| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1619603 = | 95 (0.970) | 12 (0.130) | 6/148 | NT | 11.5% | intergenic (+6/+99) | proC/rnz | Pyrroline‑5‑carboxylate reductase/Ribonuclease Z |
| ? | USA300TCH1516_ALE | 1619653 = | 96 (1.060) | intergenic (+56/+49) | proC/rnz | Pyrroline‑5‑carboxylate reductase/Ribonuclease Z | |||||
Only 100 of 135 total aligned reads displayed.
ATATGATTTAGTATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTA > USA300TCH1516_ALE/1619513‑1619693 | atatGATTTAGTATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAaaac‑aa > 1:3526216/1‑91 (MQ=255)atatGATTTAGTATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAaaac‑aa > 1:2970069/1‑91 (MQ=255) attttaattttgtaaaagattttgatagttttaaaatctaatgacaaagtaataaacaatgcttgccaaataacaataaattataaaaata > 1:997695‑M1/91‑91 (MQ=255) gATTTAGTATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑ccc > 1:35212/1‑91 (MQ=255) gATTTAGTATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑ccc > 1:1345792/1‑91 (MQ=255) taattttgtaaaagattttgatagttttaaaatctaatgacaaagtaataaacaatgcttgccaaataacaataaattataaaaatAA‑ccc < 1:726435‑M1/5‑1 (MQ=255) aTTTAGTATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCg < 1:3074048/91‑1 (MQ=255) tttAGTATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGc > 1:2155268/1‑91 (MQ=255) aattttgtaaaagattttgatagttttaaaatctaatgacaaagtaataaacaatgcttgccaaataacaataaattataaaaatAA‑CCCg > 1:2512280‑M1/86‑91 (MQ=255) aattttgtaaaagattttgatagttttaaaatctaatgacaaagtaataaacaatgcttgccaaataacaataaattataaaaatAA‑CCCg > 1:2905702‑M1/86‑91 (MQ=255) aattttgtaaaagattttgatagttttaaaatctaatgacaaagtaataaacaatgcttgccaaataacaataaattataaaaatAA‑CCCg > 1:3012153‑M1/86‑91 (MQ=255) ttAGTATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGcc < 1:55463/91‑1 (MQ=255) tcagtATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAa‑ca < 1:268050/87‑1 (MQ=255) tATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAa‑ca < 1:1352888/91‑1 (MQ=255) tATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAa‑ca < 1:333502/91‑1 (MQ=255) tCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑caca > 1:76740/1‑91 (MQ=255) tATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATg > 1:2484412/1‑91 (MQ=255) tATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATg > 1:1001875/1‑91 (MQ=255) ttttCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTa < 1:2883013/91‑1 (MQ=255) tttCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTAt > 1:2561708/1‑91 (MQ=255) ttCGAAGATCGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CAGATGTATg > 1:2078656/1‑91 (MQ=255) tCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGc > 1:3157927/1‑91 (MQ=255) cGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGca > 1:410880/1‑91 (MQ=255) gAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGcat > 1:1727573/1‑91 (MQ=255) gAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGcat > 1:3716215/1‑91 (MQ=255) aGATTGTCTAAATGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGcatca > 1:971305/1‑91 (MQ=255) aGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGcatca < 1:3313048/91‑1 (MQ=255) aGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGcatca > 1:2335010/1‑91 (MQ=255) gATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGcatcat > 1:701926/1‑91 (MQ=255) ttGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCg > 1:3918066/1‑91 (MQ=255) cTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAg > 1:3320411/1‑91 (MQ=255) cTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAg > 1:3375107/1‑91 (MQ=255) taaaatctaatgacaaagtaataaacaatgcttgccaaataacaataaattataaaaatAA‑CCCGTCAAACACATGTATGCATCATCGCaa > 1:2534044‑M1/60‑91 (MQ=255) aaCGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCAc < 1:688088/91‑1 (MQ=255) cGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACtg < 1:3820252/91‑1 (MQ=255) gCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACtgt < 1:263950/91‑1 (MQ=255) gCTGCCGTCGACCGTAGTATTGAACCTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACtgt < 1:3861354/91‑1 (MQ=255) taatgacaaagtaataaacaatgcttgccaattaacaataaattataaaaatAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACtgtg > 1:1696489‑M1/53‑91 (MQ=255) taatgacaaagtaataaacaatgcttgccaaataacaataaattataaaaatAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACtgtg > 1:1697485‑M1/53‑91 (MQ=255) taatgacaaagtaataaacaatgcttgccaaataacaataaattataaaaatAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACtgtg > 1:3718942‑M1/53‑91 (MQ=255) taatgacaaagtaataaacaatgcttgccaaataacaataaattataaaaatAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACtgtg > 1:3718079‑M1/53‑91 (MQ=255) gCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGtt > 1:3581159/1‑91 (MQ=255) ccGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGttt > 1:525781/1‑91 (MQ=255) tgacaaagtgataaacaatgcttgccaaataacaatagattataaaaatAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGttt > 1:4054081‑M1/50‑91 (MQ=255) cGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTg > 1:3380336/1‑91 (MQ=255) gTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGa > 1:3512102/1‑91 (MQ=255) gTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGa < 1:2944526/91‑1 (MQ=255) tCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGAc < 1:1421375/91‑1 (MQ=255) gACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACgg > 1:2359181/1‑91 (MQ=255) gACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACgg < 1:4154195/91‑1 (MQ=255) aCCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACggg < 1:2762571/91‑1 (MQ=255) aCCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACggg < 1:2762500/91‑1 (MQ=255) ccGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGt > 1:4050618/1‑91 (MQ=255) ccGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGt > 1:4049838/1‑91 (MQ=255) gtagtaTTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTa > 1:1298857/1‑91 (MQ=255) tagtaTTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTAt > 1:3912429/1‑91 (MQ=255) aataaacaatgcttgccaaataacaataaattataaaaatAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTa > 1:2188151‑M1/41‑91 (MQ=255) ataaacaatgcttgccaaataacaataaattataaaaacAAACCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTa > 1:2850817‑M1/40‑91 (MQ=255) taTTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTAtttt > 1:773110/1‑91 (MQ=255) aTTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTAttttt > 1:2786375/1‑91 (MQ=255) caatgcttgccaaataacaataaattataaaaatAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTta > 1:3443327‑M1/35‑91 (MQ=255) gAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTtata > 1:2474387/1‑91 (MQ=255) aCTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAAt > 1:425925/1‑91 (MQ=255) cTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAAtt < 1:1734335/91‑1 (MQ=255) cTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAAtt > 1:1311176/1‑91 (MQ=255) tttCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAAttt < 1:746551/91‑1 (MQ=255) ttCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTa > 1:2277615/1‑91 (MQ=255) ttCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTa > 1:2276520/1‑91 (MQ=255) cTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTAtt > 1:2254658/1‑91 (MQ=255) aaTATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGt > 1:2917724/1‑91 (MQ=255) aaTATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGt > 1:1588164/1‑91 (MQ=255) atatAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGtt < 1:1193969/91‑1 (MQ=255) tataGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTa < 1:1133801/91‑1 (MQ=255) tataGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTa > 1:1557644/1‑91 (MQ=255) taGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTAtt > 1:2974333/1‑91 (MQ=255) taGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTAtt > 1:573960/1‑91 (MQ=255) taGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTAtt > 1:421269/1‑91 (MQ=255) agaCCAATAAAAAC‑ACA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGc > 1:3539587/1‑91 (MQ=255) agaCCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGc < 1:149068/91‑1 (MQ=255) agaCCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGc > 1:424498/1‑91 (MQ=255) gaCCAATAAAAACAAAA‑CCCGCCAA‑CACATGTATGCATCATCACAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGc > 1:712725/1‑91 (MQ=255) gaCCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCa < 1:3379056/91‑1 (MQ=255) gaCCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCa < 1:1650791/91‑1 (MQ=255) gaCCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCa > 1:2338832/1‑91 (MQ=255) aCCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCaa < 1:2029828/91‑1 (MQ=255) aCCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCaa < 1:3241024/91‑1 (MQ=255) aCCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCaa < 1:2029718/91‑1 (MQ=255) aCCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCaa > 1:2650881/1‑91 (MQ=255) aCCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCaa < 1:3240524/91‑1 (MQ=255) cAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGATATTTGGCAAGc < 1:1220135/91‑1 (MQ=255) aTAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCAt > 1:3959292/1‑91 (MQ=255) tAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCAtt > 1:111812/1‑91 (MQ=255) aac‑aaa‑cCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGttt > 1:2183872/1‑91 (MQ=255) ac‑aaa‑cCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGTtta < 1:2782226/91‑1 (MQ=255) ac‑aaa‑cCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGTtta < 1:2782195/91‑1 (MQ=255) ac‑aaa‑cCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGTtta > 1:2404574/1‑91 (MQ=255) c‑aaa‑cCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGTttat > 1:155586/1‑91 (MQ=255) c‑aaa‑cCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGTttat < 1:3172944/91‑1 (MQ=255) aaa‑cCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGTttatt < 1:1409537/91‑1 (MQ=255) AA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGTttatta < 1:2871235‑M1/91‑1 (MQ=255) | ATATGATTTAGTATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAAC‑AAA‑CCCGCCAA‑CACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTA > USA300TCH1516_ALE/1619513‑1619693 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |