| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2797815 | 293 (0.980) | 15 (0.060) | 11/142 | NT | 5.5% | intergenic (+103/+164) | USA300HOU_RS14370/USA300HOU_RS14375 | N‑acetylmuramoyl‑L‑alanine amidase domain‑containing protein/N‑carbamoylsarcosine amidase |
| ? | USA300TCH1516_ALE | = 2797828 | 256 (0.970) | intergenic (+116/+151) | USA300HOU_RS14370/USA300HOU_RS14375 | N‑acetylmuramoyl‑L‑alanine amidase domain‑containing protein/N‑carbamoylsarcosine amidase | |||||
Only 100 of 406 total aligned reads displayed.
ATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCATCTCACACATTTTATAAA > USA300TCH1516_ALE/2797738‑2797918 | tAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACg < 2:5406972‑M2/91‑2 (MQ=255) gagatggcaattgaaacggatatgatgaggaacatttgaacataaaataatatatttatataaaacgACCCGAGGCATTCAGTTC‑GAACGc > 2:2825606‑M1/68‑91 (MQ=255) aGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACgcc > 1:1007998‑M2/1‑88 (MQ=255) gTATAAACAAGGAGTTCGGACTTAAACATAGTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACgcct > 2:2399153‑M2/1‑87 (MQ=255) aCAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTc > 2:1312396/1‑91 (MQ=255) aaGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGt < 1:4802520/91‑1 (MQ=255) aGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGtt > 2:4927544/1‑91 (MQ=255) aGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGtt < 2:3053413/91‑1 (MQ=255) ggAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGttt < 1:4186120/91‑1 (MQ=255) ggAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGttt > 1:5099563/1‑91 (MQ=255) ggAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGttt < 2:3352936/91‑1 (MQ=255) ttCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTtata > 2:5086093/1‑91 (MQ=255) cGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTtatata > 1:4566807/1‑91 (MQ=255) ggACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATGGAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATaa < 2:5672149/91‑1 (MQ=255) aCTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAat > 2:1023577/1‑91 (MQ=255) cTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAata < 2:4096102/91‑1 (MQ=255) ttAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAatat < 1:1900969/91‑1 (MQ=255) ttAAACATATGTCTGTTCATCAGTCTGATTTCTTATTCAATTAAACCCGGGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAatat < 1:2413596/91‑1 (MQ=255) tAAACATATTTCTGTTCACAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAatata < 1:5768751/91‑1 (MQ=255) aaaCATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAatatat > 2:2999361/1‑91 (MQ=255) aaaCATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAatatat < 1:5331545/91‑1 (MQ=255) aCATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATAtatta > 2:3228946/1‑91 (MQ=255) aCATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATAtatta > 1:2089112/1‑91 (MQ=255) cATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATAtattat < 2:228173/91‑1 (MQ=255) tatTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTAttt > 1:1064500/1‑91 (MQ=255) tatTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTAttt > 2:2028423/1‑91 (MQ=255) atTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTAtttt < 2:215967/91‑1 (MQ=255) ttCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTAt < 1:5406397/91‑1 (MQ=255) tCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATg > 2:5188365/1‑91 (MQ=255) tCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATg < 1:1646981/91‑1 (MQ=255) tCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATg > 1:2347352/1‑91 (MQ=255) cTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGt < 1:4387775/91‑1 (MQ=255) tGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGtt < 2:1703955/91‑1 (MQ=255) tGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGtt > 1:2236469/1‑91 (MQ=255) tGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGtt < 2:3940231/91‑1 (MQ=255) tGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGtt < 1:492319/91‑1 (MQ=255) ttCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCa > 1:2163064/1‑91 (MQ=255) cATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCaaa < 1:3995631/91‑1 (MQ=255) cATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCaaa > 1:4120316/1‑91 (MQ=255) cATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCGCGGGTCGTTTTATATAAATATATTATTTTATGTTCaaa < 1:5640602/91‑1 (MQ=255) aTAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAAt < 2:317163/91‑1 (MQ=255) tAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATg < 1:283467/91‑1 (MQ=255) tAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATg < 1:3494925/91‑1 (MQ=255) gTCTGATTTCTTTTTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTc < 2:3753472/91‑1 (MQ=255) gTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTc > 2:5282707/1‑91 (MQ=255) taatatatttatataaaacgACCCGAGGCGTTC‑GAACTGAATGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCt < 1:2591201‑M1/71‑1 (MQ=255) cTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCt < 2:3115974/91‑1 (MQ=255) tGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCtc > 1:3627520/1‑91 (MQ=255) aTTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCtcat < 1:849462/91‑1 (MQ=255) tttCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCtcatc > 1:3444267/1‑91 (MQ=255) ttCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCtcatca > 2:3796431/1‑91 (MQ=255) ttCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCtcatca > 2:3681434/1‑91 (MQ=255) ttCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCtcatca < 1:2270286/91‑1 (MQ=255) tCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTcatcat > 1:547484/1‑91 (MQ=255) cTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCata > 2:3575229/1‑91 (MQ=255) ttATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCatat > 2:4987494/1‑91 (MQ=255) ttATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCATCATCatat > 2:5563882/1‑91 (MQ=255) tCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGttt < 1:3011998/44‑1 (MQ=255) tCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGt > 1:2039903/1‑91 (MQ=255) tAAACCCGATGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATACTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCaa < 2:5018471/91‑1 (MQ=255) tAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCTTCATCATATCCGTTTCaa < 2:1512037/91‑1 (MQ=255) tAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCaa < 2:180706/91‑1 (MQ=255) tAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCaa < 1:5163149/91‑1 (MQ=255) aaaCCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAAt < 2:349317/91‑1 (MQ=255) aaCCCGAGGCATTCAGTTC‑GAACgcctcgggtttaattgaataagaaatcagacttatgaacagaaatatgtttaagtccgaactccttgt > 2:418947‑M2/1‑23 (MQ=255) aaCCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAAtt < 1:2708083/91‑1 (MQ=255) aaCCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAAtt < 1:315460/91‑1 (MQ=255) aaCCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAAtt > 1:118903/1‑91 (MQ=255) ACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATCTTATTTTATGTTCAACTGTTCCTCATCATATCCGTTTCAATTg < 2:4481005‑M1/91‑1 (MQ=255) CCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGc < 1:3312616‑M1/91‑1 (MQ=255) CCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCTTTTCAATTGcc < 2:5850029‑M1/91‑1 (MQ=255) CGAGGCCTTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCa < 1:1775863‑M1/91‑1 (MQ=255) CGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCa < 2:1605632‑M1/91‑1 (MQ=255) CGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCa < 2:1391953‑M1/91‑1 (MQ=255) CGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCa < 1:4230963‑M1/91‑1 (MQ=255) gAGGCATTCAGTTC‑GAACgcctcgggtttaattgaataagaaatcagacttatgaacagaaatatgtttaagtccgaactccttgtttata < 1:3940814‑M2/91‑74 (MQ=255) GAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCAt < 2:4787991‑M1/91‑1 (MQ=255) GAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCAt < 1:3865258‑M1/91‑1 (MQ=255) GAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCAt < 2:4751507‑M1/91‑1 (MQ=255) AGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCAtc < 2:264611‑M1/91‑1 (MQ=255) CATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCATCTCa < 1:5250846‑M1/91‑1 (MQ=255) aTTTAGTTT‑GATCGCCTTGAGTCGTTTTATGTAATTATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCATCTcac < 2:5808518/91‑1 (MQ=255) aTTCAGTTC‑GAACgcctcgggtttaattgaataagaaatcagacttatgaacagaaatatgtttaagtccgaactccttgtttatacttat < 1:3239376‑M2/91‑79 (MQ=255) aTTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCATCTcac < 2:828989/91‑1 (MQ=255) aTTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCATCTcac < 2:115637/91‑1 (MQ=255) ttCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCATCTcaca > 1:3704685/1‑91 (MQ=255) tCAGTTC‑GAACgcctcgggtttaattgaataagaaatcagacttatgaacagaaatatgtttaagtccgaactccttgtttatacttataa < 1:4313855‑M2/91‑81 (MQ=255) tCAGTTC‑GAACGCCTCGGGTCGTTTTATATATATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCATCTcacac > 1:5726606/1‑91 (MQ=255) tCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCATCTcacac < 1:5857884/91‑1 (MQ=255) cAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCATCTcacaca > 2:2764711/1‑91 (MQ=255) cAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCATCTcacaca < 2:662554/91‑1 (MQ=255) aGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCATCTCACACAt < 2:1874588/91‑1 (MQ=255) gTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCATCTCACACAtt > 2:3990604/1‑91 (MQ=255) tC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCATCTCACACAtttt > 2:2583088/1‑91 (MQ=255) gAACgcctcgggtttaattgaataagaaatcagacttatgaacagaaatatgtttaagtccgaactccttgtttatacttataaattttac < 2:4258347‑M2/91‑88 (MQ=255) gAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCATCTCACACATTTtat > 1:1482157/1‑91 (MQ=255) gAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCATCTCACACATTTtat > 1:685456/1‑91 (MQ=255) gAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCATCTCACACATTTtat < 1:1399803/91‑1 (MQ=255) aCGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCATCTCACACATTTTATaa > 1:4471592/1‑91 (MQ=255) cGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCATCTCACACATTTTATaaa > 2:5159589/1‑91 (MQ=255) | ATAAGTATAAACAAGGAGTTCGGACTTAAACATATTTCTGTTCATAAGTCTGATTTCTTATTCAATTAAACCCGAGGCATTCAGTTC‑GAACGCCTCGGGTCGTTTTATATAAATATATTATTTTATGTTCAAATGTTCCTCATCATATCCGTTTCAATTGCCATCTCACACATTTTATAAA > USA300TCH1516_ALE/2797738‑2797918 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |