BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	1830989 =	89 (0.910)	5 (0.050)	5/150	NT	5.8%	coding (131/1695 nt)	ezrA	Septation ring formation regulator EzrA
*	?	USA300TCH1516_ALE	1831014 =	79 (0.860)	5 (0.050)	5/150	NT	5.8%	coding (106/1695 nt)	ezrA	Septation ring formation regulator EzrA

Only 100 of 116 total aligned reads displayed.

ACGTTGTCCTTTTTCATTGCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCA  >  USA300TCH1516_ALE/1830899‑1831079

aCGTTGTCCTTTTTCATTGCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTa                                                                                            >  1:1928643/1‑91 (MQ=255)

 tttggcaataattgtgattatattgattgctgtaggtgtattattctatttacgttcaaataaacgacaaattattgaaaaagcaatcgaa                                                                                           >  1:3715547‑M1/90‑91 (MQ=255)

 cGTTGTCCTTTTTCATTGCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTaa                                                                                           >  1:985272/1‑91 (MQ=255)

 cGTTCTCCTTTTTCATTGCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTaa                                                                                           <  1:2605438/91‑1 (MQ=255)

  ttggcaataattgtgattatattgattgctgtaggtgtattattctatttacgttcaaataaacgacaaattattgaaaaagcaatcgAAc                                                                                          >  1:1593252‑M1/89‑91 (MQ=255)

  gTTGTCCTTTTTCATTGCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAAc                                                                                          >  1:1292136/1‑91 (MQ=255)

    tGTCCTTTTTCATTGCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGt                                                                                        <  1:3436656/91‑1 (MQ=255)

    tGTCCTTTTTCATTGCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGt                                                                                        <  1:3436546/91‑1 (MQ=255)

    tGTCCTTTTTCATTGCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGt                                                                                        >  1:1175880/1‑91 (MQ=255)

    ggcaataattgtgattatattgattgctgtaggtgtattattctatttacgttcaaataaacgacaaattattgaaaaagcaatcgAACGt                                                                                        >  1:2624007‑M1/87‑91 (MQ=255)

    ggcaataattgtgattatattgattgctgtaggtgtattattctatttacgttcaaataaacgacaaattattgaaaaagcaatcgAACGt                                                                                        <  1:365664‑M1/5‑1 (MQ=255)

    ggcaataattgtgattatattgattgctgtaggtgtattattctatttacgttcaaataaacgacaaattattgaaaaagcaatcgAACGt                                                                                        >  1:2628127‑M1/87‑91 (MQ=255)

       ccTTTTTCATTGCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGtctc                                                                                     <  1:442766/91‑1 (MQ=255)

           tttCATTGCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATATTTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAAtt                                                                                 <  1:3499720/91‑1 (MQ=255)

           tttCATTGCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAAtt                                                                                 <  1:3929690/91‑1 (MQ=255)

           tttCATTGCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAAtt                                                                                 <  1:270998/91‑1 (MQ=255)

           tttCATTGCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAAtt                                                                                 <  1:271096/91‑1 (MQ=255)

             tCATTGCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTc                                                                               >  1:92823/1‑91 (MQ=255)

             tCATTGCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTc                                                                               <  1:2471218/91‑1 (MQ=255)

             tCATTGCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTc                                                                               >  1:3108287/1‑91 (MQ=255)

             tCATTGCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTc                                                                               >  1:2478593/1‑91 (MQ=255)

             tCATTGCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTc                                                                               >  1:1069885/1‑91 (MQ=255)

              cATTGCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCa                                                                              >  1:2938670/1‑91 (MQ=255)

                  gCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCAtttt                                                                          >  1:1358462/1‑91 (MQ=255)

                   cATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCAttttt                                                                         <  1:795668/91‑1 (MQ=255)

                   cATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCAttttt                                                                         <  1:874038/91‑1 (MQ=255)

                   cATCGTATTTCGATTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCAttttt                                                                         >  1:3183337/1‑91 (MQ=255)

                     tCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTAc                                                                       >  1:3107950/1‑91 (MQ=255)

                        tgattgctgtaggtgtattattctatttacgttcaaataaacgacaaattattgaaaaagcaatcgAACGTCTCAATTTCATTTTTACGtt                                                                    >  1:1974835‑M1/67‑91 (MQ=255)

                         gattgctgtaggtgtattattctatttacgttcaaataaacgacaaattattgaaaaagcaatcgAACGTCTCAATTTCATTTTTACGTTc                                                                   >  1:3798570‑M1/66‑91 (MQ=255)

                         aTTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTc                                                                   <  1:195652/91‑1 (MQ=255)

                         aTTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTc                                                                   >  1:581986/1‑91 (MQ=255)

                          tttCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCg                                                                  <  1:3386824/91‑1 (MQ=255)

                           ttCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGa                                                                 <  1:265445/91‑1 (MQ=255)

                           ttCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGa                                                                 <  1:3892013/91‑1 (MQ=255)

                            tCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGAt                                                                <  1:1360159/91‑1 (MQ=255)

                            tCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGAt                                                                <  1:1360139/91‑1 (MQ=255)

                            tCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGAt                                                                >  1:1053990/1‑91 (MQ=255)

                              gTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTg                                                              >  1:1019130/1‑91 (MQ=255)

                              ctgtaggtgtattattctatttacgttcaaataaacgacaaattattgaaaaagcaatcgAACGTCTCAATTTCATTTTTACGTTCGATTg                                                              >  1:402158‑M1/61‑91 (MQ=255)

                               tttttGTTTCACCTTTTAAATTCAACTTAGATGATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGc                                                             <  1:3523497/91‑1 (MQ=255)

                                  ttGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCttt                                                          <  1:1341868/91‑1 (MQ=255)

                                    gTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCttttt                                                        >  1:2923614/1‑91 (MQ=255)

                                       tCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCttttttca                                                     <  1:1983529/91‑4 (MQ=255)

                                       tCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCaa                                                     <  1:836666/91‑1 (MQ=255)

                                       tCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCaa                                                     <  1:2929845/91‑1 (MQ=255)

                                       tCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCaa                                                     >  1:2668559/1‑91 (MQ=255)

                                        cACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCaat                                                    <  1:1670568/91‑1 (MQ=255)

                                        cACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCaat                                                    >  1:2785886/1‑91 (MQ=255)

                                            ttttAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAAtt                                                >  1:3069225/1‑91 (MQ=255)

                                            ttttAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAAtt                                                >  1:2924812/1‑91 (MQ=255)

                                               tAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGt                                             >  1:2137914/1‑91 (MQ=255)

                                               tAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGt                                             >  1:2138071/1‑91 (MQ=255)

                                                aaaTTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTc                                            >  1:2031243/1‑91 (MQ=255)

                                                 aaTTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCg                                           <  1:1161345/91‑1 (MQ=255)

                                                  aTTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGt                                          <  1:968992/91‑1 (MQ=255)

                                                   ttCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGtt                                         <  1:1022740/91‑1 (MQ=255)

                                                   ttCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGtt                                         <  1:3649047/91‑1 (MQ=255)

                                                   ttCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGtt                                         <  1:1937766/91‑1 (MQ=255)

                                                   ttCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGtt                                         <  1:1937685/91‑1 (MQ=255)

                                                     cAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTGAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTa                                       <  1:3299149/91‑1 (MQ=255)

                                                     cAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTa                                       >  1:2490307/1‑91 (MQ=255)

                                                     cAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTa                                       <  1:367774/91‑1 (MQ=255)

                                                     cAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTa                                       >  1:1820243/1‑91 (MQ=255)

                                                      aaCTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTAt                                      >  1:2161701/1‑91 (MQ=255)

                                                       aCTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTAtt                                     <  1:1020880/91‑1 (MQ=255)

                                                       aCTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTAtt                                     <  1:1324298/91‑1 (MQ=255)

                                                         ttAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTg                                   >  1:107045/1‑91 (MQ=255)

                                                         ttAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTg                                   <  1:2818356/91‑1 (MQ=255)

                                                          tAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGa                                  <  1:1521081/91‑1 (MQ=255)

                                                           aGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGaa                                 >  1:1778165/1‑91 (MQ=255)

                                                             aTAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACg                               <  1:3490591/91‑1 (MQ=255)

                                                             aTAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACg                               <  1:89100/91‑1 (MQ=255)

                                                                aTTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTaa                            >  1:814898/1‑91 (MQ=255)

                                                                  tgtgCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAAt                          <  1:1822979/91‑1 (MQ=255)

                                                                  gacaaattattgaaaaagcaatcgAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAAt                          >  1:2438991‑M1/25‑91 (MQ=255)

                                                                     gCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGa                       <  1:476119/91‑1 (MQ=255)

                                                                      cAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGaa                      >  1:1226614/1‑91 (MQ=255)

                                                                      cAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGaa                      >  1:3732496/1‑91 (MQ=255)

                                                                       aaGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGaat                     <  1:1008605/91‑1 (MQ=255)

                                                                          gTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGaataat                  <  1:3014355/91‑1 (MQ=255)

                                                                           ttttGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAataata                 <  1:96666/91‑1 (MQ=255)

                                                                               gATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATACTACAcc             <  1:3224277/91‑1 (MQ=255)

                                                                               gATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACAcc             >  1:1259528/1‑91 (MQ=255)

                                                                               gATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACAcc             <  1:1237614/91‑1 (MQ=255)

                                                                               gATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACAcc             >  1:2139296/1‑91 (MQ=255)

                                                                               gATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACAcc             >  1:2725855/1‑91 (MQ=255)

                                                                               gATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACAcc             >  1:3132835/1‑91 (MQ=255)

                                                                                aTCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCt            <  1:2173026/91‑1 (MQ=255)

                                                                                aTCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTGTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCt            <  1:4139147/91‑1 (MQ=255)

                                                                                 tCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTa           >  1:700002/1‑91 (MQ=255)

                                                                                   aaaaGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACa         <  1:939916/91‑1 (MQ=255)

                                                                                    aaaGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAg        >  1:545538/1‑91 (MQ=255)

                                                                                      aGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGca      >  1:1980875/1‑91 (MQ=255)

                                                                                       ggTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGcaa     <  1:970624/91‑1 (MQ=255)

                                                                                        gTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGcaat    <  1:3697969/91‑1 (MQ=255)

                                                                                         tAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGcaatc   <  1:3042236/91‑1 (MQ=255)

                                                                                         tAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGcaatc   <  1:3041850/91‑1 (MQ=255)

                                                                                          AACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGcaatca  >  1:1785816‑M1/1‑91 (MQ=255)

                                                                                          AACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGcaatca  <  1:4112509‑M1/91‑1 (MQ=255)

ACGTTGTCCTTTTTCATTGCATCGTATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCA  >  USA300TCH1516_ALE/1830899‑1831079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.