| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2580557 = | 286 (0.960) | 33 (0.120) | 11/148 | NT | 11.7% | intergenic (+192/‑416) | yveA/pnbA | Aspartate‑proton symporter/Para‑nitrobenzyl esterase |
| ? | USA300TCH1516_ALE | 2580587 = | 232 (0.840) | intergenic (+222/‑386) | yveA/pnbA | Aspartate‑proton symporter/Para‑nitrobenzyl esterase | |||||
Only 100 of 393 total aligned reads displayed.
AAATAACTAACATAACAAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGT > USA300TCH1516_ALE/2580467‑2580647 | agtatttctttatcgtcgtcccaccccaacttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatCg < 2:3176450‑M1/2‑1 (MQ=255) aataaCTAACATAACAAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACg < 1:4991784/91‑1 (MQ=255) aataaCTAACATAACAAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACg < 2:2331525/91‑1 (MQ=255) ataaCTAACATAACAAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGa > 1:1017354/1‑91 (MQ=255) tatttctttatcgtcgtcccaccccaacttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatCGaa < 1:1367872‑M1/4‑1 (MQ=255) tatttctttatcgtcgtcccaccccaacttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatCGaa < 2:1228084‑M1/4‑1 (MQ=255) tatttctttatcgtcgtcccaccccaacttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatCGaa > 1:1589028‑M1/88‑91 (MQ=255) tatttctttatcgtcgtcccaccccaacttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatCGaa > 2:5334341‑M1/88‑91 (MQ=255) atttctttatcgtcgtcccaccccaacttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatCGaaa < 1:4791760‑M1/5‑1 (MQ=255) atttctttatcctcgtcccaccccaacttgcattgcctgtagaatttctcttcgaaattctctgtgttggggaccctgagtagaatCGaaa < 2:5835068‑M1/5‑1 (MQ=255) aactaacATAACAAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCCGTAGTTGACTGAACGaaa > 1:5079886/1‑91 (MQ=255) aactaacATAACAAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGaaa > 1:5757609/1‑91 (MQ=255) actaacATAACAAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGaaaa > 2:451985/1‑91 (MQ=255) actaacATAACAAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGaaaa < 1:334383/91‑1 (MQ=255) actaacATAACAAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGaaaa < 2:765158/91‑1 (MQ=255) taacataacaAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATg > 2:5595845/1‑91 (MQ=255) taacataacaAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATg > 1:5675702/1‑91 (MQ=255) aacataacaAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATgc < 2:1394744/91‑1 (MQ=255) aacataacaAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATgc > 2:1010720/1‑91 (MQ=255) ataacaAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCt > 1:2415421/1‑91 (MQ=255) ataacaAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCt < 2:1924765/91‑1 (MQ=255) aGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAAc > 1:839076/1‑91 (MQ=255) aGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAAc < 2:1812814/91‑1 (MQ=255) gatgatgatCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACa < 1:2975373/91‑1 (MQ=40) gatgatgatCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACa < 1:250987/91‑1 (MQ=39) atgatgatCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACaa < 2:2827390/91‑1 (MQ=38) tgatgatCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAg > 2:1491088/1‑91 (MQ=38) tgatgatCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAg > 2:833342/1‑91 (MQ=37) tgatgatCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAg < 1:3677809/91‑1 (MQ=38) ccaccccaacttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatCGAAAATGCGCTTGTAACAAGc > 1:2712897‑M1/70‑91 (MQ=255) caccccaacttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatCGAAAATGCGCTTGTAACAAGCt > 2:4573692‑M1/69‑91 (MQ=255) atgatCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCt < 1:918723/91‑1 (MQ=34) atgatCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAAAGAAAATGCGCTTGTAACAAGCt < 2:3459143/91‑1 (MQ=25) tgatCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCtt < 1:1874272/91‑1 (MQ=34) gatCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCttt < 2:4171358/91‑1 (MQ=33) tCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCttttt < 2:5047311/91‑1 (MQ=31) tCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCttttt < 2:1597862/91‑1 (MQ=31) tCAGGCTGGGACATAAATAAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCttttt < 1:4186593/91‑1 (MQ=14) ccccaacttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactgaaCGAAAATGCGCTTGTAACAAGCttttt > 1:4321176‑M1/65‑91 (MQ=255) cgacttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatCGAAAATGCGCTTGTAACAAGCtttttt > 2:1735271‑M1/64‑91 (MQ=255) caactcgcattgcctgtagaatttcttttcgaaattctctatgttggggcccctgactagaatTGAAAATGCGCTTGTAACAAGCtttttt > 1:2447886‑M1/64‑91 (MQ=255) ggCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCg < 2:3127245/91‑1 (MQ=31) ggCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCg < 2:3014091/91‑1 (MQ=31) cTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGAt < 2:2173259/91‑1 (MQ=33) acttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactgaaCGAAAATGCGCTTGTAACAAGCTTTTTTCGAt > 1:346493‑M1/60‑91 (MQ=255) cttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactgaaCGAAAATGCGCTTGTAACAAGCTTttttcaatt > 2:5377495‑M1/59‑87 (MQ=255) gggACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTc > 1:2328303/1‑91 (MQ=34) gggACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTc > 2:325428/1‑91 (MQ=34) ggACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCt > 1:3793818/1‑91 (MQ=34) gACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTa > 2:2244359/1‑91 (MQ=33) tAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCa > 2:4632946/1‑91 (MQ=33) tAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCa > 2:5555746/1‑91 (MQ=33) ctgtagaatttcttttcgaaattctctgtgttggggcccctgactagagtTGAAAATGCGCTTGCAACAAGCTTTTTTCAACTCTAGTCAg > 2:3387726‑M1/51‑91 (MQ=255) aTCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAggg > 1:4727266/1‑91 (MQ=34) cAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGc > 2:3638324/1‑91 (MQ=34) cAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGc < 1:2640949/91‑1 (MQ=34) cAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGc > 2:249305/1‑91 (MQ=34) aTGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGccc < 1:1791624/91‑1 (MQ=34) ttCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCaa > 1:1471602/1‑91 (MQ=34) tCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTGTTCGATTCTAGTCAGGGGCCCCAac > 2:5442674/1‑91 (MQ=21) cTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAaca > 2:4262937/1‑91 (MQ=34) tATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAacac < 1:5271177/91‑1 (MQ=34) tGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACag < 1:3660395/91‑1 (MQ=34) gCTCTACGAAGTGATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACaga < 2:3726571/91‑1 (MQ=21) ctctACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACagag < 1:4075833/91‑1 (MQ=34) tctACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAgaga < 1:3628428/91‑1 (MQ=34) tctACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAgaga > 1:5481863/1‑91 (MQ=34) ctACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGaa > 2:706596/1‑91 (MQ=34) aCGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAAtt > 2:1046428/1‑91 (MQ=33) aGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGa > 2:5708909/1‑91 (MQ=34) aGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGa < 1:2258277/91‑1 (MQ=34) aGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGa > 2:1130970/1‑91 (MQ=33) gTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGaa > 1:1965726/1‑91 (MQ=34) gTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGaa < 1:454439/91‑1 (MQ=34) atatTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAg > 2:4112341/1‑91 (MQ=34) atatTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAg < 1:2146994/91‑1 (MQ=34) tatTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTGTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGa < 1:4565420/91‑1 (MQ=21) atTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGaa < 2:3054867/91‑1 (MQ=33) atTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGaa > 1:3141661/1‑91 (MQ=33) ttGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGaaa > 2:2600100/1‑91 (MQ=34) ttGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGaaa < 2:4445853/91‑1 (MQ=34) ttGGCAGTAGTTGACTGAACGAAAATGCGCATGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGaaa < 1:4515659/91‑1 (MQ=21) cAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCt < 1:2797452/91‑1 (MQ=34) cAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCt > 1:2840543/1‑91 (MQ=34) gtagtTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTAc > 1:1646621/1‑91 (MQ=34) gtagtTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTAc > 1:1114793/1‑91 (MQ=34) gtagtTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTAc > 2:4693973/1‑91 (MQ=34) gtTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAgg > 2:5209369/1‑91 (MQ=33) gtTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAgg > 1:4468797/1‑91 (MQ=34) gACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCaa > 1:3093943/1‑91 (MQ=33) gACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCaa < 1:3310696/91‑1 (MQ=34) aCTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAAt > 1:2204533/1‑91 (MQ=34) cTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATg < 1:788798/91‑1 (MQ=34) gAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCa > 2:40438/1‑91 (MQ=34) aaCGAAGATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCaa < 1:3198135/91‑1 (MQ=21) aaCGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACCCAGAGAATTTCGCAAAGAAATTCTACAGGCCATGCaa > 2:3922309/1‑91 (MQ=255) aCGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAg < 2:483942/91‑1 (MQ=34) aCGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAg > 1:1539306/1‑91 (MQ=34) CGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGt < 1:618908‑M1/91‑1 (MQ=255) CGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGt > 1:3970790‑M1/1‑91 (MQ=255) | AAATAACTAACATAACAAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGT > USA300TCH1516_ALE/2580467‑2580647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |