| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2088038 | 200 (0.670) | 13 (0.060) | 11/126 | NT | 7.2% | intergenic (+55/+40) | chp/USA300HOU_RS10560 | Chemotaxis inhibitory protein/Glycyl‑glycine endopeptidase ALE‑1 |
| ? | USA300TCH1516_ALE | = 2088052 | 179 (0.760) | intergenic (+69/+26) | chp/USA300HOU_RS10560 | Chemotaxis inhibitory protein/Glycyl‑glycine endopeptidase ALE‑1 | |||||
Only 100 of 354 total aligned reads displayed.
AACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCG > USA300TCH1516_ALE/2087962‑2088142 | agacaaggcaggtaatagaataagcagttttggtaagtttagtgcagtttgataattagaTATATAAAGGTTTGGCAGACATTTCATAACt > 2:3860317‑M1/61‑91 (MQ=255)aaCTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACt < 2:4095745/91‑1 (MQ=255)aaCTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACt > 1:1883502/1‑91 (MQ=255) tAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTtgc > 2:4980463‑M2/1‑88 (MQ=255) tAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTtgc < 1:2208681‑M2/91‑4 (MQ=255) tAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTtgc > 1:2370513‑M2/1‑88 (MQ=255) aaTGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTATGGCAGACATTTCATAACTtgcc < 1:2481873‑M2/91‑5 (MQ=255) aTGAATATGCATACTAATAGTAGTTACATCAATTAAAAGGTAGATATTTCTTTTTTATATAACGGTTTGGCAGACATTTCATAACTtgcca < 1:2706454‑M2/91‑6 (MQ=255) aTGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTtgcca < 1:1282893‑M2/91‑6 (MQ=255) aTGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTtgcca > 1:2059874‑M2/1‑86 (MQ=255) tGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTtgccaa > 2:2193037‑M2/1‑85 (MQ=255) ggcaggtaatagaataagcagttttggtaagtttagtgcagtttgataattagaTATATAAAGGTTTGGCAGACATTTCATAACTTGCCaa > 1:5395986‑M1/55‑91 (MQ=255) gAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTtgccaaa > 2:2332239‑M2/1‑84 (MQ=255) aaTATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTtgccaaac < 2:3373844‑M2/91‑9 (MQ=255) atGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTtgccaaacctt > 1:1824987‑M2/1‑80 (MQ=255) tGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTtgccaaaccttt < 1:4580968‑M2/91‑13 (MQ=255) gCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTATTATATAAAGGTTTGGCAGACATTTCATAACTtgccaaaccttta > 1:4411580‑M2/1‑78 (MQ=255) tACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTtgccaaacctttatat < 2:1086660‑M2/91‑17 (MQ=255) aTAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCATACATTTCATAACTTGCCAAACCTTTATATATCTa < 2:3472520/91‑1 (MQ=255) aTAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTa < 1:3090116/91‑1 (MQ=255) agtagtTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAAt > 2:2023956/1‑91 (MQ=255) agtagtTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAAt > 1:3508583/1‑91 (MQ=255) gtagtTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAAtt > 1:4332938/1‑91 (MQ=255) ttACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCa > 1:5412986/1‑91 (MQ=255) aCATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGTGAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCaaa > 2:5687541/1‑91 (MQ=255) ggtaagtttagtgcagtttgataattagaTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAAc > 1:1147893‑M1/30‑91 (MQ=255) cATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAAc > 2:1790178/1‑91 (MQ=255) aaTAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAAc < 2:5807801/90‑1 (MQ=255) tAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTg < 1:546098/91‑1 (MQ=255) tAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTg > 2:4890683/1‑91 (MQ=255) ttAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACt > 1:4935757/1‑91 (MQ=255) ttAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACt < 1:2778116/91‑1 (MQ=255) aaaGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTaaa > 2:1044201/1‑91 (MQ=255) aGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACt < 1:2165934/91‑1 (MQ=255) aGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACt < 1:4146324/91‑1 (MQ=255) ggTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACtt > 1:2631286/1‑91 (MQ=255) gTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTa < 2:3534142/91‑1 (MQ=255) gTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTa < 2:5459192/91‑1 (MQ=255) tAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTAc > 1:3318312/1‑91 (MQ=255) tAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTAc < 1:525010/91‑1 (MQ=255) aGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTAcc > 2:4724062/1‑91 (MQ=255) gATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCa > 2:4433715/1‑91 (MQ=255) gATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCa > 1:1009667/1‑91 (MQ=255) atatTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCaa > 1:2106379/1‑91 (MQ=255) atatTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCaa < 2:2088164/91‑1 (MQ=255) tatTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCaaa > 1:5199289/1‑91 (MQ=255) tatTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCaaa > 2:504915/1‑91 (MQ=255) atTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCaaaa < 1:3746247/91‑1 (MQ=255) tttCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAAc < 1:5322888/91‑1 (MQ=255) ttCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACt < 2:4260616/91‑1 (MQ=255) cTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGc < 1:360967/91‑1 (MQ=255) cTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGc > 2:902789/1‑91 (MQ=255) ttttttATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCt < 1:3460301/91‑1 (MQ=255) ttttttATAGAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCTACCTGCACTAAACTTTCCTAATCTGcg < 2:2988669/91‑2 (MQ=255) ttttATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTa > 1:823420/1‑91 (MQ=255) tttATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTAt < 2:5323919/91‑1 (MQ=255) ttATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTAtt < 1:3789506/91‑1 (MQ=255) tatataAAGGTTTGGCAGACATTTCATAACTtgccaaacctttatataaaaaagaaatatctaccttttaatttatgtaactactattagt < 1:5608262‑M2/91‑61 (MQ=255) ATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAGCTGCTTATTCt > 1:1642353‑M1/1‑91 (MQ=255) ATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCt < 2:2891822‑M1/91‑1 (MQ=255) ATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCt > 1:1543538‑M1/1‑91 (MQ=255) ATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATAAATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCt > 1:713988‑M1/1‑91 (MQ=255) TATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTa < 2:1545476‑M1/91‑1 (MQ=255) TATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTa > 1:3370710‑M1/1‑91 (MQ=255) TATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTa < 1:1426832‑M1/91‑1 (MQ=255) ATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTAt > 2:2781451‑M1/1‑91 (MQ=255) TAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTAtt > 2:1201736‑M1/1‑91 (MQ=255) TAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAACTATCAAACTGCACTAAACTTACCAAAACTCCTTATTCTAtt < 2:5840365‑M1/91‑1 (MQ=255) aaaGGTTTGGCAGACATTTCATAACTtgccaaacctttatataaaaaagaaatatctaccttttaatttatgtaactactattagtatgca < 2:3415577‑M2/91‑66 (MQ=255) AAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTa < 1:2931018‑M1/91‑1 (MQ=255) AAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTAc > 2:1682357‑M1/1‑91 (MQ=255) aGGTTTGGCAGACATTTCATAACTtgccaaacctttatataaaaaagaaatatctaccttttaatttatgtaactactattagtatgcata < 2:5218970‑M2/91‑68 (MQ=255) AGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTAcc > 1:5729314‑M1/1‑91 (MQ=255) GGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTCCCt < 2:4057757‑M1/91‑1 (MQ=255) GGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCt < 1:3037120‑M1/91‑1 (MQ=255) GGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCt > 2:5197877‑M1/1‑91 (MQ=255) GGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCt > 1:3854030‑M1/1‑91 (MQ=255) GGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCt > 1:4728268‑M1/1‑91 (MQ=255) GGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCt < 1:5014220‑M1/91‑1 (MQ=255) GTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTg < 2:3688752‑M1/91‑1 (MQ=255) TTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGc > 1:1218362‑M1/1‑91 (MQ=255) TTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGc > 1:3373844‑M1/1‑91 (MQ=255) TTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGcc < 1:5706447‑M1/91‑1 (MQ=255) tGGCAGACATTTCATAACTtgccaaacctttatataaaaaagaaatatctaccttttaatttatgtaactactattagtatgcatattcat < 2:5536800‑M2/91‑73 (MQ=255) GCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTg < 2:44912‑M1/91‑1 (MQ=255) GCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTg < 2:2564360‑M1/91‑1 (MQ=255) AGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTc < 2:3135165‑M1/91‑1 (MQ=255) gACATTTCATAACTtgccaaacctttatataaaaaagaaatatctaccttttaatttatgtaactactattagtatgcatattcattagtt < 2:1382442‑M2/91‑78 (MQ=255) cATTTCATAACTtgccaaacctttatataaaaaagaaatatctaccttttaatttatgtaactactattagtatgcatattccttagtttt < 2:80679‑M2/91‑80 (MQ=255) aTTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTAcc < 1:870336/91‑1 (MQ=255) ttCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACctc < 2:677578/91‑1 (MQ=255) ttCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACctc < 2:2576776/91‑1 (MQ=255) ttCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACctc < 2:4540363/91‑1 (MQ=255) tCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACctct < 2:1860249/91‑1 (MQ=255) cATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCtctc > 2:2380760/1‑91 (MQ=255) cATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCtctc < 1:3415710/91‑1 (MQ=255) aTAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTcc > 2:5136790/1‑91 (MQ=255) cTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTc < 2:2702032/91‑1 (MQ=255) cTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTc > 1:3958601/1‑91 (MQ=255) cTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTc > 1:1029347/1‑91 (MQ=255) | AACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCAGACATTTCATAACTTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCG > USA300TCH1516_ALE/2087962‑2088142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |