| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 891727 | 163 (0.550) | 16 (0.060) | 7/142 | NT | 8.1% | intergenic (+145/‑594) | USA300HOU_RS04385/rnmV_2 | hypothetical protein/Ribonuclease M5 |
| ? | USA300TCH1516_ALE | = 1469857 | 221 (0.840) | coding (97/132 nt) | USA300TCH1516_01369 | hypothetical protein | |||||
Only 100 of 303 total aligned reads displayed.
GGGAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAA > USA300TCH1516_ALE/891637‑891817 | gggAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCT > 1:4663283‑M1/1‑91 (MQ=255)gggAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCT > 1:513845‑M1/1‑91 (MQ=255)gggAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCT > 1:3772073‑M1/1‑91 (MQ=255) gAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTctct < 2:3411527/91‑1 (MQ=33) aGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCtt < 2:353450/91‑1 (MQ=34) aacaaagaagctgacgaaaagtcagcttacaataatgtgcaagttggggatgggccccaacatagagaaattacgGAC‑CCAATttctctat < 1:353490‑M2/16‑3 (MQ=255) gggACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTttgt > 2:4334781/1‑91 (MQ=34) ggACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTttgtt < 1:172604/91‑1 (MQ=34) ggACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTttgtt > 2:3053580/1‑91 (MQ=34) aCATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTgg > 2:2661612/1‑91 (MQ=34) cATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCCACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTggg > 2:1763516/1‑91 (MQ=18) cATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTggg > 1:4215871/1‑91 (MQ=33) aTGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGCCTGTA‑AAATTGCGAAA‑AGAAATTCTacaggcaatgcaagtt < 2:3302560‑M1/91‑17 (MQ=255) aatattTTCGCAAAAATTATTTCGTCGTCACACCCCAACTTGCATTGTCTGTAGAAATT‑GGATTCCCAATTTCTacagaaaatgcaagttg < 2:1550833‑M1/90‑18 (MQ=255) gtcagcttacaataatgtgcaagtttgggatgggccccaacaaagagaaattgggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCAAACt < 2:3131933‑M2/36‑1 (MQ=255) aaaTTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCAt > 2:4408879/1‑91 (MQ=31) aaTTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCAtt < 2:2533027/91‑1 (MQ=32) tttatttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGc > 2:1041213/1‑91 (MQ=34) ttatttCGTCGTCCCACCCCAACTTGCATTGTATGTAGAAATTGGGTTC‑CCAATTTCTacagacaatgcaagttggggtgggacgacgaaa < 2:5353234‑M1/91‑34 (MQ=255) atttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTg < 1:3389755/91‑1 (MQ=38) tttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGt < 1:852791/91‑1 (MQ=39) tcgtcgTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAg < 2:3820055/91‑1 (MQ=255) tcgtcgTCCCACCCCAACTTACATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTacagacaatgtaagttggggtgggacgacgaaataaat > 2:1287456‑M1/1‑53 (MQ=255) gtcgtcCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGaa > 1:698356/1‑91 (MQ=255) tcgtcCCACCCCAACTTGCATTGTCTGTAGATATTGGGAAT‑CCAATTTCTCTTTGTTAGGGCCCATCCCCAACTTGCATTGCCTGTAGAAt > 1:5360213/1‑91 (MQ=255) tcgtcCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAAt > 2:1928442/1‑91 (MQ=255) ccccAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTc > 2:2394182/1‑91 (MQ=255) ccccAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTc > 2:6301/1‑91 (MQ=255) cccAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCg < 1:93741/91‑1 (MQ=255) cccAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCg > 2:401709/1‑91 (MQ=40) cccAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCg < 2:5503174/91‑1 (MQ=255) cccAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCg < 1:1272375/91‑1 (MQ=255) cccAACTTGCATTGTCTGTAGAAATTGGATTC‑CCAATTTCTacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaaata > 2:2356466‑M1/1‑41 (MQ=255) cAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGaa > 1:988788/1‑91 (MQ=255) aaCTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGaaa > 1:2278976/1‑91 (MQ=255) aaCTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGaaa > 1:4451902/1‑91 (MQ=255) aCTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAAt > 2:1661671/1‑91 (MQ=40) cTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAAtt > 1:4566152/1‑91 (MQ=255) cATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAACTTctct > 2:3915299/1‑91 (MQ=255) ttGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCtgt < 2:4505618/91‑1 (MQ=255) ttGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCAGTGCCTGTAGAATTTCTTTTCGAAATTCTAtgt < 1:2504497/91‑1 (MQ=255) tGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCtgtg < 2:5377243/91‑1 (MQ=255) gTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTgtgt < 2:5281411/91‑1 (MQ=255) tCTGTAGAAATTGGGAAT‑CCAATTTCTacagacaatgtaagttggggtgggacgacgaaataaattttgagaaaatatcatttctgtccca > 1:4097196‑M1/1‑27 (MQ=255) cTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTg > 1:2334268/1‑91 (MQ=255) tGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTgg < 1:5009670/91‑1 (MQ=255) tGTAGAAATTGGGAAG‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTgg < 2:5805744/91‑1 (MQ=255) tAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTgggg < 1:2943548/91‑1 (MQ=255) gaaattgggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGcc > 1:2118238‑M2/10‑91 (MQ=255) gaaattgggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTCCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGTcc > 2:2003185‑M2/10‑91 (MQ=255) aaattgggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGccc < 1:1300802‑M2/83‑1 (MQ=255) aaattgggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGccc < 1:5455040‑M2/83‑1 (MQ=255) aaattgggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGccc < 1:1054941‑M2/83‑1 (MQ=255) aattgggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGcccc < 1:1928442‑M2/84‑1 (MQ=255) attgggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCCGTGTTGGGGCCCCt > 1:4261286‑M2/7‑91 (MQ=255) ttgggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTg < 1:3305952‑M2/86‑1 (MQ=255) ttgggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCAGTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTg < 2:5655718‑M2/86‑1 (MQ=255) ttgggAAT‑CCAAGTTCTCTTTGTTGGGACCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTg < 2:3868860‑M2/86‑1 (MQ=255) tgggAAT‑CCAATTTCTCTTTGTTGGAGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCCGTGTTGGGACCCCTGa > 2:5578157‑M2/5‑91 (MQ=255) gggAAT‑CCAATTTCTCTTTGTTGGGGCGCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGAc > 2:1148807‑M2/4‑91 (MQ=255) gggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCtgtg < 2:37640‑M2/74‑1 (MQ=255) gggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGAc > 1:4737794‑M2/4‑91 (MQ=255) ggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTg < 2:4874677‑M2/86‑1 (MQ=255) ggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACt < 1:2721384‑M2/89‑1 (MQ=255) ggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACt > 1:5177547‑M2/3‑91 (MQ=255) ggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACt < 2:246394‑M2/89‑1 (MQ=255) ggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACt < 1:523925‑M2/89‑1 (MQ=255) ggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACt > 1:4923995‑M2/3‑91 (MQ=255) ggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACt > 1:185541‑M2/3‑91 (MQ=255) gAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTa < 1:642725‑M2/90‑1 (MQ=255) aaT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAg > 1:3255997/1‑91 (MQ=255) aT‑CCAATTTCTacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaaatattatttctgtcccactcccttaaaacttat > 2:3239796‑M1/1‑11 (MQ=255) aT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGa > 2:709550/1‑91 (MQ=255) ccAATTTCTacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaaatattatttctgtcccactcccttaaaacttattc > 1:2420019‑M1/1‑9 (MQ=255) ccAATTTCTacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaaatattatttctgtcccactcccttaaaacttattc < 2:1417943‑M1/91‑83 (MQ=255) ccAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAAt < 1:2788021/91‑1 (MQ=255) ccAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAAt < 2:4215871/91‑1 (MQ=40) cAATTTCTacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaaatattatttctgtcccactcccttaaaacttattct < 2:414537‑M1/91‑84 (MQ=255) cAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAAtt > 2:2803888/1‑91 (MQ=255) aaTTTCTacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaaatattatttctgtcccactcccttaaaacttattctt < 1:1463155‑M1/91‑85 (MQ=255) aTTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGa < 1:2020995/91‑1 (MQ=255) aTTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGa > 2:2474399/1‑91 (MQ=255) aTTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGa < 1:3580208/91‑1 (MQ=255) tttCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaa > 1:1659640/1‑91 (MQ=255) tttCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaa > 1:1809401/1‑91 (MQ=255) ttCTacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaaatattatttctgtcccactcccttaaaacttattcttttt > 2:501236‑M1/1‑4 (MQ=255) ttCTacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaaatattatttctgtcccactcccttaaaacttattcttttg > 1:5378141‑M1/1‑4 (MQ=255) ttCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTCTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaaa < 1:4857044/91‑1 (MQ=255) tctcTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaaaa < 2:4752395/91‑1 (MQ=255) tctcTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaaaa < 1:3050447/91‑1 (MQ=255) tCTacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaaatattatttctgtcccactcccttaaaacttattcttttgt > 1:597968‑M1/1‑3 (MQ=255) tCTacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaaatattatttctgtcccactcccttaaaacttattcttttgt > 1:4596639‑M1/1‑3 (MQ=255) tCTacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaaatattatttctgtcccactcccttaaaacttattcttttgt < 2:806663‑M1/91‑89 (MQ=255) cTacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaaatattatttctgtcccactcccttaaaacttattcttttgtg < 1:2915418‑M1/91‑90 (MQ=255) cTacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaaatattatttctgtcccactcccttaaaacttattcttttgtg > 1:3853428‑M1/1‑2 (MQ=255) cTacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaaatattatttctgtcccactcccttaaaacttattcttttgtg > 1:5333066‑M1/1‑2 (MQ=255) tctTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaaaaaa > 2:4449921/1‑91 (MQ=255) tctTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaaaaaa < 2:3265107/91‑1 (MQ=255) tacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaaatattatttctgtcccactcccttaaaacttattcttttgtgt < 2:5217166‑M1/91‑91 (MQ=255) tacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaaatattatttctgtcccactcccttaaaacttattcttttgtgt > 2:4103281‑M1/1‑1 (MQ=255) | GGGAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAA > USA300TCH1516_ALE/891637‑891817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |