| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2088022 = | 203 (0.680) | 14 (0.060) | 7/126 | NT | 7.6% | intergenic (+39/+56) | chp/USA300HOU_RS10560 | Chemotaxis inhibitory protein/Glycyl‑glycine endopeptidase ALE‑1 |
| ? | USA300TCH1516_ALE | 2088070 = | 179 (0.760) | intergenic (+87/+8) | chp/USA300HOU_RS10560 | Chemotaxis inhibitory protein/Glycyl‑glycine endopeptidase ALE‑1 | |||||
Only 100 of 404 total aligned reads displayed.
ATCATCTTATGTAATTAATGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATT > USA300TCH1516_ALE/2087932‑2088111 | acaacgtcgttatatagcgacaggagaggtagacaaggcaggtaatagaataagcagttttggtaagtttagtgcagtttgataattagat < 1:484460‑M1/1‑1 (MQ=255)acaacgtcgttatatagcgacaggagaggtagacaaggcaggtaatagaataagcagttttggtaagtttagtgcagtttgataattagat < 1:4032158‑M1/1‑1 (MQ=255) atcTTATGTAATTAATGGTCCTGGAAAAACTAATGAATATGCATACTACTAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATA < 1:3198924‑M1/91‑1 (MQ=255) atcTTATGTAATTAATGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTACTTTTTTATA > 2:4965572‑M1/1‑91 (MQ=255) tcTTATGTAATTAATGGTCCTGGAAAAACTAATGATTATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATAT > 2:1014788‑M1/1‑91 (MQ=255) tcTTATGTAATTAATGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATAT > 1:569782‑M1/1‑91 (MQ=255) tcTTATGTAATTAATGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATAT > 1:577862‑M1/1‑91 (MQ=255) tcTTATGTAATTAATGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATAT > 2:5729314‑M1/1‑91 (MQ=255) cgtcgttatatagcgacaggagaggtagacaaggcaggtaatagaataagcagttttggtaagtttagtgcagtttgataattagatatat > 1:739357‑M1/87‑91 (MQ=255) cTTATGTAATTAATGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATA > 1:1502746‑M1/1‑91 (MQ=255) tcgttatatagcgacaggagaggtagacaaggcaggtaatagaataagcagttttggtaagtttagtgcagtttgataattagaTATATaa < 2:1519554‑M1/7‑1 (MQ=255) tATGTAATTAATGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAA < 2:1339416‑M1/91‑1 (MQ=255) tATGTAATTAATGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTGACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAA < 2:3460908‑M1/91‑1 (MQ=255) gttatatagcgacaggagaggtagacaagtcaggtaatagaataagcagttttggtaagtttagtgcagtttgataattagaTATATAAAg > 1:5173271‑M1/83‑91 (MQ=255) gttatatagcgacaggagaggtagacaaggcaggtaatagaataagcagttttggtaagtttagtgcagtttgataattagaTATATAAAg < 2:759643‑M1/9‑1 (MQ=255) gttatatagcgacaggagaggtagacaaggcaggtaatagaataagcagttttggtaagtttagtgcagtttgataattagaTATATAAAg < 2:619785‑M1/9‑1 (MQ=255) aTGTAATTAATGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAG > 2:4482929‑M1/1‑91 (MQ=255) aTGTAATTAATGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAG > 2:215330‑M1/1‑91 (MQ=255) gTAATTAATGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGT > 1:619785‑M1/1‑91 (MQ=255) taattaatGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTT < 2:1260334‑M1/91‑1 (MQ=255) atatagcgacaggagaggtagacaaggcaggtaatagaataagcagttttggtaagtttagtgcagtttgataattagaTATATAAAGGtt < 1:3877946‑M1/12‑1 (MQ=255) attaatGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTG < 1:2359589‑M1/91‑1 (MQ=255) taatGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGC > 2:2276113‑M1/1‑91 (MQ=255) taatGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGC < 2:5038131‑M1/91‑1 (MQ=255) agcgacaggagaggtagacaaggcaggtaatagaataagcagttttggtaagtttagtgcagtttgataattagaTATATAAAGGTTTGGc < 1:5313457‑M1/16‑1 (MQ=255) agcgacaggagaggtagacaaggcaggtaatagaataagcagttttggtaagtttagtgcagtttgataattagaTATATAAAGGTTTGGc < 2:3932674‑M1/16‑1 (MQ=255) gcgacaggagaggtagacaaggcaggtaatagaataagcagttttggtaagtttagggcagtttgataattagaTATATAAAGGTTTGGCa > 2:5155699‑M1/75‑91 (MQ=255) aatGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA > 2:5476741‑M1/1‑91 (MQ=255) aatGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA < 2:4310292‑M1/91‑1 (MQ=255) atGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAg > 2:308841/1‑91 (MQ=255) tGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGa > 2:4728268/1‑91 (MQ=255) tGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGAGATTTCTTTTTTAGATAAAGATTTGGCAGa < 1:5383507/91‑1 (MQ=255) ggTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGAc > 1:4260616/1‑91 (MQ=255) ggTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGAc > 1:1602318/1‑91 (MQ=255) gTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACa > 2:5437160/1‑91 (MQ=255) aaaaaCTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATa < 2:2903778/91‑1 (MQ=255) gtagacaaggcaggtaatagaataagcagttttggtaagtttagtgcagtttgataattagaTATATAAAGGTTTGGCAGACATTTCATaa > 2:1698164‑M1/63‑91 (MQ=255) tagacaaggcaggtaatagaataagcagttttggtaagtttagtgcagtttgataattagaTATATAAAGGTTTGGCAGACATTTCATAAc > 1:3306092‑M1/62‑91 (MQ=255) tagacaaggcaggtaatagaataagcagttttggtaagtttagtgcagtttgataattagaTATATAAAGGTTTGGCAGACATTTCATAAc > 1:5328812‑M1/62‑91 (MQ=255) aaaCTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAagttatgaaatgt < 1:2901247‑M1/91‑14 (MQ=255) aaaCTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAAc < 1:1138509/91‑1 (MQ=255) aaaCTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAAc > 1:3074597/1‑91 (MQ=255) aaaCTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAAc < 1:1987923/91‑1 (MQ=255) aaCTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACt > 1:3527398/1‑91 (MQ=255) aaCTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACt > 2:1797538/1‑91 (MQ=255) aCTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTATTTTTTATATAAAGGTTTGGCAGACATTTCATAACTt < 2:3837827‑M2/91‑2 (MQ=255) tAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTtgc > 1:5429420‑M2/1‑88 (MQ=255) aTGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAagttatgaaatgtctgcca < 2:5536800‑M1/91‑20 (MQ=255) aTGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTtgcca > 1:1861614‑M2/1‑86 (MQ=255) aaTATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTtgccaaac < 2:3373621‑M2/91‑9 (MQ=255) tatGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAagttatgaaatgtctgccaaacct < 1:36985‑M1/91‑25 (MQ=255) tatGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAagttatgaaatgtctgccaaacct < 2:5218970‑M1/91‑25 (MQ=255) tGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTtgccaaaccttt < 1:4580968‑M2/91‑13 (MQ=255) tGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTtgccaaaccttt < 1:341116‑M2/91‑13 (MQ=255) tGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTATGGCAGACATTTCATAACTtgccaaaccttt < 2:1078961‑M2/91‑13 (MQ=255) aCTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAagttatgaaatgtctgccaaacctttatata < 1:5608341‑M1/91‑32 (MQ=255) cTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTAGCAGACATTTCATAACTTGCCAAACCTTTatatat > 2:5347466/1‑91 (MQ=255) aTAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTa < 2:1602158/91‑1 (MQ=255) aTAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTa < 1:2587251/91‑1 (MQ=255) tagtagTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTaa > 1:1337781/1‑91 (MQ=255) agtagtTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAAt > 2:2023956/1‑91 (MQ=255) agtagtTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAAt > 1:5219764/1‑91 (MQ=255) gtagtTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAAtt > 1:1823050/1‑91 (MQ=255) gtagtTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAAtt < 1:2136987/91‑1 (MQ=255) tagtTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTa > 2:2348182/1‑91 (MQ=255) agtTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTAt < 2:5318101/91‑1 (MQ=255) agtTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTAt > 1:2702032/1‑91 (MQ=255) agtTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTAt < 2:837760/91‑1 (MQ=255) agtTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTAt > 2:4146324/1‑91 (MQ=255) tACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCaa > 1:556793/1‑91 (MQ=255) aCATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGTGAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCaaa > 2:5687541/1‑91 (MQ=255) cATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAAc < 1:2088375/91‑1 (MQ=255) cATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAAc < 2:4050989/91‑1 (MQ=255) cATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAAc < 2:911698/91‑1 (MQ=255) cATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTCTGGCAGACATTTCACAACTTGCCACACCTGTATATATCTAATTCTCAAAc > 2:4868893/1‑91 (MQ=255) aaTAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAAc < 2:5807801/90‑1 (MQ=255) aaTTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCa < 2:5098694/91‑1 (MQ=255) ttAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACt > 1:4935757/1‑91 (MQ=255) ttAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACt < 1:2778116/91‑1 (MQ=255) aaaaGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTaa > 2:2649985/1‑91 (MQ=255) aaaGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTtgccaaacctttatataaaaaagaaatatctaccttttaa < 2:1430770‑M2/91‑41 (MQ=255) aaaGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTaaa > 1:2197815/1‑91 (MQ=255) aaGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAAc > 2:4396685/1‑91 (MQ=255) aaGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAAc > 2:340229/1‑91 (MQ=255) aGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACt > 1:1277568/1‑91 (MQ=255) gTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTa < 2:3534142/91‑1 (MQ=255) gTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTa < 1:1196986/91‑1 (MQ=255) tAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTAc > 1:2816559/1‑91 (MQ=255) gATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCa > 1:1009667/1‑91 (MQ=255) atatTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCaa < 2:2088164/91‑1 (MQ=255) ttCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACt < 2:2859526/91‑1 (MQ=255) ttCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACt < 1:4379815/91‑1 (MQ=255) tCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAAGTTACCAAAACTg > 2:3743988/1‑91 (MQ=255) tCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTg > 2:2500108/1‑91 (MQ=255) cTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGc < 1:3356562/91‑1 (MQ=255) ttttttATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCt < 1:3460301/91‑1 (MQ=255) ttttATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTa > 1:823420/1‑91 (MQ=255) tttATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTAt < 2:4610649/91‑1 (MQ=255) ttATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTAtt < 1:3789506/91‑1 (MQ=255) ttATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTAtt > 2:3483114/1‑91 (MQ=255) | ATCATCTTATGTAATTAATGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATT > USA300TCH1516_ALE/2087932‑2088111 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |