| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1119593 = | 104 (1.060) | 8 (0.100) | 4/136 | NT | 9.4% | intergenic (+12/+297) | typA/USA300HOU_RS05545 | GTP‑binding protein TypA/BipA/hypothetical protein |
| ? | USA300TCH1516_ALE | 1119635 = | 65 (0.780) | intergenic (+54/+255) | typA/USA300HOU_RS05545 | GTP‑binding protein TypA/BipA/hypothetical protein | |||||
Only 100 of 136 total aligned reads displayed.
AAGAAAGAAAATTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACT > USA300TCH1516_ALE/1119503‑1119683 | ttaatatctgaataaacaagttagaaatttgaaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgcca < 1:1547920‑M1/1‑1 (MQ=255) aatatctgaataaacaagttagaaatttgaaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccaaa < 1:3868776‑M1/3‑1 (MQ=255) atatctgaataaacaagttagaaatttgaaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccaaaa > 1:1272137‑M1/88‑91 (MQ=255) atatctgaataaacaagttagaaatttgaaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccaaaa > 1:1271790‑M1/88‑91 (MQ=255) aaagaaaATTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATaaaa > 1:3302613/1‑91 (MQ=255) tatctgaataaacaagttagaaatttgaaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAag > 1:3770537‑M1/87‑91 (MQ=255) tatctgaataaacaagttagaaatttgaaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAag < 1:2519156‑M1/5‑1 (MQ=255) aagaaaATTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAag < 1:2947977/91‑1 (MQ=255) aagaaaATTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAag < 1:2947993/91‑1 (MQ=255) aagaaaATTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAag > 1:883810/1‑91 (MQ=255) atctgaataaacaagttagaaatttgaaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAaga < 1:2577100‑M1/6‑1 (MQ=255) agaaaATTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAaga > 1:754748/1‑91 (MQ=255) agaaaATTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAaga > 1:1546255/1‑91 (MQ=255) gaaaATTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAagag > 1:817118/1‑91 (MQ=255) aaaaTTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAgaga < 1:854617/91‑1 (MQ=255) aaaTTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGaa > 1:683361/1‑91 (MQ=255) aaaTTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGaa < 1:430422/91‑1 (MQ=255) aaaTTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGaa < 1:3625582/91‑1 (MQ=255) aaTTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAg < 1:1002434/91‑1 (MQ=255) aTTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGc > 1:3277901/1‑91 (MQ=255) aTTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGc > 1:3277933/1‑91 (MQ=255) ataaacaaggtagaaatttgaaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAAGAGAAGCt > 1:3976045‑M1/80‑91 (MQ=255) tttAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTg < 1:581001/91‑1 (MQ=255) ttAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGa > 1:110782/1‑91 (MQ=255) aaaCAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGc > 1:2533360/1‑91 (MQ=255) aaCAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCg > 1:467198/1‑91 (MQ=255) aCAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGa > 1:3039391/1‑91 (MQ=255) aCAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGa < 1:2585171/91‑1 (MQ=255) aaaaaTGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATg < 1:2313786/91‑1 (MQ=255) aaaaTGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGa < 1:567476/91‑1 (MQ=255) aaaTGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGaa > 1:2637663/1‑91 (MQ=255) aaTGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGaaa < 1:2559778/91‑1 (MQ=255) tGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGt > 1:935549/1‑91 (MQ=255) gTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGtt < 1:1046878/91‑1 (MQ=255) gTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGtt > 1:3556893/1‑91 (MQ=255) cGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCt > 1:753158/1‑91 (MQ=255) cGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCt > 1:2242041/1‑91 (MQ=255) aaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAg < 1:1943149‑M1/32‑1 (MQ=255) aaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGc > 1:2750351‑M1/59‑91 (MQ=255) aaaaaGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGc < 1:3414855/91‑1 (MQ=255) aaaaaGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGc < 1:3936367/91‑1 (MQ=255) aatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCt > 1:666803‑M1/58‑91 (MQ=255) aatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCt > 1:2453208‑M1/58‑91 (MQ=255) aatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCt > 1:1492471‑M1/58‑91 (MQ=255) aatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCt > 1:4016349‑M1/58‑91 (MQ=255) aatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCt > 1:4016478‑M1/58‑91 (MQ=255) aaaaGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCt < 1:4049686/91‑1 (MQ=255) aaaGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCtt > 1:659475/1‑91 (MQ=255) aagaagCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTtc < 1:1189167/91‑1 (MQ=255) agCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCtt > 1:1860217/1‑91 (MQ=255) agCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCtt > 1:1860236/1‑91 (MQ=255) agCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCtt > 1:3723355/1‑91 (MQ=255) gCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCttt > 1:1122587/1‑91 (MQ=255) cAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCtttt > 1:3150171/1‑91 (MQ=255) cAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCtttt > 1:1674220/1‑91 (MQ=255) aaGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTgg > 1:2229863/1‑91 (MQ=255) aaGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTgg < 1:1941103/91‑1 (MQ=255) aaGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTgg > 1:3734172/1‑91 (MQ=255) aaacaaaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATataata < 1:1327174/91‑1 (MQ=255) aaacaaaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATataata < 1:3653426/91‑1 (MQ=255) aaacaaaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATataata < 1:3653380/91‑1 (MQ=255) acaaaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATAtt > 1:2681810/1‑91 (MQ=255) caaaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATAttt < 1:3504557/91‑1 (MQ=255) aaaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTg < 1:3405070/91‑1 (MQ=255) aaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGa > 1:3943166/1‑91 (MQ=255) atgatgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGaa < 1:316987/91‑1 (MQ=255) atgatgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGaa < 1:317256/91‑1 (MQ=255) gatgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGaaaa > 1:2571836/1‑91 (MQ=255) atgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGaaaaa < 1:1445575/91‑1 (MQ=255) atgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGaaaaa > 1:3515313/1‑91 (MQ=255) atgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGaaaaa < 1:1446050/91‑1 (MQ=255) atgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGaaaaa < 1:3280986/91‑1 (MQ=255) atgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGaaaaa > 1:4118286/1‑91 (MQ=255) tgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAg < 1:2921705/91‑1 (MQ=255) tgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAg < 1:227121/91‑1 (MQ=255) gCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAgt > 1:3876439/1‑91 (MQ=255) cAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAgtg < 1:4127258/91‑1 (MQ=255) aaGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAgtgt < 1:538073/91‑1 (MQ=255) aGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGTAAGTTGCTTAGCTTCTCTTTTGTCATATAATATTTGAAAAAGTGtt < 1:3284750/91‑1 (MQ=255) aaaaCGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTa < 1:71478/91‑1 (MQ=255) gAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGc < 1:580338/91‑1 (MQ=255) gAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGc < 1:2490124/91‑1 (MQ=255) aataatTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCt > 1:363418/1‑91 (MQ=255) ataatTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCta > 1:437754/1‑91 (MQ=255) ataatTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGATTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCta > 1:4137091/1‑91 (MQ=255) taatTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCtat > 1:3716056/1‑91 (MQ=255) aatTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCtatt > 1:1945741/1‑91 (MQ=255) atTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCtatta < 1:2042507/91‑1 (MQ=255) tttAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCtattat > 1:549219/1‑91 (MQ=255) tttAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCtattat > 1:1002149/1‑91 (MQ=255) aCATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTcc > 1:3787233/1‑91 (MQ=255) aCATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTcc < 1:3509635/91‑1 (MQ=255) cATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCt < 1:3096656/91‑1 (MQ=255) cATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCt < 1:2841711/91‑1 (MQ=255) aataaAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGtt > 1:2868722/1‑91 (MQ=255) ataaAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTa > 1:3049256/1‑91 (MQ=255) ataaAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTa > 1:909021/1‑91 (MQ=255) AAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACt > 1:3802767‑M1/1‑91 (MQ=255) AAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACt > 1:2750256‑M1/1‑91 (MQ=255) AAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACt > 1:3610212‑M1/1‑91 (MQ=255) | AAGAAAGAAAATTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACT > USA300TCH1516_ALE/1119503‑1119683 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |