BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	1830989 =	89 (0.910)	5 (0.050)	5/150	NT	5.8%	coding (131/1695 nt)	ezrA	Septation ring formation regulator EzrA
*	?	USA300TCH1516_ALE	1831014 =	79 (0.860)	5 (0.050)	5/150	NT	5.8%	coding (106/1695 nt)	ezrA	Septation ring formation regulator EzrA

Only 100 of 115 total aligned reads displayed.

ATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATCACAATTATTGCCAAAAT  >  USA300TCH1516_ALE/1830924‑1831104

gattgctgtaggtgtattattctatttacgttcaaataaacgacaaattattgaaaaagcaatcgAACGTCTCAATTTCATTTTTACGTTc                                                                                            >  1:3798570‑M1/66‑91 (MQ=255)

aTTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTc                                                                                            >  1:581986/1‑91 (MQ=255)

aTTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTc                                                                                            <  1:195652/91‑1 (MQ=255)

aTTTCGTTTTTGATTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTc                                                                                            >  1:3179936/1‑91 (MQ=255)

 tttCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCg                                                                                           <  1:3386824/91‑1 (MQ=255)

  ttCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGa                                                                                          <  1:3892013/91‑1 (MQ=255)

  ttCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGa                                                                                          <  1:265445/91‑1 (MQ=255)

   tCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGAt                                                                                         <  1:1360159/91‑1 (MQ=255)

   tCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGAt                                                                                         >  1:1053990/1‑91 (MQ=255)

     gTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTg                                                                                       >  1:1019130/1‑91 (MQ=255)

     ctgtaggtgtattattctatttacgttcaaataaacgacaaattattgaaaaagcaatcgAACGTCTCAATTTCATTTTTACGTTCGATTg                                                                                       >  1:402158‑M1/61‑91 (MQ=255)

      tttttGTTTCACCTTTTAAATTCAACTTAGATGATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGc                                                                                      <  1:3523497/91‑1 (MQ=255)

         ttGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCttt                                                                                   <  1:1341868/91‑1 (MQ=255)

              tCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCttttttca                                                                              <  1:1983529/91‑4 (MQ=255)

              tCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCttttttca                                                                              <  1:1983595/91‑4 (MQ=255)

              tCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCaa                                                                              <  1:2426938/91‑1 (MQ=255)

              tCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCaa                                                                              >  1:2668559/1‑91 (MQ=255)

              tCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCaa                                                                              <  1:2929845/91‑1 (MQ=255)

               cACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCaat                                                                             >  1:2785886/1‑91 (MQ=255)

                   ttttAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAAtt                                                                         >  1:2924812/1‑91 (MQ=255)

                   ttttAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAAtt                                                                         <  1:684225/91‑1 (MQ=255)

                      tAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGt                                                                      >  1:2138071/1‑91 (MQ=255)

                      tAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGt                                                                      >  1:2137914/1‑91 (MQ=255)

                       atttacgttcaaataaacgacaaattattgaaaaagcaatcgaacgtaaaaatgaaattgagacgttCGATTGCTTTTTCAATAATTTGTc                                                                     >  1:2438991‑M2/68‑91 (MQ=255)

                       aaaTTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTc                                                                     >  1:2031243/1‑91 (MQ=255)

                         aTTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGt                                                                   <  1:968992/91‑1 (MQ=255)

                          ttCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGtt                                                                  <  1:1022740/91‑1 (MQ=255)

                          ttCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGtt                                                                  <  1:3649047/91‑1 (MQ=255)

                          ttCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGtt                                                                  <  1:1937685/91‑1 (MQ=255)

                          ttCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGtt                                                                  <  1:1937766/91‑1 (MQ=255)

                            cAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTGAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTa                                                                <  1:3299149/91‑1 (MQ=255)

                            cAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTa                                                                <  1:367774/91‑1 (MQ=255)

                            cAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTa                                                                >  1:1820243/1‑91 (MQ=255)

                            cAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTa                                                                >  1:2490307/1‑91 (MQ=255)

                             aaCTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTAt                                                               >  1:2161701/1‑91 (MQ=255)

                              aCTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTAtt                                                              <  1:1020880/91‑1 (MQ=255)

                              aCTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTAtt                                                              <  1:1324298/91‑1 (MQ=255)

                                ttAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTg                                                            <  1:2818356/91‑1 (MQ=255)

                                ttAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTg                                                            >  1:107045/1‑91 (MQ=255)

                                 tAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGa                                                           <  1:1521081/91‑1 (MQ=255)

                                  aGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGaa                                                          >  1:1778165/1‑91 (MQ=255)

                                   gATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAAc                                                         >  1:3025404/1‑91 (MQ=255)

                                    aTAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACg                                                        <  1:89100/91‑1 (MQ=255)

                                       aTTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTaa                                                     >  1:814898/1‑91 (MQ=255)

                                         tgtgCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAAt                                                   <  1:1822979/91‑1 (MQ=255)

                                         gacaaattattgaaaaagcaatcgAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAAt                                                   >  1:2438991‑M1/25‑91 (MQ=255)

                                           tgCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAg                                                 <  1:2624374/91‑1 (MQ=255)

                                             cAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGaa                                               >  1:3732496/1‑91 (MQ=255)

                                             cAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGaa                                               >  1:1226614/1‑91 (MQ=255)

                                              aaGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGaat                                              <  1:1008605/91‑1 (MQ=255)

                                                 gTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGaataat                                           <  1:3014355/91‑1 (MQ=255)

                                                  ttttGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAataata                                          <  1:96666/91‑1 (MQ=255)

                                                      gATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATACTACAcc                                      <  1:3224277/91‑1 (MQ=255)

                                                      gATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACAcc                                      >  1:3132835/1‑91 (MQ=255)

                                                      gATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACAcc                                      >  1:2725855/1‑91 (MQ=255)

                                                      gATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACAcc                                      <  1:1237614/91‑1 (MQ=255)

                                                      gATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACAcc                                      >  1:1259528/1‑91 (MQ=255)

                                                      gATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACAcc                                      >  1:2139296/1‑91 (MQ=255)

                                                       aTCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCt                                     <  1:2173026/91‑1 (MQ=255)

                                                       aTCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTGTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCt                                     <  1:4139147/91‑1 (MQ=255)

                                                        tCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTa                                    >  1:700002/1‑91 (MQ=255)

                                                        tCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTa                                    <  1:4022703/91‑1 (MQ=255)

                                                          aaaaGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACa                                  <  1:939916/91‑1 (MQ=255)

                                                          aaaaGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACa                                  <  1:276404/91‑1 (MQ=255)

                                                           caatcgaacgtaaaaatgaaattgagacgttCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAg                                 >  1:402158‑M2/32‑91 (MQ=255)

                                                           aaaGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAg                                 >  1:545538/1‑91 (MQ=255)

                                                             aGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGca                               >  1:1980875/1‑91 (MQ=255)

                                                              ggTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGcaa                              <  1:970624/91‑1 (MQ=255)

                                                               gTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGcaat                             <  1:3697969/91‑1 (MQ=255)

                                                                tAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGcaatc                            <  1:3041850/91‑1 (MQ=255)

                                                                tAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGcaatc                            <  1:3042236/91‑1 (MQ=255)

                                                                gaacgtaaaaatgaaattgagacgttCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGcaatc                            >  1:3798570‑M2/27‑91 (MQ=255)

                                                                 aacgtaaaaatgaaattgagacgttCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGcaatca                           >  1:1974835‑M2/26‑91 (MQ=255)

                                                                 AACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGcaatca                           >  1:1785816‑M1/1‑91 (MQ=255)

                                                                 AACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGcaatca                           <  1:4112509‑M1/91‑1 (MQ=255)

                                                                     taaaaatgaaattgagacgttCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAatat                       >  1:1312459‑M2/22‑91 (MQ=255)

                                                                     TCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAatat                       >  1:32391‑M1/1‑91 (MQ=255)

                                                                     TCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAatat                       >  1:3926628‑M1/1‑91 (MQ=255)

                                                                      ctcAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAAtata                      <  1:1802672/91‑1 (MQ=255)

                                                                         aaTTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATc                   <  1:234210/91‑1 (MQ=255)

                                                                          aTTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATca                  <  1:1697998/91‑1 (MQ=255)

                                                                          aTTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATca                  <  1:341218/91‑1 (MQ=255)

                                                                           tttCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATcac                 <  1:884498/91‑1 (MQ=255)

                                                                           tttCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATcac                 <  1:1053716/91‑1 (MQ=255)

                                                                              cATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATCACAat              <  1:1789333/91‑1 (MQ=255)

                                                                              cATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATCACAat              <  1:1404486/91‑1 (MQ=255)

                                                                               aTTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATCACAatt             >  1:1448753/1‑91 (MQ=255)

                                                                                 ttttACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATCACAattat           >  1:155047/1‑91 (MQ=255)

                                                                                  tttACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATCACAattatt          >  1:3633007/1‑91 (MQ=255)

                                                                                  tttACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATCACAattatt          >  1:548889/1‑91 (MQ=255)

                                                                                  tttACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATCACAattatt          >  1:3841152/1‑91 (MQ=255)

                                                                                   ttACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATCACAATTATTg         <  1:12377/91‑1 (MQ=255)

                                                                                    tACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATAGACCTACAGCAATCAATATAATCACAATTATTGc        >  1:3683539/1‑91 (MQ=255)

                                                                                    tACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATCACAATTATTGc        <  1:672487/91‑1 (MQ=255)

                                                                                    tACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATCACAATTATTGc        <  1:3544039/91‑1 (MQ=255)

                                                                                     acgttCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATCACAATTATTGcc       <  1:365664‑M2/86‑1 (MQ=255)

                                                                                     acgttCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATCACAATTATTGcc       >  1:2624007‑M2/6‑91 (MQ=255)

                                                                                       gttCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATCACAATTATTGCCaa     >  1:1593252‑M2/4‑91 (MQ=255)

                                                                                        ttCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATCACAATTATTGCCaaa    >  1:3715547‑M2/3‑91 (MQ=255)

                                                                                          cGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATCACAATTATTGCCAAAAt  >  1:2645053/1‑91 (MQ=255)

ATTTCGTTTTTGTTTCACCTTTTAAATTCAACTTAGATAATTGTGCAAGGTTTTGATCAAAAGGTAACGTCTCAATTTCATTTTTACGTTCGATTGCTTTTTCAATAATTTGTCGTTTATTTGAACGTAAATAGAATAATACACCTACAGCAATCAATATAATCACAATTATTGCCAAAAT  >  USA300TCH1516_ALE/1830924‑1831104

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.