| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 263532 | 265 (0.890) | 18 (0.070) | 12/140 | NT | 7.1% | intergenic (+31/‑305) | pflA/ugpQ_2 | Pyruvate formate‑lyase‑activating enzyme/Glycerophosphodiester phosphodiesterase, cytoplasmic |
| ? | USA300TCH1516_ALE | = 263550 | 242 (0.930) | intergenic (+49/‑287) | pflA/ugpQ_2 | Pyruvate formate‑lyase‑activating enzyme/Glycerophosphodiester phosphodiesterase, cytoplasmic | |||||
Only 100 of 395 total aligned reads displayed.
CGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTGAAGGAAGACGTT > USA300TCH1516_ALE/263460‑263640 | tATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgca > 1:99918‑M2/1‑88 (MQ=255) aTGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcat < 1:5225917‑M2/91‑5 (MQ=255) tGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcata > 2:1049958‑M2/1‑86 (MQ=255) gTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATGCAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatat > 1:4844977‑M2/1‑85 (MQ=255) gTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatat > 1:4373101‑M2/1‑85 (MQ=255) ttAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCCACTTCAAGAGTGAAGGGgcatatg > 1:5669659‑M2/1‑84 (MQ=255) ttAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatg > 2:4483150‑M2/1‑84 (MQ=255) ttAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatg < 2:4080556‑M2/91‑8 (MQ=255) ttAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatg > 1:640633‑M2/1‑84 (MQ=255) ttAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatg > 2:3046259‑M2/1‑84 (MQ=255) aaCTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatgct < 2:2257660‑M2/91‑10 (MQ=255) aaCTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAACGGgcatatgct > 2:5815589‑M2/1‑82 (MQ=255) ttgtctcatatacttactacgtcttgctaatactcaatactcaattgaaaaagAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGctt > 1:184852‑M1/54‑91 (MQ=255) aCTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatgctt > 2:2523564‑M2/1‑81 (MQ=255) cTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGcttc < 2:5549483/91‑1 (MQ=255) cAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCttt < 2:1714117/91‑1 (MQ=255) cAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCttt < 1:1379277/91‑1 (MQ=255) cAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCttt < 2:4969751/91‑1 (MQ=255) cAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCttt < 1:4772353/91‑1 (MQ=255) cAAAGGGAAAATTCCCGTTGAATTATAAATACAATGCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCttt < 2:1991427/91‑1 (MQ=255) aaaGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCtttt < 2:2054559/91‑1 (MQ=255) aaGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCttttt > 1:2974555/1‑91 (MQ=255) gAAAATTCCCGTTGAATTATAAATACAATTCAGCCCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAat > 1:5813342/1‑91 (MQ=255) aaaaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAatt < 2:3340231/91‑1 (MQ=255) aaaaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAatt > 2:888187/1‑91 (MQ=255) aaaaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAatt > 1:3163445/1‑91 (MQ=255) aaaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattg < 2:726783/91‑1 (MQ=255) aaaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattg < 2:1911063/91‑1 (MQ=255) aaaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattg > 2:109253/1‑91 (MQ=255) aaaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattg < 1:5168663/91‑1 (MQ=255) aaaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattg > 2:5345745/1‑91 (MQ=255) aaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattga > 1:1081719/1‑91 (MQ=255) aTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgag > 2:1582919/1‑91 (MQ=255) aTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgag > 2:5074641/1‑91 (MQ=255) ttCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagt < 1:3813395/91‑1 (MQ=255) tCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagta < 2:2313234/91‑1 (MQ=255) cccGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtat < 1:3031143/91‑1 (MQ=255) ccGTTGAATTATCAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtatt < 2:3900952/91‑1 (MQ=255) ccGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtatt > 1:5783464/1‑91 (MQ=255) ccGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtatt > 2:2779959/1‑91 (MQ=255) cGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtattg > 1:3849465/1‑91 (MQ=255) tGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtattgagt < 2:1879156/91‑1 (MQ=255) tGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtattgagt < 2:452286/91‑1 (MQ=255) tGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtattgagt < 2:3628105/91‑1 (MQ=255) ataAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGc > 1:2902281/1‑91 (MQ=255) aaaTACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCaa > 2:5690010/1‑91 (MQ=255) aaTACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAg > 1:1321009/1‑91 (MQ=255) tACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGAc < 1:3995608/91‑1 (MQ=255) tACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGAc < 1:1031089/91‑1 (MQ=255) tACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGAc < 2:2635594/91‑1 (MQ=255) tACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGAc < 1:2468713/91‑1 (MQ=255) aCAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACg > 2:2437247/1‑91 (MQ=255) cAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACgt < 2:5163419/91‑1 (MQ=255) aTTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACgtag > 2:3724949/1‑91 (MQ=255) aTTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACgtag < 2:4773921/91‑1 (MQ=255) aTTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACgtag < 2:141665/91‑1 (MQ=255) ttCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACgtagt < 1:2697563/91‑1 (MQ=255) aGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTagtaag < 1:4734476/91‑1 (MQ=255) aGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTagtaag < 1:5045242/91‑1 (MQ=255) gACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTagtaagt > 1:5582139/1‑91 (MQ=255) aCCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTACTGACTATTAGCAAGACGTagtaagta > 2:5778029/1‑91 (MQ=255) cGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGtata > 2:1785457/1‑91 (MQ=255) gAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTATCAAGACGTAGTAAGTatat > 1:4498901/1‑91 (MQ=255) aaaaGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATg < 1:1007305/91‑1 (MQ=255) aagaaagCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATgag < 1:5396169/91‑1 (MQ=255) aaagCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACa > 2:4392490/1‑91 (MQ=255) aagCATATGCAACTTCAAGAGTGAAGGGgcatatgctttcttgtcggtctgaattgtatttataattcaacgggaattttccctttgaagt < 2:1185831‑M2/91‑64 (MQ=255) aagCATATGCAACTTCAAGAGTGAAGGGgcatatgcttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagtt < 2:658893‑M2/91‑64 (MQ=255) AGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAAc > 2:4594168‑M1/1‑91 (MQ=255) AGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAAc < 2:2896338‑M1/91‑1 (MQ=255) GCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACt > 2:4005832‑M1/1‑91 (MQ=255) CATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACtt > 2:2128878‑M1/1‑91 (MQ=255) CATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACtt > 1:4242834‑M1/1‑91 (MQ=255) TATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCt > 2:3179055‑M1/1‑91 (MQ=255) TATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCt > 1:1430408‑M1/1‑91 (MQ=255) GCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACa > 1:1232872‑M1/1‑91 (MQ=255) GCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACa > 1:1965803‑M1/1‑91 (MQ=255) aCTTCAAGAGTGAAGGGgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaacataacgg < 1:373712‑M2/91‑75 (MQ=255) aCTTCAAGAGTGAAGGGgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaacataacgg < 1:4094128‑M2/91‑75 (MQ=255) cTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATgg < 1:148060/91‑1 (MQ=255) cTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATgg > 1:1719354/1‑91 (MQ=255) ttCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGt < 1:2100442/91‑1 (MQ=255) cAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTg > 1:2129706/1‑91 (MQ=255) agagTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaa > 1:1647038/1‑91 (MQ=255) gagTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaag > 1:2788828/1‑91 (MQ=255) gagTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaag > 1:3322902/1‑91 (MQ=255) gagTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaag > 1:2578324/1‑91 (MQ=255) gagTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATACGAGACAACTTCTACAATGGTTgaag > 2:5435932/1‑91 (MQ=255) agTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaagg > 1:261142/1‑91 (MQ=255) gTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaagga > 1:4603919/1‑91 (MQ=255) gTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaagga < 1:3620762/91‑1 (MQ=255) tGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaaggaa < 2:4194673/91‑1 (MQ=255) tGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaaggaa < 1:861247/91‑1 (MQ=255) gAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaaggaag > 1:5330674/1‑91 (MQ=255) gAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaaggaag > 1:249765/1‑91 (MQ=255) gAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaaggaag > 1:3446601/1‑91 (MQ=255) gAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaaggaag < 1:1915018/91‑1 (MQ=255) gAAGGGGCATATGCTGCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaaggaag < 2:3401598/91‑1 (MQ=255) ggggCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTGAAGGAAGACg > 1:3934426/1‑91 (MQ=255) ggggCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTGAAGGAAGACg > 1:2333189/1‑91 (MQ=255) | CGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTGAAGGAAGACGTT > USA300TCH1516_ALE/263460‑263640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |