| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1789630 = | 83 (0.840) | 9 (0.110) | 6/138 | NT | 11.5% | intergenic (‑111/+59) | gapA2/coaE | Glyceraldehyde‑3‑phosphate dehydrogenase 2/Dephospho‑CoA kinase |
| ? | USA300TCH1516_ALE | 1789673 = | 67 (0.790) | intergenic (‑154/+16) | gapA2/coaE | Glyceraldehyde‑3‑phosphate dehydrogenase 2/Dephospho‑CoA kinase | |||||
Only 100 of 139 total aligned reads displayed.
TATGTGTTATACTTTATGGAATTAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAATCTTCTTCTCCGTAATTCGGCTTTTCAA > USA300TCH1516_ALE/1789540‑1789720 | tATGTGTTATACTTTATGGAATTAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA > 1:1695584‑M1/1‑91 (MQ=255) aaaacaaaaccttgagagattgttagaagaagaaggttatattgaaaagccgaattacggagaagaagattaatattacactataaataA‑‑g > 1:1097915‑M1/90‑91 (MQ=255) aTGTGTTATACTTTATGGAATTAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑G > 1:1839642‑M1/1‑91 (MQ=255) aaacaaaaccttgagagattgttagaagaagaaggttatattgaaaagccgaattacggagaagaagattaatattacactataaataA‑‑Gt > 1:584154‑M1/89‑91 (MQ=255) aaacaaaaccttgagagattgttagaagaagaaggttatattgaaaagccgaattacggagaagaagattaatattacactataaataA‑‑Gt < 1:641368‑M1/3‑1 (MQ=255) gtgtTATACTTTATGGAATTAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTC < 1:1823781‑M1/91‑1 (MQ=255) gtgtTATACTTTATGGAATTAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTC < 1:2033887‑M1/91‑1 (MQ=255) aacaaaaccttgagagattgttagaagaagaaggttatattgaaaagccgaattacggcgaagaagattaatattacactataaataA‑‑GTc > 1:3409760‑M1/88‑91 (MQ=255) aacaaaaccttgagagattgttagaagaagaaggttatattgaaaagccgaattacggagaagaagattaatattacactataaataA‑‑GTc < 1:2610145‑M1/4‑1 (MQ=255) aacaaaaccttgagagattgttagaagaagaaggttatattgaaaagccgaattacggagaagaagattaatattacactataaataA‑‑GTc > 1:1348764‑M1/88‑91 (MQ=255) gtTATACTTTATGGAATTAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCAT < 1:1796779‑M1/91‑1 (MQ=255) gtTATACTTTATGGAATTAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCAT < 1:3118388‑M1/91‑1 (MQ=255) gtTATACTTTATGGAATTAGTATAGCATATTATATGAAATTTGAAAGCGCTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCAT > 1:2010953‑M1/1‑91 (MQ=255) ttATACTTTATGGAATTAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATT > 1:2968953‑M1/1‑91 (MQ=255) ccttgagagattgttagaagaagaaggttatattgaaaagccgaattacggagaagaagattaatattacactataaataA‑‑GTCAttactt < 1:402963‑M1/11‑1 (MQ=255) tATGGAATTAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATC‑‑GTCATTACTtacat > 1:1505321/1‑91 (MQ=255) tATGGAATTAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTtacat < 1:196852/91‑1 (MQ=255) aTGGAATTAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTtacata > 1:3803877/1‑91 (MQ=255) tGGAATTAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTtacatac > 1:1246630/1‑91 (MQ=255) tGGAATTAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTtacatac < 1:2297727/91‑1 (MQ=255) ggAATTAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTtacataca > 1:883085/1‑91 (MQ=255) ggAATTAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTtacataca < 1:2194673/91‑1 (MQ=255) aaTTAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATc < 1:2358279/91‑1 (MQ=255) aaTTAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATc < 1:3128665/91‑1 (MQ=255) aTTAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCa > 1:3929650/1‑91 (MQ=255) aTTAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCa > 1:1072981/1‑91 (MQ=255) ttAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCaa > 1:254077/1‑91 (MQ=255) ttAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCaa > 1:2317595/1‑91 (MQ=255) ttAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCaa > 1:254075/1‑91 (MQ=255) gTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAAcgc > 1:510102/1‑91 (MQ=255) taGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGcgta > 1:3043086/1‑91 (MQ=255) taGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGcgta < 1:1042796/91‑1 (MQ=255) gCATATTATATGAAATTTGACAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGcgtacg > 1:1234170/1‑91 (MQ=255) gCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGcgtacg > 1:2651531/1‑91 (MQ=255) atatTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGcgtacgta > 1:319436/1‑91 (MQ=255) gaaggttatattgaaaagccgaattacggagaagaagattaatattacactataaataA‑‑GTCATTACTTACATACATCAACGCGTACGTaa > 1:627167‑M1/59‑91 (MQ=255) gaaggttatattgaaaagccgaattacggagaagaagattaatattacactataaataA‑‑GTCATTACTTACATACATCAACGCGTACGTaa > 1:2975742‑M1/59‑91 (MQ=255) aaggttatattgaaaagccgaattacggagaagaagattaatattacactataaataA‑‑GTCATTACTTACATACATCAACGCGTACGTaaa > 1:1031432‑M1/58‑91 (MQ=255) ttatATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTtacgtacgcgttgatgtatgtaag < 1:1493484‑M1/91‑25 (MQ=255) ttatATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAaag < 1:2492473‑M2/91‑4 (MQ=255) aggttatattgaaaagccgaattacggagaagaagattaatattacactataaataA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAg > 1:773531‑M1/57‑91 (MQ=255) tataTGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAaagt > 1:198005‑M2/1‑87 (MQ=255) atatGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAaagta > 1:3748523‑M2/1‑86 (MQ=255) atatGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAaagta < 1:3798832‑M2/91‑6 (MQ=255) atatGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAaagta < 1:3633376‑M2/91‑6 (MQ=255) tatGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAaagtaa < 1:3083231‑M2/91‑7 (MQ=255) aaaTTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAaagtaatgac > 1:1551710‑M2/1‑81 (MQ=255) aaaTTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAaagtaatgac < 1:1830805‑M2/91‑11 (MQ=255) aaaTTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAaagtaatgac > 1:1551582‑M2/1‑81 (MQ=255) ttgaaaagccgaattacggagaagaagattaatattacactataaataA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACt > 1:2510686‑M1/49‑91 (MQ=255) ttgaaaagccgaattacggagaagaagattaatattacactataaataA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACt > 1:2327719‑M1/49‑91 (MQ=255) ttgaaaagccgaattacggagaagaagattaatattacactataaataA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACt > 1:2513256‑M1/49‑91 (MQ=255) tttGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTtacgtacgcgttgatgtatgtaagtaatgactat < 1:1812436‑M1/91‑35 (MQ=255) tttGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACtta > 1:20696/1‑91 (MQ=255) ttGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACttat < 1:3573837/91‑1 (MQ=255) gAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACttattt > 1:913776/1‑91 (MQ=255) aaGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACttatttat > 1:2307972/1‑91 (MQ=255) aaGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACttatttat > 1:3704123/1‑91 (MQ=255) aGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTtata > 1:742270/1‑91 (MQ=255) aGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTtata > 1:742343/1‑91 (MQ=255) aGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTtata > 1:3999322/1‑91 (MQ=255) cGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATGACTTtacgtacgcgttgatgtatgtaagtaatgactattttttata < 1:3296190‑M1/91‑43 (MQ=255) gTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAgtg < 1:3361422/91‑1 (MQ=255) ttttCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAgtgt < 1:2425438/91‑1 (MQ=255) attacggagaagaagattaatattacactataaataA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAgtgt > 1:3457395‑M1/37‑91 (MQ=255) ttCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTaa > 1:53072/1‑91 (MQ=255) ttCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTaa > 1:1309982/1‑91 (MQ=255) ttCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTaa > 1:2614598/1‑91 (MQ=255) cGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTtacgtacgcgttgatgtatgtaagtaatgactattttttataaaaaaga < 1:2029618‑M1/91‑50 (MQ=255) gagaagaagattaatattacactataaaaaATAGTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAata > 1:1497140‑M1/31‑91 (MQ=255) gTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATAtt < 1:935968/91‑1 (MQ=255) gTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATAtt > 1:449148/1‑91 (MQ=255) gTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATAtt > 1:448621/1‑91 (MQ=255) gTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATAtt < 1:4096059/91‑1 (MQ=255) gTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATAtt < 1:2866684/91‑1 (MQ=255) ttGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTa > 1:2947502/1‑91 (MQ=255) tGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTaa < 1:4093989/91‑1 (MQ=255) tGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTaa > 1:512331/1‑91 (MQ=255) atttatttATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAAtc < 1:2299881/91‑1 (MQ=255) atttatttATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAAtc < 1:3750846/91‑1 (MQ=255) tttatCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAAtcttctt > 1:3039220/1‑91 (MQ=255) ttatCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAAtcttcttc < 1:363393/91‑1 (MQ=255) tatCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAAtcttcttct < 1:1993737/91‑1 (MQ=255) tatCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAAtcttcttct > 1:826717/1‑91 (MQ=255) tCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAaagtaatgactattttttataaaaaagataaataaatcaacg < 1:2029618‑M2/91‑43 (MQ=255) tCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAATCTTCTTCTcc < 1:590441/91‑1 (MQ=255) cTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAATCTTCTTCTCCg < 1:2161663/91‑1 (MQ=255) ttttttATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAATCTTCTTCTCCGt > 1:513643/1‑91 (MQ=255) ttttttATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAATCTTCTTCTCCGt > 1:4084480/1‑91 (MQ=255) ttttttATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAATCTTCTTCTCCGt < 1:3026394/91‑1 (MQ=255) tttttATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAATCTTCTTCTCCGTa < 1:2060046/91‑1 (MQ=255) tttATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAATCTTCTTCTCCGTAAt > 1:1941512/1‑91 (MQ=255) tataAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAaagtcatgactattttttataaaaaagataaataaatcaacggaaaacg < 1:3296190‑M2/91‑50 (MQ=255) tataAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAATCTTCTTCTCCGTAATTc < 1:3209375/91‑1 (MQ=255) ataAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAATCTTCTTCTCCGTAATTCg > 1:548159/1‑91 (MQ=255) ataAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAATCTTCTTCTCCGTAATTCg > 1:63828/1‑91 (MQ=255) ataAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAATCTTCTTCTCCGTAATTCg > 1:3997176/1‑91 (MQ=255) taAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAATCTTCTTCTCCGTAATTCgg > 1:414662/1‑91 (MQ=255) aaTA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAATCTTCTTCTCCGTAATTCGGCtttt > 1:3995361/1‑91 (MQ=255) a‑‑GTCATTACTTtacgtacgcgttgatgtatgtaagtaatgactattttttataaaaaagataaataaatcaacggaaaacgctttcaaatt > 1:2530086‑M1/1‑11 (MQ=255) | TATGTGTTATACTTTATGGAATTAGTATAGCATATTATATGAAATTTGAAAGCGTTTTCCGTTGATTTATTTATCTTTTTTATAAAAAATA‑‑GTCATTACTTACATACATCAACGCGTACGTAAAGTAATGACTTATTTATAGTGTAATATTAATCTTCTTCTCCGTAATTCGGCTTTTCAA > USA300TCH1516_ALE/1789540‑1789720 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |