| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1868935 = | 112 (1.140) | 17 (0.190) | 11/142 | NT | 16.5% | intergenic (‑342/+128) | ytnP/trmB | putative quorum‑quenching lactonase YtnP/tRNA (guanine‑N(7)‑)‑methyltransferase |
| ? | USA300TCH1516_ALE | 1868982 = | 73 (0.840) | intergenic (‑389/+81) | ytnP/trmB | putative quorum‑quenching lactonase YtnP/tRNA (guanine‑N(7)‑)‑methyltransferase | |||||
Only 100 of 146 total aligned reads displayed.
TTGTTCATAGGCGCATTATCTCCTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAAC > USA300TCH1516_ALE/1868845‑1869025 | caaaaatagagcacttatgagggtatgtacacatacaatcataagtgttttttcgtactataatggttctatagataaaggttctataata < 1:4081153‑M1/1‑1 (MQ=255) tGTTCATAGGCGCATTATCTCCTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCaaaaa < 1:2424403/91‑1 (MQ=255) ttCATAGGCGCATTATCTCCTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAAt > 1:3802705/1‑91 (MQ=255) ttCATAGGCGCATTATCTCCTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAAt < 1:690421/91‑1 (MQ=255) cATAGGCGCATTATCTCCTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCg > 1:495311/1‑91 (MQ=255) tAGGCGCATTATCTCCTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGa > 1:164113/1‑91 (MQ=255) tAGGCGCATTATCTCCTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGa < 1:3012798/91‑1 (MQ=255) agagcacttatgagggtatgtacacatacaatcataagtgttttttcgtactataatggttctatagataaaggttctataatAAATCGGa < 1:3575741‑M1/8‑1 (MQ=255) agagcacttatgagggtatgtacacatacaatcataagtgttttttcgtactataatggttctatagataaaggttctataatAAATCGGa > 1:1511767‑M1/84‑91 (MQ=255) gagcacttatgagggtatgtacacatacaatcataagtgttttttcgtactataatggttctatagataacggttctataatAAATCGGAc < 1:861391‑M1/9‑1 (MQ=255) gagcacttatgagggtatgtacacatacaatcataagtgttttttcgtactataatggttctatagataaaggttctataatAAATCTGAc < 1:3343342‑M1/9‑1 (MQ=255) aGGCGCATTATCTCCTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGAc < 1:3153946/91‑1 (MQ=255) aGGCGCATTATCTCCTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGAc < 1:1672803/91‑1 (MQ=255) aGGCGCATTATCTCCTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGAc < 1:1672890/91‑1 (MQ=255) cATTATCTCCTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATg < 1:3421939/91‑1 (MQ=255) aTTATCTCCTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGa > 1:385911/1‑91 (MQ=255) ttATCTCCTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGaa > 1:1842923/1‑91 (MQ=255) aTCTCCTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGaaaa > 1:3541788/1‑91 (MQ=255) aTCTCCTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGaaaa > 1:1195194/1‑91 (MQ=255) ctcCTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTCTATTCAAAATCAAAAAATCGGACAGATGAAAAGt > 1:3877889/1‑91 (MQ=255) ctcCTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGt > 1:2117742/1‑91 (MQ=255) ctcCTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGt > 1:1058229/1‑91 (MQ=255) ctcCTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGt < 1:944087/91‑1 (MQ=255) ctcCTTTAGTCATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTCTTATATTAAAAATCAAAAAATCGGACAGATGAAAAGt > 1:3870671/1‑91 (MQ=255) ccTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTa > 1:2843957/1‑91 (MQ=255) tttAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTaaa < 1:3044721/91‑1 (MQ=255) ttAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTTAAAATCAAAAAATCGGACAGATGAAAAGTTaaaa > 1:3101582/1‑91 (MQ=255) tAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTaaaaa < 1:1465883/91‑1 (MQ=255) tATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACttt < 1:1856802/91‑1 (MQ=255) tATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACttt > 1:1406054/1‑91 (MQ=255) tATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACttt < 1:2751624/91‑1 (MQ=255) catacaatcataagtgttttttcgtactataatggttctatagataaatgttctataatAAATCGGACAGATGAAAAGTTAAAAACttttt > 1:127035‑M1/60‑91 (MQ=255) ttGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTc > 1:545162/1‑91 (MQ=255) atacaatcataagtgttttttcgtactataatggttctatagataaaggttctataatAAATCGGACAGATGAAAAGTTAAAAACTTTTTc > 1:2903551‑M1/59‑91 (MQ=255) atacaatcataagtgttttttcgtactataatggttctatagataaaggttctataatAAATCGGACAGATGAAAAGTTAAAAACTTTTTc > 1:835970‑M1/59‑91 (MQ=255) tacaatcataagtgttttttcgtactataatggttctatagataaaggttctataatAAATCGGACAGATGAAAAGTTAAAAACTTTTTcc > 1:53732‑M1/58‑91 (MQ=255) gTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCa < 1:1340442/91‑1 (MQ=255) acaatcataagtgttttttcgtactataatggttctatagataaaggttctataatAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCa > 1:2145892‑M1/57‑91 (MQ=255) tttAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCAt > 1:2448703/1‑91 (MQ=255) caatcataagtgttttttcgtactataatggttctatagataaaggttctataatAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCAt > 1:2828583‑M1/56‑91 (MQ=255) caatcataagtgttttttcgtactataatggttctatagataaaggttctataatAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCAt > 1:23295‑M1/56‑91 (MQ=255) ttAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATc < 1:3228763/91‑1 (MQ=255) ttAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATc < 1:1880386/91‑1 (MQ=255) ttAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATc < 1:1880336/91‑1 (MQ=255) ttAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATc < 1:1880313/91‑1 (MQ=255) ttAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTCTCCATc < 1:3228383/91‑1 (MQ=255) aatcataagtgttttttcgtactataatggttctatagataaaggttctataatAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATc > 1:112161‑M1/55‑91 (MQ=255) tcataagtgttttttcgtactataatggttctatagataaaggttctataatAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCCTCAg > 1:3279502‑M1/53‑91 (MQ=255) cataagtgttttttcgtactataatggttctatagataaaggttctataatAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGt > 1:1864011‑M1/52‑91 (MQ=255) cataagtgttttttcgtactataatggttctatagataaaggttctataatAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGt > 1:36777‑M1/52‑91 (MQ=255) tCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTc < 1:2780946/91‑1 (MQ=255) aCTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCg < 1:2606885/91‑1 (MQ=255) aCTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCg < 1:2606592/91‑1 (MQ=255) aCTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCg > 1:592613/1‑91 (MQ=255) aCTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCg < 1:2091379/91‑1 (MQ=255) cTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGa < 1:2833600/91‑1 (MQ=255) ttAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGAttt < 1:3670647/91‑1 (MQ=255) ttAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGAttt < 1:3670722/91‑1 (MQ=255) aaTTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATttat < 1:3963800/91‑1 (MQ=255) aTTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATttatt > 1:1259125/1‑91 (MQ=255) aTTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATttatt > 1:1021231/1‑91 (MQ=255) tataGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTtattat > 1:1473070/1‑91 (MQ=255) tataGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTtattat < 1:1758128/91‑1 (MQ=255) ataGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATtata > 1:53573/1‑91 (MQ=255) ataGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATtata < 1:1218643/91‑1 (MQ=255) taGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAg < 1:43992/91‑1 (MQ=255) taGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAg > 1:4101855/1‑91 (MQ=255) taGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAg < 1:2327157/91‑1 (MQ=255) cgtactataatggttctatagataaaggttctataatAAATCGGACAGAGGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAg > 1:3597171‑M1/38‑91 (MQ=255) gtactataatggttctatagataaaggttctataatAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCTATTTATTATAGa > 1:3199794‑M1/37‑91 (MQ=255) agagATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGa > 1:2684669/1‑91 (MQ=255) agagATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGa > 1:1029714/1‑91 (MQ=255) agaTAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAAc < 1:923427/91‑1 (MQ=255) gaTAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAAcc < 1:3085240/91‑1 (MQ=255) aTAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCt > 1:3558763/1‑91 (MQ=255) aTAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCt < 1:3969045/91‑1 (MQ=255) aTAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCt < 1:1124342/91‑1 (MQ=255) aTAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCt < 1:267114/91‑1 (MQ=255) aTTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTa < 1:2460918/91‑1 (MQ=255) aTTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTa > 1:1608725/1‑91 (MQ=255) gcgcTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCt > 1:248546/1‑91 (MQ=255) ttttATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAAc < 1:35107/91‑1 (MQ=255) tttATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAAcc < 1:2553920/91‑1 (MQ=255) tttATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAAcc < 1:3140279/91‑1 (MQ=255) tttATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAAcc < 1:339911/91‑1 (MQ=255) tataTTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCAt > 1:1889781/1‑91 (MQ=255) atatTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCAtt < 1:2200161/91‑1 (MQ=255) atTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATtat < 1:1646164/91‑1 (MQ=255) tcaaaatcaaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAg < 1:3561810/91‑1 (MQ=255) caaaatcaaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGt < 1:2040609/91‑1 (MQ=255) caaaatcaaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGt > 1:2465958/1‑91 (MQ=255) aaatcaaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTAc < 1:1363578/91‑1 (MQ=255) aaatcaaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTAc > 1:703036/1‑91 (MQ=255) atcaaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGa < 1:1715970/91‑1 (MQ=255) atcaaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGa < 1:1724966/91‑1 (MQ=255) atcaaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGa > 1:3838912/1‑91 (MQ=255) atcaaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGa < 1:3794042/91‑1 (MQ=255) caaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGaaa > 1:2905168/1‑91 (MQ=255) aaaaTCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGaaaaaa > 1:2443428/1‑91 (MQ=255) AAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTacgaaaacac < 1:4091811‑M1/91‑4 (MQ=255) | TTGTTCATAGGCGCATTATCTCCTTTAGTTATTTGTTTAGTCACTTTTAATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAAC > USA300TCH1516_ALE/1868845‑1869025 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |