| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012417 | = 2937 | 673 (1.050) | 8 (0.010) | 5/268 | 46.9 | 1.3% | intergenic (‑263/–) | USA300HOU_RS14900/– | hypothetical protein/– |
| ? | NC_012417 | = 2949 | 593 (0.960) | intergenic (‑275/–) | USA300HOU_RS14900/– | hypothetical protein/– | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 630 total aligned reads displayed.
TTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAA > NC_012417/2810‑3088 | ttAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGa < 2:215159/140‑1 (MQ=255) tAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAg > 2:61495/1‑140 (MQ=255) ttCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGttt < 2:38114/140‑1 (MQ=255) ttCAATTTTATTTGATACTTCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGCTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACTAGttt < 2:161715/140‑1 (MQ=255) ttCAATTTTATTTAATAATCCTTTTGACTTTTTAGAAAGTTTTAATTATTCATTGGTTTTCACATTCATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGttt < 2:232091/140‑1 (MQ=255) tCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTttc < 1:254651/140‑1 (MQ=255) cGATTTTATTTGATAATTCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTttct < 1:40939/140‑1 (MQ=255) cGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTttct < 1:237767/140‑1 (MQ=255) cGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTttct < 2:190970/140‑1 (MQ=255) gATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTttctt < 2:49524/140‑1 (MQ=255) attttattttATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTttcttc < 2:237395/140‑1 (MQ=255) aTTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTttcttc < 2:178057/140‑1 (MQ=255) aTTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTttcttc < 2:2207/140‑1 (MQ=255) ttttATTTGATAATACTTTTGACTTTTTAAAAAGTTTTATTTATCCAGTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTtcttct < 1:49216/140‑1 (MQ=255) tttATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTCGGTTTCGAAAGTCATAAAAAGAAGAAGGAATAGGTGGTTTTTTGAAACGAGTGTGAACGAGTTTcttctt < 1:221127/140‑1 (MQ=255) tttAATTGATAATCCTTTTGACTTTTTAGAAAGTATTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTcttctt < 1:82775/140‑1 (MQ=255) ttATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTCTTTATTCATTGGTTTTCACATTAATTTATTTAGATTTAAAGGGTCATAAAAAGACGAAGGAATAAGTTGTTTTTTGAAACGAGTTTGAAGGAGTTACTtcttg > 2:164508/1‑140 (MQ=255) ttATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGCCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTtcttg < 1:89230/140‑1 (MQ=255) tATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTtcttgt > 1:133478/1‑140 (MQ=255) tATTTGATAATCCATTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTtcttgt < 1:226287/140‑1 (MQ=255) aTTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTtcttgtc < 2:149875/140‑1 (MQ=255) aTTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTtcttgtc > 1:240827/1‑140 (MQ=255) tttGATAATGTTTTTGATGTTTTAGAAAGTTGTATTTACTCATTGGTTTTCACATTAAGTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATTTGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTtcttgtct < 2:180711/140‑1 (MQ=38) tttGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTtcttgtct < 2:256815/140‑1 (MQ=255) tGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGCAACGAGTGTGAACGAGTTTCTtcttgtcttg > 1:1927/1‑140 (MQ=255) aTAATCCTTTTGACTTTTTAGAAAGTTCTATTTATTCATTGGTTTCCCCATTCAATAGATTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGAt < 1:73158/140‑1 (MQ=38) aTCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑t < 2:14312/140‑1 (MQ=255) aTCATTTTGACTGGTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑t < 1:126581/140‑1 (MQ=255) tCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑ta < 1:2940/140‑1 (MQ=255) ccTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑tat > 1:141437/1‑140 (MQ=255) cTTTTGAATTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑tata < 2:186529/140‑1 (MQ=255) ttttGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑tatat > 2:167709/1‑140 (MQ=255) tttGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAAAGAGTTTCTTCTTGTCTTGATAC‑tatata > 2:249954/1‑140 (MQ=255) tGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGa > 1:186374/1‑140 (MQ=255) aCTTTTTATAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGGCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGaaa < 1:170319/140‑1 (MQ=255) cTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAAt > 1:243634/1‑140 (MQ=255) cTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAAt > 2:155907/1‑140 (MQ=255) tttttAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATa > 1:100090/1‑140 (MQ=255) tttttAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATa < 1:5784/140‑1 (MQ=255) tttAGAAAGTTGTATTTATTCATTGGTTTTAACATGAATGTATGTAGGTTTAGAGGATCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAAc < 1:8576/140‑1 (MQ=38) cgcatgTTTTATGTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCg < 1:110378/135‑1 (MQ=255) gAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGa > 1:128496/1‑140 (MQ=255) aGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGAGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGAttt < 1:136975/140‑1 (MQ=255) ttttATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTta < 2:114950/140‑1 (MQ=255) ttatttatTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTtata < 1:233051/140‑1 (MQ=255) ttatttatTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTtata < 1:160210/140‑1 (MQ=255) attCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTtatatatata > 1:151604/1‑140 (MQ=255) ttCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAg > 1:67405/1‑140 (MQ=255) cATGGGTTTTCACATTAATTTATTTAGGTTTAGAGCGGTATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCt < 1:165643/140‑1 (MQ=255) ttGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGt < 1:147564/140‑1 (MQ=255) tGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGACATACGAGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTa > 2:93857/1‑140 (MQ=255) tGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATCTATTTAGCTGTa > 2:260654/1‑140 (MQ=255) tGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTa < 1:76228/140‑1 (MQ=255) ttCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGt < 1:213353/140‑1 (MQ=255) acaTTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGa > 2:75196/1‑140 (MQ=255) aTTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACAAGTTTGTACGAGTTTCTTCTTGTTTTG‑TACGGAGAGAGAAATAATTAAAGATAATAGATATAGCTGTAACTGTTGata > 1:122589/1‑140 (MQ=255) ttAATTTATTTAGTTTGAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGatat < 1:198153/140‑1 (MQ=255) ttAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATTTAGCTGTAACTGTTGatat > 1:99685/1‑140 (MQ=255) ttAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGACTTTATAC‑TATATAGCCATACTGCGATTTTATATATATAGCTGTAACTGTTGatat > 2:65966/1‑140 (MQ=38) tAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACAGTTGATAtt > 2:32287/1‑140 (MQ=255) atttatttAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATGACTCGATTTTATATATATAGCTGTATCTGTTGATAtttc > 1:53688/1‑138 (MQ=255) tttatttaGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACa < 1:246556/140‑1 (MQ=255) ttatttaGGTTTAGATGGTCATAAAAAGAAGAAGGATTAAGTGCTTTTTTGAATTTTTTGTTAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAg < 2:43383/140‑1 (MQ=255) ttatttaGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTTATATTACAg > 2:245098/1‑140 (MQ=255) tatttaGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAgt > 1:143835/1‑140 (MQ=255) ttaGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGtt > 1:260920/1‑140 (MQ=255) gtaGGTTTAGAGGGTAATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAACTAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGtt < 2:135326/139‑1 (MQ=255) ggTTTAGAGGGACATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCATCTTGTCTTGATAC‑TATATAGAAATAAATCGATTTTATATATATAGCTGTAACTGTAGATATTACAGTGTTTac > 2:11774/1‑139 (MQ=255) agagGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGTTATTACAGTGTTTAAACttg > 1:79961/1‑140 (MQ=255) agagGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTACACgtg > 1:18103/1‑140 (MQ=255) gagGGTGAGAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACgtgt < 2:227362/140‑1 (MQ=255) agtgtaaTAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGtt < 2:52127/134‑1 (MQ=255) agGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGtt < 1:105688/140‑1 (MQ=255) gTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGttttt > 1:96231/1‑140 (MQ=255) tCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTtg < 2:145582/140‑1 (MQ=255) tCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTtg < 1:215976/140‑1 (MQ=255) aaaaaGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGCGTTTCGTCGTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCg > 1:180286/1‑140 (MQ=255) gaagaagGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGaaa > 1:63938/1‑140 (MQ=255) agaagGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAgg < 2:125466/140‑1 (MQ=255) gaagGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATTTATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGa > 1:210672/1‑140 (MQ=255) gaagGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGa < 1:44053/140‑1 (MQ=255) aagGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGaa > 1:115930/1‑140 (MQ=255) tAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTg < 1:228277/140‑1 (MQ=255) ggTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAg < 2:203697/129‑1 (MQ=255) ggTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGAc > 1:189490/1‑140 (MQ=255) gttgttTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAGATTTGACa < 2:174847/140‑1 (MQ=255) tttttGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATaaa < 2:108948/140‑1 (MQ=255) tgtgtGAAACGAGTGGGAACGAGTTTCTTGTTGTCTTGATAC‑TATATAGAAATAACTTGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATaaa < 2:11974/136‑1 (MQ=255) ttGAAACGAGTGTAAACTAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATaaaaaa < 2:253396/140‑1 (MQ=255) tGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAAc < 1:176679/140‑1 (MQ=255) tGAAACGAGTGTAAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTAAAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAAc < 2:209410/140‑1 (MQ=255) aaCGAGTGTGAAAGAATTTCTTCTTGTATTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACGGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAAcccc < 2:87912/140‑1 (MQ=255) aCGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCa > 1:218128/1‑140 (MQ=255) gagaGTGAACGAGTCTATACCTGTCGTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGt < 1:35318/140‑1 (MQ=255) gtgtGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTta < 1:25076/140‑1 (MQ=255) gtgtGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTta > 1:207247/1‑140 (MQ=255) tgtgAATGAGTTTTTGCTTGGCTTGATAA‑TATATATAAATAACTAGATTTTATATATATAGCTGTAACTGTTGATATTATAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTtat < 2:81156/140‑1 (MQ=255) tgAACGATTTTCTTTTTGTTTTGATAA‑TATATATAAATAAAACGATTTTATATATATATCTGTAAATGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTTAAAGGAAAATTTGACAATAAAAAACCCCAGTTatat < 2:197028/140‑1 (MQ=255) tgAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACCCGATTTTATATATATAGCTGTAACAGATGATATTACAGTGTATAAACTTGTTTTTATCCGTGAAAGCAAAATTTGACAATAAAAAACCCCAGTAatat > 2:129162/1‑140 (MQ=255) aCGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTAtattat < 1:156160/140‑1 (MQ=255) | TTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAC‑TATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAA > NC_012417/2810‑3088 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |