| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1453877 = | 81 (0.820) | 14 (0.160) | 8/146 | NT | 15.5% | coding (45/2799 nt) | odhA | 2‑oxoglutarate dehydrogenase E1 component |
| ? | USA300TCH1516_ALE | 1453904 = | 79 (0.880) | coding (18/2799 nt) | odhA | 2‑oxoglutarate dehydrogenase E1 component | |||||
Only 100 of 119 total aligned reads displayed.
GCTGAATAAGACTTGTAAATCTTCTGGTACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAAT > USA300TCH1516_ALE/1453787‑1453963 | tactttaacaaataactaaatagtgatattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaag > 1:2717459‑M1/91‑91 (MQ=255)gCTGAATAAGACTTGTAAATCTTCTGGTACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCg > 1:3834337/1‑91 (MQ=255)gCTGAATAAGACTTGTAAATCTTCTGGTACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCg > 1:1434964/1‑91 (MQ=255)gCTGAATAAGACTTGTAAATCTTCTGGTACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCg > 1:191433/1‑91 (MQ=255) cTGAATAAGACTTGTAAATCTTCTGGTACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGa > 1:931062/1‑91 (MQ=255) actttaacaaataactaaatagtgatattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaaga > 1:1831471‑M1/90‑91 (MQ=255) actttaacaaataactaaatagtgatattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaaga > 1:3110414‑M1/90‑91 (MQ=255) actttaacaaataactaaatagtgatattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaaga > 1:1831588‑M1/90‑91 (MQ=255) ctttaacaaataactaaatagtgatattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaagaa < 1:481681‑M1/3‑1 (MQ=255) ctttaacaaataactaaatagtgatattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaagaa < 1:790891‑M1/3‑1 (MQ=255) ctttaacaaataactaaatagtgatattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaagaa < 1:821270‑M1/3‑1 (MQ=255) tttaacaaataactaaatagtgatattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaagaag < 1:1123229‑M1/4‑1 (MQ=255) gAATAAGACTTGTAAATCTTCTGGTACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAg > 1:3451827/1‑91 (MQ=255) aacaaataactaaatagtgatattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacggaagaaaaGAAGttt > 1:3619965‑M1/85‑91 (MQ=255) aacaaataactaaatagtgatattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaaGAAGttt < 1:1360114‑M1/7‑1 (MQ=255) aacaaataactaaatagtgatattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaaGAAGttt > 1:3584852‑M1/85‑91 (MQ=255) aacaaataactaaatagtgatattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaaGAAGttt > 1:2890470‑M1/85‑91 (MQ=255) aaGACTTGTAAATCTTCTGGTACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTa > 1:45813/1‑91 (MQ=255) aCTTGTAAATCTTCTGGTACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAg > 1:4098234/1‑91 (MQ=255) aCTTGTAAATCTTCTGGTACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAg > 1:111850/1‑91 (MQ=255) tGTAAATCTTCTGGTACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAg > 1:402702/1‑91 (MQ=255) tGTAAATCTTCTGGTACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAg > 1:2717963/1‑91 (MQ=255) aaatagtgatattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaaGAAGTTTACAGGAGCctc > 1:3941316‑M1/74‑91 (MQ=255) aTCTTCTGGTACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCctct < 1:965337/91‑1 (MQ=255) atagtgatattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaaGAAGTTTACAGGAGCCTCTg > 1:2527247‑M1/72‑91 (MQ=255) atagtgatattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaaGAAGTTTACAGGAGCCTCTg > 1:462581‑M1/72‑91 (MQ=255) agtgatattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaaGAAGTTTACAGGAGCCTCTGaa > 1:3311541‑M1/70‑91 (MQ=255) agtgatattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaaGAAGTTTACAGGAGCCTCTGaa > 1:1807352‑M1/70‑91 (MQ=255) tctGGTACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGaaa > 1:1441568/1‑91 (MQ=255) gtgatattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaaGAAGTTTACAGGAGCCTCTGaaa > 1:3306805‑M1/69‑91 (MQ=255) gtgatattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaaGAAGTTTACAGGAGCCTCTGaaa > 1:3307141‑M1/69‑91 (MQ=255) ctGGTACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAAc > 1:3354177/1‑91 (MQ=255) atattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaaGAAGTTTACAGGAGCCTCTGAAActt > 1:579995‑M1/66‑91 (MQ=255) atattattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaaGAAGTTTACAGGAGCCTCTGAAActt > 1:525933‑M1/66‑91 (MQ=255) gTACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAActtc > 1:3256174/1‑91 (MQ=255) gTACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAActtc > 1:2381778/1‑91 (MQ=255) tACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAActtct > 1:3078794/1‑91 (MQ=255) tACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAActtct > 1:3078636/1‑91 (MQ=255) attattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaaGAAGTTTACAGGAGCCTCTGAAActtct > 1:1599288‑M1/64‑91 (MQ=255) ttattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaaGAAGTTTACAGGAGCCTCTGAAActtctt > 1:3150809‑M1/63‑91 (MQ=255) gatgatGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACttcttttc > 1:2267361/1‑91 (MQ=255) gatgatGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACttcttttc > 1:497678/1‑91 (MQ=255) tgatgGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACttcttttctt > 1:2367598/1‑91 (MQ=255) gatgGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTtcttttcttt > 1:3947490/1‑91 (MQ=255) atgGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTtttctttc > 1:2892171/1‑91 (MQ=255) tgGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCg > 1:111197/1‑91 (MQ=255) tgGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCg > 1:895574/1‑91 (MQ=255) ggATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGt < 1:1130021/91‑1 (MQ=255) tCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAg < 1:3777654/91‑1 (MQ=255) tCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAg > 1:2649615/1‑91 (MQ=255) tCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAg > 1:2648307/1‑91 (MQ=255) tCTTGTAAAAACTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTAAAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAg > 1:2246532/1‑91 (MQ=255) ttGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTc > 1:3149788/1‑91 (MQ=255) ttGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTc > 1:3428826/1‑91 (MQ=255) tGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCa < 1:371871/91‑1 (MQ=255) gTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCAt < 1:3412267/91‑1 (MQ=255) gTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCAt > 1:4122962/1‑91 (MQ=255) gTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCAt > 1:4116570/1‑91 (MQ=255) gTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCAt > 1:2410185/1‑91 (MQ=255) aaaaaGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCAttt < 1:2448916/91‑1 (MQ=255) aaaaGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTATACAGGAGCCTCTGAAACTTCTTTTCTATCGTTAGTCAtctt > 1:2399861/1‑91 (MQ=255) aaaGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTa > 1:508791/1‑91 (MQ=255) catcatATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACAccc > 1:3459781/1‑91 (MQ=255) atcatATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCt < 1:2325825/91‑1 (MQ=255) atcatATAGATCTAACATTAGACCTAAATTCGCACCGAAGTATACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCt > 1:3594835/1‑91 (MQ=255) tcatATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTc < 1:869689/91‑1 (MQ=255) tcatATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTc < 1:3933160/91‑1 (MQ=255) tcatATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTc > 1:1531249/1‑91 (MQ=255) tcatATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTc > 1:1531276/1‑91 (MQ=255) tcatATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTc > 1:2759557/1‑91 (MQ=255) catATAGGTCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTcc < 1:2075818/91‑1 (MQ=255) catATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTcc > 1:3880620/1‑91 (MQ=255) atatAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCca < 1:1844768/91‑1 (MQ=255) taGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACaa < 1:483919/91‑1 (MQ=255) aTCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACaaaaa > 1:3359377/1‑91 (MQ=255) tAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGt > 1:1960904/1‑91 (MQ=255) aatgttAGATCTCAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGtt > 1:3188890/5‑91 (MQ=255) aaCATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGtt < 1:3144213/91‑1 (MQ=255) aaCATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGtt > 1:402564/1‑91 (MQ=255) aCATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTg < 1:592003/91‑1 (MQ=255) aCATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTg > 1:1516224/1‑91 (MQ=255) aCATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTg > 1:4122697/1‑91 (MQ=255) aCATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTg < 1:3899733/91‑1 (MQ=255) aGACCTAGATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACg < 1:2077406/91‑1 (MQ=255) aGACCTAGATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACg < 1:2077478/91‑1 (MQ=255) aGACCTACATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACg < 1:2077582/91‑1 (MQ=255) aGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACg > 1:3667737/1‑91 (MQ=255) gACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGc < 1:2913079/91‑1 (MQ=255) aCCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCt < 1:3996199/91‑1 (MQ=255) aCCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCt > 1:726030/1‑91 (MQ=255) ccTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCtt < 1:758883/91‑1 (MQ=255) aaTTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACaa > 1:3488587/1‑91 (MQ=255) aaTTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACaa > 1:63515/1‑91 (MQ=255) aTTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAAt < 1:2022225/91‑1 (MQ=255) ttCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATg < 1:828062/91‑1 (MQ=255) tCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGt < 1:2368539/91‑1 (MQ=255) cGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGta < 1:581447/91‑1 (MQ=255) gCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACCAAAATGTTGAAACGCTTACCATGtaa > 1:939991/1‑91 (MQ=255) cACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCCTTTTACACCCTCCACAAAAATGTTGAAACTCTTACAATGtaat > 1:4140151/1‑91 (MQ=255) cACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGtaat > 1:353614/1‑91 (MQ=255) | GCTGAATAAGACTTGTAAATCTTCTGGTACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAAT > USA300TCH1516_ALE/1453787‑1453963 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |