| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 234750 | 270 (0.900) | 16 (0.060) | 14/140 | NT | 6.0% | intergenic (+48/+217) | USA300HOU_RS01045/gsiA | hypothetical protein/Glutathione import ATP‑binding protein GsiA |
| ? | USA300TCH1516_ALE | = 234763 | 262 (1.000) | intergenic (+61/+204) | USA300HOU_RS01045/gsiA | hypothetical protein/Glutathione import ATP‑binding protein GsiA | |||||
Only 100 of 347 total aligned reads displayed.
GTTAAATATACATTGACTAAGCTAAGTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCTAAAACTTGATATGGTGCCGA > USA300TCH1516_ALE/234673‑234853 | gTTAAATATACATTGACTAAGCTAAGTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTg < 1:531162/91‑1 (MQ=255) aaaTATACATTGACTAAGCTAAGTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGgcg < 2:4718389‑M2/91‑4 (MQ=255) aaaTATACATTGACTAAGCTAAGTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGgcg < 2:727071‑M2/91‑4 (MQ=255) atatACATTGAGTAAGCTAAGTTGACACACTCAAAAATCTGAATATTCTCATAAAATATCAATAATCCACCGCACTTCAGATAGTGgcggg < 2:5835332‑M2/91‑6 (MQ=255) atatACATTGACTAAGCTAAGTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGgcggg < 1:5360717‑M2/91‑6 (MQ=255) tataCATTGACTAAGCTAAGTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGgcgggg > 2:1115270‑M2/1‑85 (MQ=255) ataCATTGACTAAGCTAAGTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGgcggggg > 1:3247219‑M2/1‑84 (MQ=255) ataCATTGACTAAGCTAAGTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGgcggggg < 2:1685505‑M2/91‑8 (MQ=255) ataCATTGACTAAGCTAAGTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGgcggggg < 2:433285‑M2/91‑8 (MQ=255) taCATTGACTAAGCTAAGTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGgcggggga < 1:4050811‑M2/91‑9 (MQ=255) taCATTGACTAAGCTAAGTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGgcggggga > 2:349409‑M2/1‑83 (MQ=255) aCATTGACTAAGCTAAGTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGgcgggggat > 2:4008343‑M2/1‑82 (MQ=255) aCATTGACTAAGCTAAGTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGgcgggggat > 2:3639126‑M2/1‑82 (MQ=255) cATTGACTAAGCTAAGTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGgcgggggatt < 2:3819409‑M2/91‑11 (MQ=255) cATTGACTAAGCTAAGTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGgcgggggatt > 2:3389647‑M2/1‑81 (MQ=255) ttGACTAAGCTAAGTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTa > 2:3795847/1‑91 (MQ=255) aCTAAGCTAAGTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTc > 1:4421222/1‑91 (MQ=255) ctaagctaagTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCt < 2:2610247/91‑1 (MQ=255) aagctaagTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTgg < 1:3361279/91‑1 (MQ=255) agctaagTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGc < 2:4097624/91‑1 (MQ=255) gctaagTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCg > 1:3411509/1‑91 (MQ=255) gctaagTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCg > 2:2074076/1‑91 (MQ=255) gctaagTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCg < 1:615693/91‑1 (MQ=255) ctaagTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGt < 1:3053672/91‑1 (MQ=255) taagTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGtt < 1:3874303/91‑1 (MQ=255) aagTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTa < 1:1434406/91‑1 (MQ=255) gTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTaaa > 2:4842377/1‑91 (MQ=255) tGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAAt > 1:2625128/1‑91 (MQ=255) tGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAAt < 2:628914/91‑1 (MQ=255) gACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATg > 2:2241604/1‑91 (MQ=255) cacacTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGcc > 1:5409135/1‑91 (MQ=255) tCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAg < 1:3218355/91‑1 (MQ=255) aaaaaTCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTa < 1:3547260/91‑1 (MQ=255) aaaaaTCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTa > 2:4192162/1‑91 (MQ=255) aaaaTCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGCTAAAATGCCCAAAGTAt > 2:4643066/1‑91 (MQ=255) aaaTCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATg < 1:1262506/91‑1 (MQ=255) aaTCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATgg > 1:1238584/1‑91 (MQ=255) aTCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATggg < 1:727071/91‑1 (MQ=255) aTCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATggg < 1:2994696/91‑1 (MQ=255) tCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATgggg > 1:2840475/1‑91 (MQ=255) tCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATgggg > 1:1390786/1‑91 (MQ=255) tGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATgggggg > 1:1733561/1‑90 (MQ=255) tGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGt > 1:4934171/1‑91 (MQ=255) aaTATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGTGGATTTATTACTGCGTTAAAACGCCCAAAGTATGGGGGTGa > 2:5791558/1‑91 (MQ=255) aaTATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGCTAAAATGCCCAAAGTATGGGGGTGa > 2:3065919/1‑91 (MQ=255) tatTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGAct > 2:5509043/1‑91 (MQ=255) atTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGActc < 1:1694121/91‑1 (MQ=255) atTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGActc < 1:422145/91‑1 (MQ=255) cTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTa < 2:2468700/91‑1 (MQ=255) taataaAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTaa > 1:2761716/1‑91 (MQ=255) ataaAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAAt > 1:5087936/1‑91 (MQ=255) ataaAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAAt > 2:3326164/1‑91 (MQ=255) ataaAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAAt < 2:1606834/91‑1 (MQ=255) taaAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATc < 2:5042880/91‑1 (MQ=255) aaaTATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCAt > 1:2500252/1‑91 (MQ=255) aaTATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATg < 2:4946437/91‑1 (MQ=255) aaTATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATg < 1:4678943/91‑1 (MQ=255) atatAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATgg < 2:144281/91‑1 (MQ=255) ataaataaTCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCa > 1:2874063/1‑91 (MQ=255) aataatCCCCCGCACTTCACATAGTGgcgggggattatttatattttattagaatattcagatttttgagtgtgtcaacttagcttagtca < 1:3715234‑M2/91‑66 (MQ=255) aataatCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAg > 1:4300744/1‑91 (MQ=255) aataatCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAg > 1:5606761/1‑91 (MQ=255) aataatCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGCATGGGGGTGACTCTTAAATCATGGCAAAg > 1:5028621/1‑91 (MQ=255) ataatCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGc < 1:2933234/91‑1 (MQ=255) ataatCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGc < 1:3170247/91‑1 (MQ=255) taatCCCCCGCACTTAACATAGTGGCGGGGGATTTATTCTGGAGATAAAAAGCACAAAGTATGGAGGTGACTCATAAATAATGGCAAAgaa > 2:1088811/1‑89 (MQ=255) aatCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCAc < 1:109036/91‑1 (MQ=255) aatCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCAc > 2:1488332/1‑91 (MQ=255) aatCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCAc > 1:1963995/1‑91 (MQ=255) atCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCAcc < 1:3291492/91‑1 (MQ=255) atCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCAcc < 1:2689815/91‑1 (MQ=255) atCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCAcc < 1:1662076/91‑1 (MQ=255) tCCCCCGTACTTCACTTAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCt < 2:4519587/91‑1 (MQ=255) tCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCt < 2:203278/91‑1 (MQ=255) tCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCt < 1:3795847/91‑1 (MQ=255) tCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCt < 1:3905939/91‑1 (MQ=255) tCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCt < 1:1615761/91‑1 (MQ=255) tCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCt < 1:1490364/91‑1 (MQ=255) cccGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCTaaa < 1:2074076/91‑1 (MQ=255) ccGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTACAATGCCCAAAGTATTGGGGTGACTCTTAAATCATGGCAAAGCACCTaaaa > 2:2552620/1‑91 (MQ=255) gCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCTAAAACt > 2:5236824/1‑91 (MQ=255) cACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCTAAAACtt < 2:1954031/91‑1 (MQ=255) cACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCTAAAACtt < 2:514559/91‑1 (MQ=255) cTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCTAAAACTTGa < 2:775231/91‑1 (MQ=255) tCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCTAAAACTTGata < 1:5637564/91‑1 (MQ=255) cacaTAGTGgcgggggattatttatattttattagaatattcagatttttgagtgtgtcaacttagcttagtcaatgtatatttaacgtca < 2:2963669‑M2/91‑83 (MQ=255) cacaTAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCTAAAACTTGatat < 1:5236824/91‑1 (MQ=255) cacaTAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCTAAAACTTGatat < 1:4819379/91‑1 (MQ=255) cacaTAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCTAAAACTTGatat > 1:2150230/1‑91 (MQ=255) cacaTAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGGGACTCTTAAATCATGGCAAAGCACCTAAAACTTGatat > 1:566974/1‑91 (MQ=255) acaTAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCCTGGCAAAGCACCTAAAACTTGATATg > 2:5350226/1‑91 (MQ=255) caTAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCTAAAACTTGATATgg < 2:1229459/91‑1 (MQ=255) caTAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCTAAAACTTGATATgg > 1:4165598/1‑91 (MQ=255) gTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCTAAAACTTGATATGGTGcc > 2:2358340/1‑91 (MQ=255) gTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCTAAAACTTGATATGGTGcc > 2:1916586/1‑91 (MQ=255) gTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCTAAAACTTGATATGGTGcc < 1:2409613/91‑1 (MQ=255) tGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCTAAAACTTGATATGGTGCCg > 2:5013276/1‑91 (MQ=255) tGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCTAAAACTTGATATGGTGCCg > 1:4550076/1‑91 (MQ=255) ggCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCTAAAACTTGATATGGTGCCGa > 2:1201835/1‑91 (MQ=255) ggCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCTAAAACTTGATATGGTGCCGa > 2:699863/1‑91 (MQ=255) | GTTAAATATACATTGACTAAGCTAAGTTGACACACTCAAAAATCTGAATATTCTAATAAAATATAAATAATCCCCCGCACTTCACATAGTGGCGGGGGATTTATTCTGGCGTTAAAATGCCCAAAGTATGGGGGTGACTCTTAAATCATGGCAAAGCACCTAAAACTTGATATGGTGCCGA > USA300TCH1516_ALE/234673‑234853 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |