| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2797807 = | 284 (0.950) | 14 (0.050) | 9/142 | NT | 5.2% | intergenic (+95/+172) | USA300HOU_RS14370/USA300HOU_RS14375 | N‑acetylmuramoyl‑L‑alanine amidase domain‑containing protein/N‑carbamoylsarcosine amidase |
| ? | USA300TCH1516_ALE | 2797838 = | 256 (0.970) | intergenic (+126/+141) | USA300HOU_RS14370/USA300HOU_RS14375 | N‑acetylmuramoyl‑L‑alanine amidase domain‑containing protein/N‑carbamoylsarcosine amidase | |||||
Only 100 of 472 total aligned reads displayed.
TATATTAAACCCGTAAAATTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTG > USA300TCH1516_ALE/2797717‑2797897 | tgctcatatttataaaatgtgtgagatggcaattgaaacggatatgatgaggaacatttgaacataaaataatatatttatataaaacgAc > 2:501315‑M1/90‑91 (MQ=255) atatTAAACCCGTAAAATTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAAC > 1:474254‑M1/1‑91 (MQ=255) atatTAAACCCGTAAAATTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAAC > 1:697886‑M1/1‑91 (MQ=255) tatTAAACCCGTAAAATTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACC < 1:3716079‑M1/91‑1 (MQ=255) atTAAACCCGTAAAATTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCC < 2:5257961‑M1/91‑1 (MQ=255) atatttataaaatgtgtgagatggcaattgaaacggatatgatgaggaacatttgaacataaaataatatatttatataaaacgACCCGAg > 1:4125877‑M1/85‑91 (MQ=255) atatttataaaatgtgtgagatggcaattgaaacggatatgatgaggaacatttgaacataaaataatatatttatataaaacgACCCGAg > 1:847999‑M1/85‑91 (MQ=255) atatttataaaatgcgtgagatggcaattgaaacggatttgatgaggaacatttgaacataaaataatatatttatataaaacgACCCGAg > 1:4863707‑M1/85‑91 (MQ=255) aaaCCCGTAAAATTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCATTTAAACCCGAG > 2:5868511‑M1/1‑91 (MQ=255) aaaCCCGTAAAATTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAG > 2:1784965‑M1/1‑91 (MQ=255) aaaCCCGTAAAATTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAG > 2:1928074‑M1/1‑91 (MQ=255) aaaCCCGTAAAATTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAG > 1:24821‑M1/1‑91 (MQ=255) aaaCCCGTAAAATTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAG < 1:3626755‑M1/91‑1 (MQ=255) tatttataaaatgtgtgagatggcaattgaaacggatatgatgaggaacatttgaacataaaataatatatttatataaaacgACCCGAgg > 2:4237709‑M1/84‑91 (MQ=255) tatttataaaatgtgtgagatggcaattgaaacggatatgatgaggaacatttgaacataaaataatatatttatataaaacgACCCGAgg < 1:4273964‑M1/8‑1 (MQ=255) aaCCCGTAAAATTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGG < 2:1469987‑M1/91‑1 (MQ=255) aCCCGTAAAATTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGC > 2:4465947‑M1/1‑91 (MQ=255) ccGTAAAATTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCAt > 2:840807/1‑91 (MQ=255) cGTAAAATTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCAtt > 1:1505102/1‑91 (MQ=255) tAAAATTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCa > 2:2413596/1‑91 (MQ=255) aaaaTTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAg > 2:1399803/1‑91 (MQ=255) aaaTTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGt > 2:2258960/1‑91 (MQ=255) aaTTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGtt > 2:5087179/1‑91 (MQ=255) aaTTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGtt > 1:2083434/1‑91 (MQ=255) atgtgtgagatggcaattgaaacggatatgatgaggaacatttgaacataaaataatatatttatataaaacgACCCGAGGCATTCAGTTc > 2:4706633‑M1/74‑91 (MQ=255) aTTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTc > 2:2333623/1‑91 (MQ=255) tttATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCgttcgaactg < 1:5017298‑M1/91‑11 (MQ=255) tttATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCg < 1:4399769/91‑1 (MQ=255) tttATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCg < 2:5061178/91‑1 (MQ=255) tttATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCg < 1:2125343/91‑1 (MQ=255) ttATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGa > 1:1739300/1‑91 (MQ=255) tataAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGaa < 1:4558857/91‑1 (MQ=255) tataAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGaa > 2:5353900/1‑91 (MQ=255) ttaAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAAc < 2:459291/90‑1 (MQ=255) ataAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTGCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAAc > 2:3951974/1‑91 (MQ=255) aGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACgcc < 1:972115‑M2/91‑4 (MQ=255) aGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACgcc > 1:1007998‑M2/1‑88 (MQ=255) gTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACgcct > 1:5151928‑M2/1‑87 (MQ=255) tataAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACgcctc > 2:3022553‑M2/1‑86 (MQ=255) tataAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACgcctc < 1:5495590‑M2/91‑6 (MQ=255) ataAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACgcctcg < 2:2811823‑M2/91‑7 (MQ=255) ataAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACgcctcg > 1:2834134‑M2/1‑85 (MQ=255) ataAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACgcctcg > 1:3234104‑M2/1‑85 (MQ=255) ataAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATCAAACCCGAGGCATTCAGTTCGAACgcctcg > 1:4948088‑M2/1‑85 (MQ=255) taAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACgcctcgg > 1:3566125‑M2/1‑84 (MQ=255) ggcaattgaaacggatatcatgaggaacatttgaacataaaataatatatttatataaaacgACCCGAGGCATTCAGTTCGAACGCCTCgg > 1:5761700‑M1/63‑91 (MQ=255) aaaCAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATGTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACgcctcggg > 2:4860390‑M2/1‑83 (MQ=255) cAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCgttcgaactgaatgcctcgggttt < 1:1309357‑M1/91‑25 (MQ=255) aaGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGt < 2:5647782/91‑1 (MQ=255) aaGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGt < 2:3603517/91‑1 (MQ=255) aaGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGt < 1:3283289/91‑1 (MQ=255) aGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGtt > 2:3542029/1‑91 (MQ=255) ggAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGttt < 1:4186120/91‑1 (MQ=255) gTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTtat < 1:4330969/91‑1 (MQ=255) gTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTtat > 2:2584506/1‑91 (MQ=255) tCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTtatat > 2:1320226/1‑91 (MQ=255) tCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTtatat > 2:315460/1‑91 (MQ=255) cGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTtatata > 2:2140990/1‑91 (MQ=255) cTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAata > 2:1698809/1‑91 (MQ=255) cTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAata < 2:3103755/91‑1 (MQ=255) ttAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAatat < 2:5545721/91‑1 (MQ=255) ttAAACATATGTCTGTTCATCAGTCTGATTTCTTATTCAATTAAACCCGGGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAatat < 1:2413596/91‑1 (MQ=255) tAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAatata < 2:4079590/91‑1 (MQ=255) aaaCATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAatatat > 1:3071397/1‑91 (MQ=255) aaaCATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAatatat < 1:5331545/91‑1 (MQ=255) tatTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTAttt > 1:1064500/1‑91 (MQ=255) ttCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTAt < 1:5406397/91‑1 (MQ=255) tCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATg < 1:1646981/91‑1 (MQ=255) tCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATg > 1:2347352/1‑91 (MQ=255) tGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGtt < 2:1123777/91‑1 (MQ=255) tGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGtt > 1:2187145/1‑91 (MQ=255) tGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGtt < 2:5801958/91‑1 (MQ=255) tGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGtt < 1:4023865/91‑1 (MQ=255) ttCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCa < 2:4971523/91‑1 (MQ=255) tCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCaa < 2:2733951/91‑1 (MQ=255) tCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCaa < 1:1995300/91‑1 (MQ=255) cATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCaaa < 1:179019/91‑1 (MQ=255) tAAGTCTGATTTCTTATTCAATTAAACCCGCGGCCTTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAGTg > 2:5179399/1‑91 (MQ=255) aaGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGt < 2:334493/91‑1 (MQ=255) aGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGtt > 2:3467916/1‑91 (MQ=255) gTCTGATTTCTTTTTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTc < 2:3753472/91‑1 (MQ=255) tCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTc < 1:2903415/90‑1 (MQ=255) tGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCtc < 1:3637708/91‑1 (MQ=255) tttCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCtcatc < 2:638249/91‑1 (MQ=255) tttCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCtcatc > 1:3444267/1‑91 (MQ=255) tCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTcatcat < 2:3867081/91‑1 (MQ=255) aTTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATcc < 1:3917032/91‑1 (MQ=255) aTTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATcc < 1:5233090/91‑1 (MQ=255) tCAATTAACCCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGt > 1:4216505/1‑91 (MQ=255) tCAATTAAACCCGCGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGt < 1:4459653/91‑1 (MQ=255) cAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGtt < 1:586466/91‑1 (MQ=255) cAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGtt > 1:2269742/1‑91 (MQ=255) aTTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTc < 1:5646425/91‑1 (MQ=255) tAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCaa > 2:4187217/1‑91 (MQ=255) tAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCaa < 2:1857964/91‑1 (MQ=255) aaaCCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAAt < 2:1178015/91‑1 (MQ=255) aaCCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAAtt > 1:118903/1‑91 (MQ=255) aaCCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAAtt < 1:2708083/91‑1 (MQ=255) aCCCGAGGCgttcgaactgaatgcctcgggtttaattgaataagaaatcagacttatgaacagaaatatgtttaagtccgaactccttgtt > 1:1419182‑M1/1‑9 (MQ=255) aCCCGAGGCgttcgaactgaatgcctcgggtttaattgaataagaaatcagacttatgaacagaaatatgtttaagtccgaactccttgtt > 2:2905292‑M1/1‑9 (MQ=255) | TATATTAAACCCGTAAAATTTATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTCGAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTG > USA300TCH1516_ALE/2797717‑2797897 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |