| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2218228 | 235 (0.660) | 13 (0.050) | 6/124 | NT | 6.4% | intergenic (+21/+38) | USA300HOU_RS11330/fabZ | hypothetical protein/3‑hydroxyacyl‑[acyl‑carrier‑protein] dehydratase FabZ |
| ? | USA300TCH1516_ALE | = 2218242 | 197 (0.710) | intergenic (+35/+24) | USA300HOU_RS11330/fabZ | hypothetical protein/3‑hydroxyacyl‑[acyl‑carrier‑protein] dehydratase FabZ | |||||
Only 100 of 464 total aligned reads displayed.
TTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCT > USA300TCH1516_ALE/2218152‑2218332 | tcaacttgcttgtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATTaaa > 2:5197561‑M1/58‑91 (MQ=255) aaTCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaa > 1:1090973‑M2/1‑89 (MQ=255) aTCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaat > 2:1112687‑M2/1‑88 (MQ=255) ttgcttgtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATTAAATCttt > 1:6377735‑M1/53‑91 (MQ=255) tgatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttga < 1:54042‑M2/91‑10 (MQ=255) gatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaa < 1:4836450‑M2/91‑11 (MQ=255) atgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaat < 2:6523555‑M2/91‑12 (MQ=255) atgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaat < 2:171667‑M2/91‑12 (MQ=255) tgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatg < 2:4496993‑M2/91‑13 (MQ=255) tgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatg > 1:6053671‑M2/1‑79 (MQ=255) gCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgt > 2:896385‑M2/1‑78 (MQ=255) gCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgt > 2:5847400‑M2/1‑78 (MQ=255) gCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgt > 1:777631‑M2/1‑78 (MQ=255) agttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGttt > 1:504959‑M1/45‑91 (MQ=255) aGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgttt < 1:7006184‑M2/91‑16 (MQ=255) gTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgtttt < 2:2541779‑M2/91‑17 (MQ=255) gTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgtttt < 2:1867648‑M2/91‑17 (MQ=255) cTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgtttttt > 1:6808803‑M2/1‑73 (MQ=255) tAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGttttttt < 1:2234154/91‑1 (MQ=255) tAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGACTATGCCAACACATTAAATCTTTGAATGttttttt < 2:4139602/91‑1 (MQ=255) aaCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTg < 1:2675550/91‑1 (MQ=255) aaCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTg < 1:1013190/91‑1 (MQ=255) aaCCAAAGTTAAAGGATGAAAAATTAAAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTg < 1:6190337/91‑1 (MQ=255) aCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGt > 1:278424/1‑91 (MQ=255) aaGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGttttt > 2:4326314/1‑90 (MQ=255) aaGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGtttta < 1:2071268/91‑1 (MQ=255) gTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGttttatt < 2:2136366/91‑1 (MQ=255) gTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGttttatt > 2:3083067/1‑91 (MQ=255) aaaGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGttttatttta < 1:2414367/91‑1 (MQ=255) aGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACa > 2:1331584/1‑91 (MQ=255) aGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACa < 1:4135693/91‑1 (MQ=255) ggATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACAt > 2:2979243/1‑91 (MQ=255) aTGAAAAATTAGAAGTGTAAAATAAAAAACATTTAAAGATTATTTTAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACAtat < 2:6869287/91‑3 (MQ=255) gAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTTTTTTACAttttt > 2:3493295/1‑90 (MQ=255) aaaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGa < 1:2901059/91‑1 (MQ=255) aaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGaa > 2:3386484/1‑91 (MQ=255) ttAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTTTTTTTCTTCTTTAAtttc > 2:3833106/1‑89 (MQ=255) ttAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGc > 2:5018559/1‑91 (MQ=255) ttAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGc > 1:3518124/1‑91 (MQ=255) tAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCa < 2:3314943/91‑1 (MQ=255) gaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCaaa < 1:5885353/91‑1 (MQ=255) gaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCaaa > 2:2716774/1‑91 (MQ=255) aagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTTCAAAt > 2:5513270/1‑91 (MQ=255) aagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAAt < 1:6223544/91‑1 (MQ=255) aagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAAt > 2:3677629/1‑91 (MQ=255) agagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATg < 2:2479151/91‑1 (MQ=255) gagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGt > 1:4523262/1‑91 (MQ=255) gagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGt < 1:6601256/91‑1 (MQ=255) agTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTa < 1:1358848/91‑1 (MQ=255) aaaataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGt < 1:5978068/91‑1 (MQ=255) aaataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGtt < 1:1631783/91‑1 (MQ=255) aaataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGtt < 1:1802343/91‑1 (MQ=255) aaataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGtt > 1:2724985/1‑91 (MQ=255) ataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTca < 2:2289143/91‑1 (MQ=255) ataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTca < 2:5614693/91‑1 (MQ=255) ataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTca > 1:156159/1‑91 (MQ=255) AAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTTTTTTATTTTACATCTTGAATTGCAAATGTAAGTTcaca < 2:6373428‑M1/91‑1 (MQ=255) AAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTcaca > 2:5330648‑M1/1‑91 (MQ=255) AAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTcaca > 2:3905175‑M1/1‑91 (MQ=255) AAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTcaca > 1:4214770‑M1/1‑91 (MQ=255) AAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTAGATCTTGAATTGCAAATGTAAGTTCACAAc > 1:6433792‑M1/1‑91 (MQ=255) AAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAAc < 1:1149362‑M1/91‑1 (MQ=255) AAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAAc > 2:5391727‑M1/1‑91 (MQ=255) aaaCATTCAAAGAATATGCCAACACATTAAATCTTTGAATGTTTTTTTTTTTTTATTTTTTATTTTTAATTTCTTATTTATGTTTACaatt > 2:4953501/1‑89 (MQ=255) AAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACt > 2:6015788‑M1/1‑91 (MQ=255) AAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACt < 1:1953722‑M1/91‑1 (MQ=255) AAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACt > 1:5077988‑M1/1‑91 (MQ=255) ACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAc > 2:4012543‑M1/1‑91 (MQ=255) CATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTTTTTTTTTTTACATCTTGAATTGCAAATGTAATTTCACTTCTAca < 2:2369383‑M1/91‑1 (MQ=255) CATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTACTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAca < 1:5797556‑M1/91‑1 (MQ=255) TCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCaa > 1:3336687‑M1/1‑69 (MQ=255) TCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagc < 2:3257444‑M1/91‑1 (MQ=255) AAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagcaa > 2:4814868‑M1/1‑91 (MQ=255) aaGATTATGCCAACACATTAaatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatcattc < 2:1948830‑M2/91‑72 (MQ=255) AAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagcaag > 1:4681568‑M1/1‑91 (MQ=255) AAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagcaag > 2:5711836‑M1/1‑91 (MQ=255) AAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagcaag > 2:5095075‑M1/1‑91 (MQ=255) AAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAca > 2:3749720‑M1/1‑85 (MQ=255) AAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAca < 1:3749720‑M1/85‑1 (MQ=255) GATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 1:5006126‑M1/1‑91 (MQ=255) GATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 1:1534477‑M1/1‑91 (MQ=255) GATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 2:5925288‑M1/1‑91 (MQ=255) GATTATGCCAAAACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 2:7006184‑M1/1‑91 (MQ=255) tATGCCAACACATTAaatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatcattcgatta < 1:5729360‑M2/91‑77 (MQ=255) aTGCCAACACATTAAATCTTTGAATGTTTTTTTAGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGAcc > 1:6938733/1‑91 (MQ=255) tGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCa > 1:6665344/1‑91 (MQ=255) tGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCa < 2:665893/91‑1 (MQ=255) gCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCAt > 1:5204566/1‑91 (MQ=255) ccAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATc < 1:2189605/91‑1 (MQ=255) cAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCg < 1:5525368/91‑1 (MQ=255) aaCACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGa < 1:399535/91‑1 (MQ=255) acacATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGAc > 2:4576944/1‑91 (MQ=255) acacATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGAc < 1:3656027/91‑1 (MQ=255) cacaTTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACa < 2:1498228/91‑1 (MQ=255) cacaTTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACa < 2:2736899/91‑1 (MQ=255) cacaTTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACa < 1:1248877/91‑1 (MQ=255) caTTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGt < 2:6218659/91‑1 (MQ=255) aTTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTa > 1:4409345/1‑91 (MQ=255) tAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGc < 2:1402416/91‑1 (MQ=255) tAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGc > 2:3141750/1‑91 (MQ=255) | TTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCT > USA300TCH1516_ALE/2218152‑2218332 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |