGtt > 2:4209043/1‑91 (MQ=255) tAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGtt < 1:520774/91‑1 (MQ=255) aaaTGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGttt > 1:3528520/1‑91 (MQ=255) aaaTGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGtct > 1:5150856/1‑89 (MQ=255) tGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTttat > 2:169607/1‑91 (MQ=255) tGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTttat < 1:1034772/91‑1 (MQ=255) tGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTttat < 1:4466711/91‑1 (MQ=255) tGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTttat < 1:559105/91‑1 (MQ=255) gTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTttatt > 2:3132552/1‑91 (MQ=255) tttAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAg < 1:275763/91‑1 (MQ=255) tttAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAg < 2:5182448/91‑1 (MQ=255) tttAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAACATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAg > 2:3012212/1‑91 (MQ=255) aaaaCTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAat > 1:1302603/1‑91 (MQ=255) aaaaCTAATTACTAAGAGTTTTCTTATAT‑AAAAAAAGATATAGGAACATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAat < 2:5762046/91‑1 (MQ=255) aaaCTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACTTTTGCGgtgaaggatgctcctatatctttttttat > 2:3398177‑M2/1‑62 (MQ=255) aaaCTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAata < 2:1824925/91‑1 (MQ=255) aaaCTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAAGAGCATCCTTCACttttgcggtgaaggatgctcctatatctttttttat < 1:5000561‑M1/91‑37 (MQ=255) aaCTAATTACTAATAGTTTTTTTAGATAAAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAata < 2:1287120/91‑1 (MQ=255) cTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAg < 2:2617902/91‑1 (MQ=255) tAATTACTAATAGTTTTTTTGGAT‑AAAAAAAGATATAGTAGCATCCTTCACTGCAAAAGTTAAGGATGCTCTAGTTTTACTAGCAaatact > 2:1016602/1‑89 (MQ=255) tAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGt > 2:2803491/1‑91 (MQ=255) aaTTACTAATAGTTTTTTTTTTT‑TTTTTTAGATATAGGAGCATCCTTCACCGCACAAGTGAAGGATGCTTTAGTTTTATTAGCATATAGtt > 2:231239/1‑91 (MQ=255) aTTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGttt > 2:2483700/1‑91 (MQ=255) aTTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGttt < 1:3681920/91‑1 (MQ=255) aTTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGttt < 1:4119994/91‑1 (MQ=255) ttACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGtttt < 1:2479713/91‑1 (MQ=255) ttACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGtttt > 1:2683410/1‑91 (MQ=255) aCTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCa > 1:1491319/1‑91 (MQ=255) cTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCAt > 1:1647754/1‑91 (MQ=255) tAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCAtt > 1:709960/1‑91 (MQ=255) tatctttttttATCT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCAtttt > 2:254634/5‑91 (MQ=39) aGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTga < 1:2559287/91‑1 (MQ=255) tttttAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTgataga < 1:1957574/91‑1 (MQ=255) ttttAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTgatagat > 2:1363272/1‑91 (MQ=255) aGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATg > 2:4427989/1‑91 (MQ=255) tatattctaataaaactaGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATg > 1:4550685‑M1/19‑91 (MQ=255) gAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGa > 1:1805334/1‑91 (MQ=255) gAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGa > 2:2197001/1‑91 (MQ=255) gAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGa < 2:2088340/91‑1 (MQ=255) aT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGAt > 1:877802/1‑91 (MQ=255) aaaaaaaGATATCGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATta < 2:3756893/91‑1 (MQ=255) aaaaaaGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGGTGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATtaa < 2:5467716/91‑1 (MQ=255) aaaaaaGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATtaa < 1:1699437/91‑1 (MQ=255) aaaaaaGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATtaa < 2:5258456/91‑1 (MQ=255) aaaaGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATtaata < 2:293680/91‑1 (MQ=255) aaaGATATAGGAGCATCCTTCACCGCAGAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATtaataa > 2:3708083/1‑91 (MQ=255) aaGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTaataat < 1:4262778/91‑1 (MQ=255) aGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAAtt > 1:5401283/1‑91 (MQ=255) aGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAAtt < 1:4007582/91‑1 (MQ=255) aGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAAtt < 2:3267033/91‑1 (MQ=255) gATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAAttg > 1:1457657/1‑91 (MQ=255) tataGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAAttgtt > 2:4021524/1‑91 (MQ=255) ataGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAAttgttt > 2:3899995/1‑91 (MQ=255) taGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAAttgtttt > 2:446317/1‑90 (MQ=255) taGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAAttgtttg < 1:2197001/91‑1 (MQ=255) ggAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTa < 1:3897939/91‑1 (MQ=255) gAGCATCCTTCACttttgcggtgaaggatgctcctatatctttttttatctaaaaaaactattagtaattagttttaaaacatttatcttc < 1:2038544‑M1/91‑79 (MQ=255) GAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTaa > 2:2182177‑M1/1‑91 (MQ=255) | ATTGTATTTTTACATTTCATATCTATATATTAGAAGATAAATGTTTTAAAACTAATTACTAATAGTTTTTTTAGAT‑AAAAAAAGATATAGGAGCATCCTTCACCGCAAAAGTGAAGGATGCTCTAGTTTTATTAGAATATAGTTTTCATTTTGATAGATAATGATTAATAATTGTTTGTAA > USA300TCH1516_ALE/65278‑65458 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |