| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1453877 = | 81 (0.820) | 14 (0.160) | 8/146 | NT | 15.5% | coding (45/2799 nt) | odhA | 2‑oxoglutarate dehydrogenase E1 component |
| ? | USA300TCH1516_ALE | 1453904 = | 79 (0.880) | coding (18/2799 nt) | odhA | 2‑oxoglutarate dehydrogenase E1 component | |||||
Only 100 of 126 total aligned reads displayed.
TACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGTTATTTGTTAAAGTAG > USA300TCH1516_ALE/1453814‑1453994 | tACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAActtct > 1:3078636/1‑91 (MQ=255)tACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAActtct > 1:3078794/1‑91 (MQ=255) ttattacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaaGAAGTTTACAGGAGCCTCTGAAActtctt > 1:3150809‑M1/63‑91 (MQ=255) ttacattgtaagcgtttcaacatttttgtggagggtgtaaaatgactaacgaaagaaaaGAAGTTTACAGGAGCCTCTGAAACttcttttc > 1:653301‑M1/60‑91 (MQ=255) gatgatGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACttcttttc > 1:2267361/1‑91 (MQ=255) gatgatGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACttcttttc > 1:497678/1‑91 (MQ=255) tgatgGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACttcttttctt > 1:2367598/1‑91 (MQ=255) tgatgGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACttcttttctt > 1:3125858/1‑91 (MQ=255) gatgGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTtcttttcttt > 1:3947490/1‑91 (MQ=255) atgGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTtttctttc > 1:2892171/1‑91 (MQ=255) atgGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTtttctttc > 1:833018/1‑91 (MQ=255) tgGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCg > 1:111197/1‑91 (MQ=255) tgGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCg > 1:895574/1‑91 (MQ=255) ggATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGt < 1:1130021/91‑1 (MQ=255) tCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAg > 1:2648307/1‑91 (MQ=255) tCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAg < 1:3777654/91‑1 (MQ=255) tCTTGTAAAAACTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTAAAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAg > 1:2246532/1‑91 (MQ=255) ttGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTc > 1:3149788/1‑91 (MQ=255) ttGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTc > 1:3428826/1‑91 (MQ=255) tGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCa < 1:371871/91‑1 (MQ=255) gTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCAt > 1:4116570/1‑91 (MQ=255) gTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCAt < 1:3412267/91‑1 (MQ=255) aaaaaGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCAttt < 1:2448916/91‑1 (MQ=255) aaaaGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTATACAGGAGCCTCTGAAACTTCTTTTCTATCGTTAGTCAtctt > 1:2399861/1‑91 (MQ=255) aaaGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTa > 1:508791/1‑91 (MQ=255) catcatATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACAccc > 1:3459781/1‑91 (MQ=255) atcatATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCt < 1:2325825/91‑1 (MQ=255) atcatATAGATCTAACATTAGACCTAAATTCGCACCGAAGTATACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCt > 1:3594835/1‑91 (MQ=255) tcatATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTc < 1:3933160/91‑1 (MQ=255) tcatATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTc > 1:1531249/1‑91 (MQ=255) tcatATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTc > 1:1531276/1‑91 (MQ=255) tcatATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTc > 1:3720285/1‑91 (MQ=255) tcatATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTc < 1:869689/91‑1 (MQ=255) tcatATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTc > 1:2759557/1‑91 (MQ=255) catATAGGTCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTcc < 1:2075818/91‑1 (MQ=255) catATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTcc > 1:3880620/1‑91 (MQ=255) atatAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCca < 1:1844768/91‑1 (MQ=255) ataGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCcaca > 1:3366011/1‑91 (MQ=255) tAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGt > 1:1960904/1‑91 (MQ=255) aatgttAGATCTCAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGtt > 1:3188890/5‑91 (MQ=255) aaCATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGtt > 1:2202767/1‑91 (MQ=255) aaCATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGtt < 1:3144213/91‑1 (MQ=255) aCATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTg > 1:1516224/1‑91 (MQ=255) aCATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTg > 1:4122697/1‑91 (MQ=255) aGACCTAGATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACg < 1:2077406/91‑1 (MQ=255) aGACCTAGATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACg < 1:2077478/91‑1 (MQ=255) aGACCTACATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACg < 1:2077582/91‑1 (MQ=255) aGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACg > 1:3667737/1‑91 (MQ=255) aCCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCt > 1:726030/1‑91 (MQ=255) aCCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCt < 1:3996199/91‑1 (MQ=255) aaTTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACaa > 1:63515/1‑91 (MQ=255) aaTTCACACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACaa < 1:4073548/91‑1 (MQ=255) aTTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAAt < 1:2022225/91‑1 (MQ=255) ttCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATg < 1:828062/91‑1 (MQ=255) tCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGt < 1:2368539/91‑1 (MQ=255) cGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGta < 1:581447/91‑1 (MQ=255) gaaaagaagtttcagaggctcctgtaaacttcTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGtaa > 1:653301‑M2/33‑91 (MQ=255) gCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACCAAAATGTTGAAACGCTTACCATGtaa > 1:939991/1‑91 (MQ=255) cACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCCTTTTACACCCTCCACAAAAATGTTGAAACTCTTACAATGtaat > 1:4140151/1‑91 (MQ=255) cACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGtaat > 1:353614/1‑91 (MQ=255) agaagtttcagaggctcctgtaaacttcTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTaataat > 1:1599288‑M2/29‑91 (MQ=255) aagtttcagaggctcctgtaaacttcTTTTCTTTCGTTAGTCATTTTACACCCTCCACGAAAATGTTGAAACGCTTACAATGTAATAatat > 1:3527486‑M2/27‑91 (MQ=255) aagtttcagaggctcctgtaaacttcTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAatat > 1:525933‑M2/27‑91 (MQ=255) aagtttcagaggctcctgtaaacttcTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAatat > 1:579995‑M2/27‑91 (MQ=255) AAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAatat > 1:1665879‑M1/1‑91 (MQ=255) AAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAatat > 1:2002839‑M1/1‑91 (MQ=255) AGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATc > 1:3547714‑M1/1‑91 (MQ=255) tttcagaggctcctgtaaacttcTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCAc > 1:3307141‑M2/24‑91 (MQ=255) tttcagaggctcctgtaaacttcTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCAc > 1:3306805‑M2/24‑91 (MQ=255) TTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCAc > 1:2937454‑M1/1‑91 (MQ=255) ttcagaggctcctgtaaacttcTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACt > 1:3311541‑M2/23‑91 (MQ=255) ttcagaggctcctgtaaacttcTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACt > 1:1807352‑M2/23‑91 (MQ=255) TACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTa < 1:499880‑M1/91‑1 (MQ=255) cagaggctcctgtaaacttcTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTAt > 1:2527247‑M2/21‑91 (MQ=255) cagaggctcctgtaaacttcTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTAt > 1:462581‑M2/21‑91 (MQ=255) cAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTAtt > 1:1241887/1‑91 (MQ=255) gaggctcctgtaaacttcTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTAttt > 1:3941316‑M2/19‑91 (MQ=255) ggAGTCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTAGTTa > 1:3268150/1‑91 (MQ=255) ggAGGCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTACTTa > 1:3267965/1‑91 (MQ=255) gAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAg < 1:3020044/91‑1 (MQ=255) aGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGt < 1:579113/91‑1 (MQ=255) gCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGtt > 1:475677/1‑91 (MQ=255) gCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGtt > 1:3647618/1‑91 (MQ=255) ccTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGTTa < 1:2879322/91‑1 (MQ=255) ccTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGTTa < 1:2695962/91‑1 (MQ=255) ccTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGTTa < 1:2875980/91‑1 (MQ=255) ccTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGTTa < 1:3545477/91‑1 (MQ=255) ctGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGTTAttt < 1:3158242/91‑1 (MQ=255) tGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGTTATTTg > 1:515135/1‑91 (MQ=255) tGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGTTATTTg > 1:2659194/1‑91 (MQ=255) aaacttcTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGTTATTTGtt > 1:2890470‑M2/8‑91 (MQ=255) aaacttcTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGTTATTTGtt > 1:2632613‑M2/8‑91 (MQ=255) aaacttcTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGTTATTTGtt < 1:1360114‑M2/84‑1 (MQ=255) aaacttcTTTTCTTCCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGTTATTTGtt > 1:3619965‑M2/8‑91 (MQ=255) cttcTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGTTATTTGTTaaa < 1:1123229‑M2/87‑1 (MQ=255) ttcTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGTTATTTGTTAAAg < 1:481681‑M2/88‑1 (MQ=255) ttcTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGTTATTTGTTAAAg < 1:790891‑M2/88‑1 (MQ=255) ttcTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGTTATTTGTTAAAg < 1:821270‑M2/88‑1 (MQ=255) tcTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGTTATTTGTTAAAGt > 1:1831471‑M2/3‑91 (MQ=255) cTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGTTATTTGTTAAAGTa > 1:2717459‑M2/2‑91 (MQ=255) | TACAGATGATGGATCTTGTAAAAAGTCATCATATAGATCTAACATTAGACCTAAATTCGCACCGAAGTTTACAGGAGCCTCTGAAACTTCTTTTCTTTCGTTAGTCATTTTACACCCTCCACAAAAATGTTGAAACGCTTACAATGTAATAATATCACTATTTAGTTATTTGTTAAAGTAG > USA300TCH1516_ALE/1453814‑1453994 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |