| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 326023 | 286 (0.960) | 15 (0.060) | 12/142 | NT | 5.3% | intergenic (‑27/+41) | USA300HOU_RS01460/USA300HOU_RS01465 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | = 326041 | 286 (1.080) | intergenic (‑45/+23) | USA300HOU_RS01460/USA300HOU_RS01465 | hypothetical protein/hypothetical protein | |||||
Only 100 of 409 total aligned reads displayed.
AATCAAATACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCATTTT > USA300TCH1516_ALE/325934‑326113 | aTCAAATACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGaa < 2:5002114/91‑1 (MQ=255) tCAAATACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGaaa > 2:5307932/1‑91 (MQ=255) cAAATACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAg < 1:208244/91‑1 (MQ=255) aaTACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGc > 2:3801569/1‑91 (MQ=255) tACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCaa > 1:837036/1‑91 (MQ=255) aCCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAg < 1:3356968/91‑1 (MQ=255) ccACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGa > 2:2171046/1‑91 (MQ=255) cACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGgaaggtcatct < 2:2604903‑M1/91‑12 (MQ=255) aCTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATg > 2:5766322/1‑91 (MQ=255) aCTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGATTTCATTTAACCACTCCTCCAATGATAATATTGAAAGGCAAGATg > 2:5654625/1‑91 (MQ=255) cTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGa < 1:4445927/91‑1 (MQ=255) cTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGa < 2:2070055/91‑1 (MQ=255) cTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGa > 1:28890/1‑91 (MQ=255) tttttCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGAc > 1:1561409/1‑91 (MQ=255) ttttCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGAcc > 2:4736864/1‑91 (MQ=255) ttttCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGAcc > 1:880602/1‑91 (MQ=255) tttCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCt < 1:1120117/91‑1 (MQ=255) ttCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCtt < 1:3775783/91‑1 (MQ=255) cAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGgaaggtcatcttgcctttc < 1:2547418‑M1/91‑20 (MQ=255) aaTAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCca < 1:1958857‑M2/91‑3 (MQ=255) aaTAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCca > 2:5152566‑M2/1‑89 (MQ=255) aaTAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCca > 1:1218347‑M2/1‑89 (MQ=255) aaTAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATATAACCACACCACCAATGATAAGATTGTAATGTAAGGTGATCTTCca < 1:924183‑M2/91‑3 (MQ=255) aTAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCcaa < 1:5225025‑M2/91‑4 (MQ=255) aaacaaGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCcaatc > 1:130964‑M2/1‑86 (MQ=255) aaaaaGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGgaaggtcatcttgcctttcaatct < 2:4462612‑M1/91‑25 (MQ=255) aaaaGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCcaatctt < 1:5001155‑M2/91‑8 (MQ=255) agagTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAtt < 2:4234836/91‑1 (MQ=255) gagaGGTAGATGCGAAACAAATGTATTATTATCATTTAACCACTCCTCCAATGATAGGATTGAAAGGCGAGATGACCTTCCAATCTTAtct > 2:3940425/1‑89 (MQ=255) gagTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAttt > 2:930152/1‑91 (MQ=255) gagTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAttt < 1:4002355/91‑1 (MQ=255) agTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAtttt > 1:4362300/1‑91 (MQ=255) gTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAttttt > 1:3039414/1‑91 (MQ=255) tGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTta > 2:1290062/1‑91 (MQ=255) ggTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGACAGGCAAGATGACCTTCCAATCTTATTTatat > 1:5433912/1‑91 (MQ=255) ggTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTtat < 1:2424887/91‑1 (MQ=255) ggTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTtat > 1:5076147/1‑91 (MQ=255) gTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTtata > 1:5132357/1‑91 (MQ=255) gATGCGAAACAAATGTATTGTTTTCATTTAATCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATAttt < 1:5454311/91‑1 (MQ=255) gATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGgaaggtcatcttgcctttcaatcttatcattggagga < 1:2829347‑M1/91‑38 (MQ=255) gATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATAttt < 1:4691601/91‑1 (MQ=255) aTGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATAtttt < 2:4327613/91‑1 (MQ=255) aTGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATAtttt < 1:4983055/91‑1 (MQ=255) tGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTa < 1:1008618/91‑1 (MQ=255) gAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGtt > 1:4738430/1‑91 (MQ=255) aaaCAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTa > 1:479416/1‑91 (MQ=255) aaCAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTAt > 2:2035122/1‑91 (MQ=255) aCAACTGTATTGTTTTCATTTAACCACTCCTCCAATGCTAAGATTGAAAGGCAAGCTGACCTTCCAATCTTATTTCTATATTTTAGTTAtt > 2:2261956/1‑91 (MQ=255) aaTGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAg < 2:112433/91‑1 (MQ=255) aaTGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAg < 2:2469135/91‑1 (MQ=255) aaTGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAg < 1:4222973/91‑1 (MQ=255) tGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGAt > 2:689999/1‑91 (MQ=255) tATTGTTTTCATTTAAGCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAGTTTTATATTTTAGTTATTTAGATGc < 2:5568640/91‑1 (MQ=255) tATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGc > 2:1609716/1‑91 (MQ=255) tATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGc < 2:786418/91‑1 (MQ=255) ttGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCt < 2:2762596/91‑1 (MQ=255) ttGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCt < 1:602556/91‑1 (MQ=255) tGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCtt < 1:3241991/91‑1 (MQ=255) gTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCttt < 2:1717178/91‑1 (MQ=255) gTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCttt > 1:686748/1‑91 (MQ=255) gTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGAAAGATGACCTTCCAATCTTATTTTTATATTTTAGTGATTTAGATGCCttt > 1:4866557/1‑91 (MQ=255) tttCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCttttt < 2:3348318/91‑1 (MQ=255) aTTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTaaa > 1:5329699/1‑91 (MQ=255) tttAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTaaaa > 1:1794119/1‑91 (MQ=255) aaCCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTg > 2:3040499/1‑91 (MQ=255) aaCCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTg > 2:3149323/1‑91 (MQ=255) aaCCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTATTTAAAAtgg > 2:4666355/1‑89 (MQ=255) ccACTCCTCCAATTATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGAt < 2:2208941/91‑1 (MQ=255) cctccAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCaaa < 2:2695073/91‑1 (MQ=255) ctccAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAAc < 1:2171046/91‑1 (MQ=255) ctccAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAAc < 2:28890/91‑1 (MQ=255) tccAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACa > 2:5523466/1‑91 (MQ=255) tccAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACa > 2:1015603/1‑91 (MQ=255) tccAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACa > 1:3651091/1‑91 (MQ=255) aaTGATACGATTGAACGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACAttt < 2:4514605/91‑1 (MQ=255) aaTGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACAttt > 1:3441060/1‑91 (MQ=255) aaTGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTAAGATGCCTTTTTTAAAATTGATTCAAACAttt > 1:2377983/1‑91 (MQ=255) tGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTg > 1:225613/1‑91 (MQ=255) gATAAGATTGAAAGGCAAGATGACCTTCcaatcttatcattggaggagtggttaaatgaaaacaatacatttgtttcgcatctaccactct < 2:3841509‑M2/91‑64 (MQ=255) aTAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTgcc < 1:1047785/91‑1 (MQ=255) tAAGATTGAAAGGCAAGATGACCTTCcaatcttatcattggaggagtggttaaatgaaaacaatacatttgtttcgcatctaccactcttt < 1:1676574‑M2/91‑66 (MQ=255) tAAGATTGAAAGGCAAGATGACCTTCcaatcttatcattggaggagtggttaaatgaaaacaatacatttgtttcgcatctaccactcttt < 2:841110‑M2/91‑66 (MQ=255) tAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTgccg > 1:4537986/1‑91 (MQ=255) aaGATTGgaaggtcatcttgcctttcaatcttatcattggaggagtggttaaatgaaaacaatacatttgtttcgcatctaccactctttt > 1:5406143‑M1/1‑7 (MQ=255) aaGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTgccgc < 1:2041763/91‑1 (MQ=255) aaGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTgccgc > 2:5038538/1‑91 (MQ=255) aaGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTgccgc < 2:2402881/91‑1 (MQ=255) aGATTGgaaggtcatcttgcctttcaatcttatcattggaggagtggttaaatgaaaacaatacatttgtttcgcatctaccactcttttt > 1:3138295‑M1/1‑6 (MQ=255) aGATTGgaaggtcatcttgcctttcaatcttatcattggaggagtggttaaatgaaaacaatacatttgtttcgcatctaccactcttttt > 1:1358657‑M1/1‑6 (MQ=255) aGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTgccgcc > 2:4139541/1‑91 (MQ=255) gATTGgaaggtcatcttgcctttcaatcttatcattggaggagtggttaaatgaaaacaatacatttgtttcgcatctaccactctttttt > 1:2977657‑M1/1‑5 (MQ=255) gATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCa > 1:2758181/1‑91 (MQ=255) aTTGgaaggtcatcttgcctttcaatcttatcattggaggagtggttaaatgaaaacaatacatttgtttcgcatctaccactctttttta < 2:3569475‑M1/91‑88 (MQ=255) aTTGgaaggtcatcttgcctttcaatcttatcattggaggagtggttaaatgaaaacaatacatttgtttcgcatctaccactctttttta < 2:631578‑M1/91‑88 (MQ=255) aTTGAAAGGCAAGATGACCTTCcaatcttatcattggaggagtggttaaatgaaaacaatacatttgtttcgcatctaccactctttttta < 2:3268247‑M2/91‑70 (MQ=255) aTTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCa > 2:2148491/1‑75 (MQ=255) aTTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCAt < 1:3885193/91‑1 (MQ=255) ttGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCAtt > 2:5394863/1‑91 (MQ=255) tGgaaggtcatcttgcctttcaatcttatcattggaggagtggttaaatgaaaacaatacatttgtttcgcatctaccactcttttttatt > 2:4292398‑M1/1‑2 (MQ=255) tGgaaggtcatcttgcctttcaatcttatcattggaggagtggttaaatgaaaacaatacatttgtttcgcatctaccactcttttttatt < 2:1420254‑M1/91‑90 (MQ=255) | AATCAAATACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCATTTT > USA300TCH1516_ALE/325934‑326113 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |