| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 878353 | 74 (0.750) | 9 (0.100) | 5/140 | NT | 12.3% | coding (359/1023 nt) | ssp | Extracellular matrix protein‑binding protein emp |
| ? | USA300TCH1516_ALE | = 878384 | 63 (0.730) | coding (390/1023 nt) | ssp | Extracellular matrix protein‑binding protein emp | |||||
Only 100 of 146 total aligned reads displayed.
TAGATAAAAACTTTGTCGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATTACGCAAAACAAAGTAAACCACCA > USA300TCH1516_ALE/878263‑878443 | tAGATAAAAACTTTGTCGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAA < 1:3989803‑M1/91‑1 (MQ=255)tAGATAAAAACTTTGTCGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAA < 1:3989734‑M1/91‑1 (MQ=255) aGATAAAAACTTTGTCGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCaacaaac > 1:3359658/1‑91 (MQ=255) gATAAAAACTTTGTCGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCaacaaaca > 1:2328122/1‑91 (MQ=255) gATAAAAACTTTGTCGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCaacaaaca > 1:3901913/1‑91 (MQ=255) aaaaaCTTTGTCGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATc < 1:1534905/91‑1 (MQ=255) aaaaCTTTGTCGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATcc > 1:1943462/1‑91 (MQ=255) aaaaCTTTGTCGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATcc > 1:1700296/1‑91 (MQ=255) aaaCTTTGTCGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCa < 1:2406443/91‑1 (MQ=255) tttGTCGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCtt > 1:3148566/1‑91 (MQ=255) ttGTCGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTc < 1:3432153/91‑1 (MQ=255) gTCGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTcac > 1:2138836/1‑91 (MQ=255) gTCGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTcac > 1:2367482/1‑91 (MQ=255) gTCGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTcac > 1:358137/1‑91 (MQ=255) gTCGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTcac > 1:254860/1‑91 (MQ=255) cGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCtcaa > 1:3213004/1‑91 (MQ=255) cGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCacaa < 1:1368932/91‑1 (MQ=255) cGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCacaa < 1:1080977/91‑1 (MQ=255) cGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCacaa < 1:1081539/91‑1 (MQ=255) tACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTAAAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCacaaca > 1:3503669/1‑91 (MQ=255) aCCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATACTCGCGTGAATGTAGCAACAAACAATCCAGCTTCacaacca < 1:188477/91‑3 (MQ=255) aCCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCAcaacaa > 1:2303142/1‑91 (MQ=255) tCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATa < 1:2613142/91‑1 (MQ=255) aaaGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAg < 1:181902/91‑1 (MQ=255) aaaGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAg < 1:3986481/91‑1 (MQ=255) aaaGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAg > 1:4128614/1‑91 (MQ=255) aaaGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAg < 1:3522100/91‑1 (MQ=255) aaGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGc < 1:729524/91‑1 (MQ=255) aaGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGc > 1:219979/1‑91 (MQ=255) aGTTAGGAAACATTGTGCCAGAGTACAAAGAAACCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCa > 1:2421302/1‑91 (MQ=255) ttAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATt > 1:2929184‑M2/1‑90 (MQ=255) tAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATtt < 1:1872529‑M2/91‑3 (MQ=255) tAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGAGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATtt < 1:1874789‑M2/91‑3 (MQ=255) aGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAAatgcttatcaacttgttgtgaagctggattgttt < 1:1169978‑M1/91‑35 (MQ=255) ggAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATtttg < 1:37736‑M2/91‑5 (MQ=255) ggAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATtttg < 1:1482833‑M2/91‑5 (MQ=255) ggAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATtttg < 1:3975627‑M2/91‑5 (MQ=255) aaCATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATtttgttg < 1:2017011‑M2/91‑8 (MQ=255) aCATTGTGCCAGAGTACAAATAAATCAATAATGGCGTGAATGTATCAACAAAatgcttatcaacttgttgtgaagctgcattgtttgttgc < 1:4104115‑M1/91‑40 (MQ=255) aCATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAAatgcttatcaacttgttgtgaagctggattgtttgttgc < 1:2062403‑M1/91‑40 (MQ=255) aCATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATtttgttgc < 1:1904554‑M2/91‑9 (MQ=255) cATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCACtttgtcgct < 1:3733824‑M2/91‑10 (MQ=255) aTTGTGCTAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATattgttgcta > 1:2079653‑M2/1‑81 (MQ=255) aTTGTGCCAGAGTACAAAGAAATCACTAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATtttgttgcta > 1:3866122‑M2/1‑81 (MQ=255) aTTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAAatgcttatcaacttgttgtgaagctggattgtttgttgcta < 1:4068239‑M1/91‑42 (MQ=255) ttGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTaa < 1:3075972/91‑1 (MQ=255) cAGAGTACAAAGAAATCAAGAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGccc < 1:1528464/91‑1 (MQ=255) agagTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCa < 1:2586583/91‑1 (MQ=255) agagTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCa < 1:2587165/91‑1 (MQ=255) aaaGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTaa > 1:952478/1‑91 (MQ=255) aaaGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCACTTTGTTGCTAAAGGCCCAGAAGTaa > 1:3871368/1‑91 (MQ=255) gAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATa < 1:3355179/91‑1 (MQ=255) gAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATa < 1:2256445/91‑1 (MQ=255) aaaTCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAg > 1:234352/1‑91 (MQ=255) tCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGAtt > 1:3151217/1‑91 (MQ=255) aataatCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATtta < 1:262897/91‑1 (MQ=255) aataatCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATtta > 1:2652637/1‑91 (MQ=255) aataatCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATtta > 1:1343131/1‑91 (MQ=255) aataatCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATtta > 1:3019864/1‑91 (MQ=255) ataatCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATttat < 1:1049050/91‑1 (MQ=255) taatCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATttatt > 1:3610175/1‑91 (MQ=255) taatCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATttatt > 1:261247/1‑91 (MQ=255) tCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATTACg > 1:430887/1‑91 (MQ=255) tCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATTACg < 1:1548066/91‑1 (MQ=255) cgcgTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATTACGc < 1:1770679/91‑1 (MQ=255) gcgTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATTACGCa > 1:135040/1‑91 (MQ=255) tGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATTACGCaaaa < 1:3838690/91‑1 (MQ=255) tGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATTACGCaaaa < 1:3838458/91‑1 (MQ=255) tGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATTACGCAAAACaaa < 1:3318853/91‑1 (MQ=255) tGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATGACGCAAAACaaa < 1:3178123/91‑1 (MQ=255) aGCAACAAAatgcttatcaacttgttgtgaagctggattgtttgttgctacattcacgcgattattgatttctttgtactctggcacaatg < 1:1709840‑M1/91‑83 (MQ=255) gCAACAAACAATGCAGCTTCACAACAAGTTGATAAGCATtttgttgatacattcacgccattattgatttatttgtactctggcacaatgt < 1:4104115‑M2/91‑53 (MQ=255) gCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATtttgttgctacattcacgcgattattgatttctttgtactctggcacaatgt < 1:389982‑M2/91‑53 (MQ=255) gCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATtttgttgctacattcacgcgattattgatttctttgtactctggcacaatgt < 1:2062403‑M2/91‑53 (MQ=255) gCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATtttgttgctacattcacgcgattattgatttctttgtactctggcacaatgt < 1:4104277‑M2/91‑53 (MQ=255) gCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATTACGCAAAACAAAGTaa < 1:3468944/91‑1 (MQ=255) gCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATTACGCAAAACAAAGTaa > 1:403579/1‑91 (MQ=255) caacaaAatgcttatcaacttgttgtgaagctggattgtttgttgctacattcacgcgattattgatttctttgtactctggcacaatgtt < 1:2017011‑M1/91‑85 (MQ=255) caacaaAatgcttatcaacttgttgtgaagctggattgtttgttgctacattcacgcgattattgatttctttgtactctggcacaatgtt > 1:3323066‑M1/1‑7 (MQ=255) aacaaacaATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATTACGCAAAACAAAGTAAac > 1:2159196/1‑91 (MQ=255) aacaaacaATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATTACGCAAAACAAAGTAAac > 1:1613353/1‑91 (MQ=255) aacaaacaATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATTACGCAAAACAAAGTAAac > 1:2325934/1‑91 (MQ=255) acaaacaaTCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATTACGCAAAACAAAGTAAacc < 1:503830/91‑1 (MQ=255) acaaacaaTCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATTACGCAAAACAAAGTAAacc > 1:3925440/1‑91 (MQ=255) acaaacaaTCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATTACGCAAAACAAAGTAAacc > 1:3925456/1‑91 (MQ=255) caaAatgcttatcaacttgttgtgaagctggattgtttgttgctacattcacgcgattattgatttctttgtactctggcacaatgtttcc < 1:37736‑M1/91‑88 (MQ=255) caaAatgcttatcaacttgttgtgaagctggattgtttgttgctacattcacgcgattattgatttctttgtactctggcacaatgtttcc > 1:135618‑M1/1‑4 (MQ=255) caaAatgcttatcaacttgttgtgaagctggattgtttgttgctacattcacgcgattattgatttctttgtactctggcacaatgtttcc < 1:1482833‑M1/91‑88 (MQ=255) caaAatgcttatcaacttgttgtgaagctggattgtttgttgctacattcacgcgattattgatttctttgtactctggcacaatgtttcc < 1:1484898‑M1/91‑88 (MQ=255) caaAatgcttatcaacttgttgtgaagctggattgtttgttgctacattcacgcgattattgatttctttgtactctggcacaatgtttcc < 1:3975627‑M1/91‑88 (MQ=255) caaAatgcttatcaacttgttgtgaagctggattgtttgttgctacattcacgcgattattgatttctttgtactctggcacaatgtttcc < 1:2883482‑M1/91‑88 (MQ=255) aaacaaTCCAGCTTCACAACAAGTTGATAAGCATtttgttgctacattcacgcgattattgatttctttgtactctggcacaatgtttcct < 1:3159354‑M2/91‑58 (MQ=255) aaacaaTCCAGCTTCACAACAAGTTGATAAGCATtttgttgctacattcacgcgattattgatttctttgtactctggcacaatgtttcct < 1:1169978‑M2/91‑58 (MQ=255) aacaaGCCAGCTGCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATTACGCAAAACAAAGTAAaccacc < 1:2468016/91‑1 (MQ=255) aaatgcttatcaacttgttgtgaagctggattgtttgttgctacattctcgcgattattgatttctttgtactctggcacaatgtttccta < 1:1874789‑M1/91‑90 (MQ=255) aaatgcttatcaacttgttgtgaagctggattgtttgttgctacattcacgcgattattgatttctttgtactctggcacaatgtttccta < 1:1872588‑M1/91‑90 (MQ=255) acaaTCCAGCTTCACAACAAGTTGATAAGCATtttgttgctacattcacgcgattattgatttctttgtactctggcacaatgtttcctaa < 1:1304127‑M2/91‑60 (MQ=255) acaaTCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATTACGCAAAACAAAGTAAAccacca > 1:1397380/1‑91 (MQ=255) acaaTCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATTACGCAAAACAAAGTAAAccacca > 1:2295538/1‑91 (MQ=255) aatgcttatcaacttgttgtgaagctggattgtttgttgctacattcacgcgattattgatttctttgtactctggcacaatgtttcctaa > 1:2929184‑M1/1‑1 (MQ=255) | TAGATAAAAACTTTGTCGTACCAGAATCAAAGTTAGGAAACATTGTGCCAGAGTACAAAGAAATCAATAATCGCGTGAATGTAGCAACAAACAATCCAGCTTCACAACAAGTTGATAAGCATTTTGTTGCTAAAGGCCCAGAAGTAAATAGATTTATTACGCAAAACAAAGTAAACCACCA > USA300TCH1516_ALE/878263‑878443 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |