| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 842626 | 97 (0.990) | 9 (0.100) | 5/144 | NT | 9.7% | intergenic (+12/‑650) | uvrA/hprK | UvrABC system protein A/HPr kinase/phosphorylase |
| ? | USA300TCH1516_ALE | = 842653 | 80 (0.900) | intergenic (+39/‑623) | uvrA/hprK | UvrABC system protein A/HPr kinase/phosphorylase | |||||
Only 100 of 166 total aligned reads displayed.
TCAGACAAAGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTAAAAAGAATTATGTTA > USA300TCH1516_ALE/842536‑842716 | aGACAAAGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTg < 1:3593518/91‑1 (MQ=255) aGACAAAGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTg > 1:1647995/1‑91 (MQ=255) aCAAAGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGaa > 1:3028908/1‑91 (MQ=255) aCAAAGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGaa > 1:2807927/1‑91 (MQ=255) aCAAAGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGaa < 1:946339/91‑1 (MQ=255) aCAAAGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGaa < 1:946340/91‑1 (MQ=255) cAAAGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAg > 1:1190870/1‑91 (MQ=255) aaGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGa < 1:4046831/91‑1 (MQ=255) aGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGAt > 1:3599943/1‑91 (MQ=255) aGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGAt > 1:4103157/1‑91 (MQ=255) aGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGAt < 1:575800/91‑1 (MQ=255) gTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATg > 1:1051381/1‑91 (MQ=255) gTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATg > 1:2057145/1‑91 (MQ=255) catcatATACAGGAAAGTATTTAAACGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGACGtt < 1:3298078/91‑1 (MQ=255) atcatATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTta < 1:42541/91‑1 (MQ=255) tcatATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTtat > 1:3524729/1‑91 (MQ=255) atatACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATaa > 1:1664065/1‑91 (MQ=255) atatACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATaa > 1:3105767/1‑91 (MQ=255) atatACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGAATGTTATaa > 1:3977864/1‑91 (MQ=255) ataCAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAAt < 1:3710207/91‑1 (MQ=255) aCAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAAttt < 1:3418143/91‑1 (MQ=255) aGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTAt < 1:1853733/91‑1 (MQ=255) ctatcttaacataattctttttacgcatcttttctttctactattcattactaaattaataAAAAGAAGCGAAGGATGTTATAAATTTATc > 1:2877762‑M1/62‑91 (MQ=255) gAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATcc < 1:1925140/91‑1 (MQ=255) aaaGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGcgaaggataaatttataacatcct < 1:3877778‑M1/91‑25 (MQ=255) aaaGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGcgaaggataaatttataacatcct < 1:4015182‑M1/91‑25 (MQ=255) aaaGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCt > 1:1453162/1‑91 (MQ=255) aaaGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCt > 1:1452658/1‑91 (MQ=255) aaGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCtt > 1:358199/1‑91 (MQ=255) gTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCg < 1:641363/91‑1 (MQ=255) taacataattctttttacgcatcttttctttctactattcattactaaattaacaAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGc > 1:3490091‑M1/56‑91 (MQ=255) tATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGc > 1:2502744‑M2/1‑90 (MQ=255) tATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGc < 1:732564‑M2/91‑2 (MQ=255) aatTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGcgaaggataaatttataacatccttcac < 1:462318‑M1/90‑29 (MQ=255) aTTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGct < 1:1884750‑M2/91‑3 (MQ=255) aTTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGct > 1:3280011‑M2/1‑89 (MQ=255) tttAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGcgaaggataaatttataacatccttcactt > 1:1335698‑M1/1‑61 (MQ=255) tAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGcttct < 1:3747453‑M2/91‑6 (MQ=255) aaaGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGcgaaggataaatttataacatccttcacttcttt < 1:3986216‑M1/91‑35 (MQ=255) aaaGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGcgaaggataaatttataacatccttcacttcttt < 1:3986034‑M1/91‑35 (MQ=255) ttctttttacgcatcttttctttctactattcattactaaattaataAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCttttt > 1:2247926‑M1/48‑91 (MQ=255) tctttttacgcatcttttctttctactattcattactaaattaataAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTtta > 1:1280256‑M1/47‑91 (MQ=255) aagTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTttat < 1:1110116/91‑1 (MQ=255) tttttacgcatcttttctttctactattcattactaaattaataAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTttatt > 1:2186667‑M1/45‑91 (MQ=255) agTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTttatt < 1:2545348/91‑1 (MQ=255) tACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTaa > 1:3905073/1‑91 (MQ=255) tACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTaa < 1:3930381/91‑1 (MQ=255) aCTTGAACGAGATAAACAAAATTCTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAAt < 1:276135/91‑1 (MQ=255) cTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAAtt > 1:1529556/1‑91 (MQ=255) cgcatcttttctttctactattcattactaaattaataAAAAGAAGCGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTa > 1:156351‑M1/39‑91 (MQ=255) aaCGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGt < 1:1784015/91‑1 (MQ=255) aCGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTa < 1:2674811/91‑1 (MQ=255) gagaTAAACAAAATACTGAAGATAAATAAGATTCAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAAt < 1:3398994/91‑1 (MQ=255) tttctttctactattcattactaaattaataAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGa > 1:1823865‑M1/32‑91 (MQ=255) gaTAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGa > 1:695434/1‑91 (MQ=255) aaaCAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAAta > 1:2113717/1‑91 (MQ=255) aaCAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAAtag > 1:3495366/1‑91 (MQ=255) aaCAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAAtag < 1:3733244/91‑1 (MQ=255) aCAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAAtagt < 1:2429835/91‑1 (MQ=255) cAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAAtagta > 1:542038/1‑91 (MQ=255) cAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAAtagta > 1:1025356/1‑91 (MQ=255) aaaaTACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAAtagtag > 1:408308/1‑91 (MQ=255) aaaaTACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAAtagtag > 1:1635032/1‑91 (MQ=255) aaaaTACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAAtagtag > 1:1076683/1‑91 (MQ=255) aaaTACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTaga < 1:2338141/91‑1 (MQ=255) aCTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTagaaaga > 1:3345213/1‑91 (MQ=255) aCTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTagaaaga > 1:4001539/1‑91 (MQ=255) aCTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTagaaaga < 1:1411384/91‑1 (MQ=255) cTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTagaaagaa > 1:3018090/1‑91 (MQ=255) aaGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGaaagaaaag > 1:987163/1‑91 (MQ=255) aaGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGaaagaaaag < 1:3162957/91‑1 (MQ=255) aGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGaaagaaaaga < 1:1856945/91‑1 (MQ=255) gATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGAt < 1:658057/91‑1 (MQ=255) taaataaGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGc < 1:555855/91‑1 (MQ=255) aataaGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGt > 1:3081496/1‑91 (MQ=255) aataaGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGt > 1:3228122/1‑91 (MQ=255) aataaGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGt > 1:3227458/1‑91 (MQ=255) aaGATTAAAAGAAGTGAAGGGTGTTGTAAATTTACCCTTCACTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTaaa > 1:492084/1‑91 (MQ=255) aaGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTaaa > 1:3810111/1‑91 (MQ=255) aaGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTaaa < 1:3258096/91‑1 (MQ=255) aaGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTaaa > 1:3304284/1‑91 (MQ=255) aGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGcttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtac < 1:2879421‑M2/91‑52 (MQ=255) aGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTaaaa > 1:563289/1‑91 (MQ=255) aTTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTAAAAAg > 1:1510410/1‑91 (MQ=255) AAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTAAAAAGAATTa < 1:517516‑M1/91‑1 (MQ=255) AAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTAAAAAGAATTa > 1:2934588‑M1/1‑91 (MQ=255) AAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTAAAAAGAATTa < 1:740834‑M1/91‑1 (MQ=255) agaagcgaaggataaatttataacatccttcacttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttctttta < 1:493577‑M1/91‑87 (MQ=255) aagcgaaggataaatttataacatccttcacttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttttaaa < 1:59642‑M1/91‑89 (MQ=255) aagcgaaggataaatttataacatccttcacttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttttaaa < 1:487680‑M1/91‑89 (MQ=255) agcgaaggataaatttataacatccttcacttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttttaaat > 1:3280011‑M1/1‑2 (MQ=255) agcgaaggataaatttataacatccttcacttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttttaaat < 1:1884750‑M1/91‑90 (MQ=255) AGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTAAAAAGAATTATGtt > 1:601387‑M1/1‑91 (MQ=255) AGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTAAAAAGAATTATGtt > 1:379289‑M1/1‑91 (MQ=255) gcgaaggataaatttataacatccttcacttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttttaaata > 1:2693813‑M1/1‑1 (MQ=255) gcgaaggataaatttataacatccttcacttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttttaaata < 1:732564‑M1/91‑91 (MQ=255) gcgaaggataaatttataacatccttcacttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttttaaata > 1:2502744‑M1/1‑1 (MQ=255) gTGAAGGATGTTATAAATTTATCCTTCGcttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttttaaata < 1:462259‑M2/91‑64 (MQ=255) gTGAAGGATGTTATAAATTTATCCTTCActtcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttttaaata < 1:3942872‑M2/91‑64 (MQ=255) GTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTAAAAAGAATTATGTTa > 1:3562111‑M1/1‑91 (MQ=255) | TCAGACAAAGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTAAAAAGAATTATGTTA > USA300TCH1516_ALE/842536‑842716 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |