| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 263532 | 265 (0.890) | 18 (0.070) | 12/140 | NT | 7.1% | intergenic (+31/‑305) | pflA/ugpQ_2 | Pyruvate formate‑lyase‑activating enzyme/Glycerophosphodiester phosphodiesterase, cytoplasmic |
| ? | USA300TCH1516_ALE | = 263550 | 242 (0.930) | intergenic (+49/‑287) | pflA/ugpQ_2 | Pyruvate formate‑lyase‑activating enzyme/Glycerophosphodiester phosphodiesterase, cytoplasmic | |||||
Only 100 of 437 total aligned reads displayed.
GCTGTTAAAGCAGCCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAA > USA300TCH1516_ALE/263442‑263622 | aaacgtcttccttcaaccattgtagaagttgtctcatatacttactacgtcttgctaatactcaatactcaattgaaaaagAAGCATATGc < 2:3411330‑M1/10‑1 (MQ=255) cTGTTAAAGCAGCCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATGAATACAATTCAGACCGAAAAGAAAGCATATGCa < 1:5786227/91‑1 (MQ=255) cTGTTAAAGCAGCCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCa < 2:4595071/91‑1 (MQ=255) aaaGCAGCCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTc < 1:5127151/91‑1 (MQ=255) aaaGCAGCCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTc > 2:2116123/1‑91 (MQ=255) aaGCAGCCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCa < 2:803132/91‑1 (MQ=255) aaGCAGCCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCa > 2:5480192/1‑91 (MQ=255) aaGCAGCCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCa < 1:1941241/91‑1 (MQ=255) cagcCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAaga > 1:3065779/1‑91 (MQ=255) agcCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCTACTTCAagag < 2:4869321/91‑1 (MQ=255) agcCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAagag > 1:2576225/1‑91 (MQ=255) gcCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGt > 1:2006118/1‑91 (MQ=255) cTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGa > 1:3411330/1‑91 (MQ=255) tACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGaa < 1:806845/91‑1 (MQ=255) tACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGaa > 2:3638639/1‑91 (MQ=255) ccattgtagaagttgtctcatatacttactacgtcttgctaatactcaatactcaattgaaaaagAAGCATATGCAACTTCAAGAGTGAAg > 1:4841340‑M1/66‑91 (MQ=255) ccGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAgg < 1:5413927/91‑1 (MQ=255) cGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCcccttcactcttgaagtt < 2:4399948‑M1/91‑19 (MQ=255) cGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAggg > 1:129056/1‑91 (MQ=255) gTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGg > 2:2696213‑M2/1‑90 (MQ=255) ttATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCcccttcactcttgaagttgc < 1:3833615‑M1/91‑21 (MQ=255) ttATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgc > 2:578147‑M2/1‑89 (MQ=255) aTGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAATCATATGCAACTTCAAGAGTGAAGGGgcat < 1:5171386‑M2/91‑5 (MQ=255) aTGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcat < 1:5225917‑M2/91‑5 (MQ=255) tGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcata > 2:1049958‑M2/1‑86 (MQ=255) gTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatat > 1:1456686‑M2/1‑85 (MQ=255) tAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCcccttcactcttgaagttgcatatgc < 1:3667421‑M1/91‑27 (MQ=255) agttgtctcatatacttactacgtcttgctaatactcaatactcaattgaaaaagAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGc > 1:569063‑M1/56‑91 (MQ=255) aaCTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatgct < 2:2257660‑M2/91‑10 (MQ=255) aaCTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatgct < 2:5168663‑M2/91‑10 (MQ=255) aCTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGACAAGAAAGCATATGCcccttcactcttgaagttgcatatgctt < 2:1185831‑M1/91‑29 (MQ=255) aCTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatgctt < 2:3596669‑M2/91‑11 (MQ=255) aCTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatgctt > 2:667611‑M2/1‑81 (MQ=255) ttCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGcttct > 2:3307286/1‑91 (MQ=255) cAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCttt < 2:1714117/91‑1 (MQ=255) cAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCttt < 2:4970100/91‑1 (MQ=255) cAAAGGGAAAAGTCCCGTTGAATTATAAATACAATTCAGACGGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCTTATGCTTCttt < 2:5837050/91‑1 (MQ=255) aaaGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCtttt < 1:43144/91‑1 (MQ=255) aaGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCttttt > 1:2974555/1‑91 (MQ=255) aGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatgctttcttttc < 1:2511260‑M2/91‑18 (MQ=255) aGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTc > 2:2488332/1‑91 (MQ=255) aGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTc > 1:141665/1‑91 (MQ=255) gAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAat < 1:4428959/91‑1 (MQ=255) aaaaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAatt > 2:888187/1‑91 (MQ=255) aaaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattg > 2:5345745/1‑91 (MQ=255) aaaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattg < 2:1911063/91‑1 (MQ=255) aaaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattg < 2:5694614/91‑1 (MQ=255) aaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattga > 1:1081719/1‑91 (MQ=255) aTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgag > 1:289491/1‑91 (MQ=255) tCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagta < 2:2313234/91‑1 (MQ=255) ccGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtatt < 2:397997/91‑1 (MQ=255) cGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtattg > 2:3667525/1‑91 (MQ=255) cGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtattg < 1:4179661/91‑1 (MQ=255) ttGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtattgag < 2:1081719/91‑1 (MQ=255) ttGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtattgag < 2:1474981/91‑1 (MQ=255) tGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtattgagt < 2:452286/91‑1 (MQ=255) tGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtattgagt < 2:5128832/91‑1 (MQ=255) gAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAAttgagtattgagta < 1:4770822/91‑1 (MQ=255) aTTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTgagtattgagtatt > 1:4005832/1‑91 (MQ=255) ataAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGc > 1:2400024/1‑91 (MQ=255) aaTACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATGGAGTATTGAGTATTAGCAAg < 1:5345237/91‑1 (MQ=255) tACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGAc < 1:1031089/91‑1 (MQ=255) aCAATTCTGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACg < 1:4649974/91‑1 (MQ=255) cAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACgt < 2:2073577/91‑1 (MQ=255) cAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACgt > 2:5092592/1‑91 (MQ=255) aTTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACgtag > 1:1376318/1‑91 (MQ=255) aTTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACgtag < 1:594892/91‑1 (MQ=255) aTTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACgtag < 2:4773921/91‑1 (MQ=255) aTTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACgtag > 1:374629/1‑91 (MQ=255) ttCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACgtagt < 2:1608034/91‑1 (MQ=255) ttCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACgtagt < 2:1397427/91‑1 (MQ=255) ttCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACgtagt < 1:3852697/91‑1 (MQ=255) tCAGACCGAAAATAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACgtagta < 2:3890655/91‑1 (MQ=255) gACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTagtaagt > 1:5582139/1‑91 (MQ=255) gACCGAAAAGAAAGCATATGCAACTACAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTCGCAAGACGTagtaagt > 2:5568842/1‑91 (MQ=255) cGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGtata > 2:1785457/1‑91 (MQ=255) aaaaGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATg < 1:1007305/91‑1 (MQ=255) aaaaGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATg < 2:2607101/91‑1 (MQ=255) agaaagCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATgaga > 1:886118/1‑91 (MQ=255) gaaagCGTATGCAACTTCAAGAGTGAAGGGGCATATGCGTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGAc < 1:4883309/91‑1 (MQ=255) gaaagCATATGCAACTTCAAGAGTGAAGGGgcatatgcttctttttcggtctgaattgtatttataattcaacgggaattttccctttgaa < 1:1677749‑M2/91‑62 (MQ=255) aaagCATATGCAACTTCAAGAGTGAAGGGgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaag < 1:2202034‑M2/91‑63 (MQ=255) aagCATATGCAACTTCAAGAGTGAAGGGgcatatgcttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagtt < 2:658893‑M2/91‑64 (MQ=255) agCATATGCcccttcactcttgaagttgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagtt < 1:3180363‑M1/91‑83 (MQ=255) agCATATGCcccttcactcttgaagttgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagtt > 2:1011390‑M1/1‑9 (MQ=255) agCATATGCcccttcactcttgaagttgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagtt < 1:247754‑M1/91‑83 (MQ=255) agCATATGCAACTTCAAGAGTGAAGGGgcatatgcttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagtta < 1:3525769‑M2/91‑65 (MQ=255) AGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAAc < 2:2896338‑M1/91‑1 (MQ=255) GCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACt > 1:3956521‑M1/1‑91 (MQ=255) GCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACt > 2:2004435‑M1/1‑91 (MQ=255) GCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACt < 2:4242834‑M1/91‑1 (MQ=255) cATATGCcccttcactcttgaagttgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaa < 2:4080556‑M1/91‑85 (MQ=255) cATATGCcccttcactcttgaagttgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaa > 2:4483150‑M1/1‑7 (MQ=255) CATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACtt < 1:180081‑M1/91‑1 (MQ=255) atatGCcccttcactcttgaagttgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaac > 1:4373101‑M1/1‑6 (MQ=255) tatGCcccttcactcttgaagttgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaaca > 1:3211886‑M1/1‑5 (MQ=255) atGCcccttcactcttgaagttgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaacat < 2:2994752‑M1/91‑88 (MQ=255) tGCcccttcactcttgaagttgcatatgcattcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaacata > 2:1897858‑M1/1‑3 (MQ=255) GCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACa > 2:3111363‑M1/1‑91 (MQ=255) CAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACaa > 1:2654890‑M1/1‑91 (MQ=255) | GCTGTTAAAGCAGCCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAA > USA300TCH1516_ALE/263442‑263622 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |