| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1868935 = | 112 (1.140) | 17 (0.190) | 11/142 | NT | 16.5% | intergenic (‑342/+128) | ytnP/trmB | putative quorum‑quenching lactonase YtnP/tRNA (guanine‑N(7)‑)‑methyltransferase |
| ? | USA300TCH1516_ALE | 1868982 = | 73 (0.840) | intergenic (‑389/+81) | ytnP/trmB | putative quorum‑quenching lactonase YtnP/tRNA (guanine‑N(7)‑)‑methyltransferase | |||||
Only 100 of 122 total aligned reads displayed.
AATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTATGTGTACATACCCTCATAAGTGCTCTATTTTTG > USA300TCH1516_ALE/1868893‑1869071 | aaTTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATttat < 1:3963800/91‑1 (MQ=255) aTTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATttatt > 1:1021231/1‑91 (MQ=255) tataGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTtattat < 1:1758128/91‑1 (MQ=255) tataGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTtattat < 1:1275388/91‑1 (MQ=255) tataGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTtattat > 1:1473070/1‑91 (MQ=255) ataGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATtata > 1:1665194/1‑91 (MQ=255) ataGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATtata < 1:1218643/91‑1 (MQ=255) ataGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATtata > 1:53573/1‑91 (MQ=255) taGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAg > 1:4101855/1‑91 (MQ=255) taGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAg < 1:2327157/91‑1 (MQ=255) taGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAg < 1:43992/91‑1 (MQ=255) taGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAg > 1:864980/1‑91 (MQ=255) cgtactataatggttctatagataaaggttctataatAAATCGGACAGAGGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAg > 1:3597171‑M1/38‑91 (MQ=255) gtactataatggttctatagataaaggttctataatAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCTATTTATTATAGa > 1:3199794‑M1/37‑91 (MQ=255) agagATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGa > 1:2684669/1‑91 (MQ=255) agagATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGa > 1:1029714/1‑91 (MQ=255) gagaTAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGaa > 1:683067/1‑91 (MQ=255) agaTAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAAc < 1:923427/91‑1 (MQ=255) gaTAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAAcc < 1:3085240/91‑1 (MQ=255) gaTAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAAcc < 1:3084999/91‑1 (MQ=255) aTAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCt < 1:1124342/91‑1 (MQ=255) aTAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCt < 1:3969045/91‑1 (MQ=255) aTAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCt > 1:3558763/1‑91 (MQ=255) tAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCtt < 1:2741880/91‑1 (MQ=255) aTTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTa > 1:1608725/1‑91 (MQ=255) aTTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTa < 1:2460918/91‑1 (MQ=255) tGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATc > 1:735779/1‑91 (MQ=255) ttttttATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGa < 1:3389872/91‑1 (MQ=255) tttttATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGaa < 1:3456767/91‑1 (MQ=255) ttttATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAAc < 1:35107/91‑1 (MQ=255) tttATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAAcc < 1:3139995/91‑1 (MQ=255) tttATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAAcc < 1:3140279/91‑1 (MQ=255) tttATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAAcc < 1:339911/91‑1 (MQ=255) tttATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAAcc < 1:2553920/91‑1 (MQ=255) tataTTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCAt > 1:1889612/1‑91 (MQ=255) tataTTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCAt > 1:1889781/1‑91 (MQ=255) atatTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCAtt < 1:2200161/91‑1 (MQ=255) atTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATtat < 1:1646164/91‑1 (MQ=255) atTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATtat > 1:533702/1‑91 (MQ=255) ttCAAAATCGAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAATCATtata > 1:2086679/1‑91 (MQ=255) tcaaaatcaaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAg < 1:3557381/91‑1 (MQ=255) caaaatcaaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGt > 1:2465958/1‑91 (MQ=255) caaaatcaaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGt < 1:2040609/91‑1 (MQ=255) tctataataaataggactgatggaaaaagtttttaacttttcatctgtccgatttATTATAGAACCTTTATCTATAGAACCATTATAGTAc > 1:3199794‑M2/56‑91 (MQ=255) aaatcaaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTAc < 1:1363578/91‑1 (MQ=255) aaatcaaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTAc > 1:246671/1‑91 (MQ=255) aaatcaaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTAc > 1:703036/1‑91 (MQ=255) aaatcaaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTAc < 1:3655218/91‑1 (MQ=255) ctataataaatcggactgatggaaaaagtttttaacttttcctctgtccgatttATTATAGAACCTTTATCTATAGAACCATTATAGTACg > 1:3597171‑M2/55‑91 (MQ=255) atcaaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGa > 1:3838912/1‑91 (MQ=255) atcaaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGa < 1:1715970/91‑1 (MQ=255) atcaaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGa < 1:1724966/91‑1 (MQ=255) caaaaAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGaaa > 1:2905168/1‑91 (MQ=255) aaaaaaTCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGaaaa > 1:3923737/1‑91 (MQ=255) aaaaTCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGaaaaaa > 1:2443428/1‑91 (MQ=255) AAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTacgaaaacac < 1:4091811‑M1/91‑4 (MQ=255) AAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAac < 1:2620994‑M1/91‑1 (MQ=255) AATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAaca > 1:2157823‑M1/1‑91 (MQ=255) AATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAaca < 1:387427‑M1/91‑1 (MQ=255) AATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAaca < 1:386546‑M1/91‑1 (MQ=255) AATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGAGTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAaca > 1:4138995‑M1/1‑91 (MQ=255) cggactgatggagaaagtttttaacttttcatctgtccgatttATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACtt > 1:3175043‑M2/44‑91 (MQ=255) cggactgatggaaaaagtttttaacttttcatctgtccgatttATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACtt > 1:3859637‑M2/44‑91 (MQ=255) GGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTa > 1:2830920‑M1/1‑91 (MQ=255) GACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTAt > 1:16131‑M1/1‑91 (MQ=255) actgatggaaaaagtttttaacttttcatctgtccgatttATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATg > 1:36777‑M2/41‑91 (MQ=255) ACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATg > 1:3718726‑M1/1‑91 (MQ=255) ACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATg < 1:3906585‑M1/91‑1 (MQ=255) ctgagggaaaaagtttttaacttttcatctgtccgatttATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGa > 1:3279502‑M2/40‑91 (MQ=255) CAGATGACAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGa > 1:2075301‑M1/1‑91 (MQ=255) CAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGa < 1:401020‑M1/91‑1 (MQ=255) aGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGAt < 1:3256339/91‑1 (MQ=255) gatggaaaaagtttttaacttttcatctgtccgatttATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGAtt > 1:112161‑M2/38‑91 (MQ=255) gatggaaaaagtttttaacttttcatctgtccgatttATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGAtt > 1:136604‑M2/38‑91 (MQ=255) atggaaaaagtttttaacttttcatctgtccgatttATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTg > 1:2828583‑M2/37‑91 (MQ=255) tggaaaaagtttttaacttttcatctgtccgatttATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGt > 1:2145892‑M2/36‑91 (MQ=255) ggaaaaagtttttaacttttcatctgtccgatttATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTa > 1:53732‑M2/35‑91 (MQ=255) gAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTa < 1:1259242/91‑1 (MQ=255) gaaaaagtttttaacttttcatctgtccgatttATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTAt > 1:835970‑M2/34‑91 (MQ=255) gaaaaagtttttaacttttcatctgtccgatttATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTAt > 1:374302‑M2/34‑91 (MQ=255) gaaaaagtttttaacttttcatctgtccgatttATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTAt > 1:2903551‑M2/34‑91 (MQ=255) aaaaagtttttaacttttcatctgtccgatttATTATAGAACATTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTAtg > 1:127035‑M2/33‑91 (MQ=255) aaGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTAtgt < 1:2354069/91‑1 (MQ=255) tAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTATGTGTAc > 1:746263/1‑91 (MQ=255) tttaaCTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTATGTGTACa > 1:3796186/4‑91 (MQ=255) aaaCTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTATGTGTACATa < 1:1472442/91‑1 (MQ=255) aaaCTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTATGTGTACATa > 1:128006/1‑91 (MQ=255) aaaCTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTATGTGTACATa > 1:127965/1‑91 (MQ=255) aaCTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTATGTGTACATAc > 1:2837756/1‑91 (MQ=255) ttttCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTATGTGTACATACCCTc < 1:1816525/91‑1 (MQ=255) ttttCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTATGTGTACATACCCTc > 1:3785054/1‑91 (MQ=255) tCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTATGTGTACATACCCTCATa < 1:713777/91‑1 (MQ=255) ccATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTATGTGTACATACCCTCATaa > 1:2580988/1‑91 (MQ=255) gtccgatttATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTATGTGTACATACCCTCATAAGTGctc > 1:3563015‑M2/10‑91 (MQ=255) gtccgatttATTATAGAACCGTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTATGTGTACATACCCTCATAAGTGctc < 1:861391‑M2/82‑1 (MQ=255) gtcagatttATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTATGTGTACATACCCTCATAAGTGctc < 1:3343342‑M2/82‑1 (MQ=255) tccgatttATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTATGTGTACATACCCTCATAAGTGctct > 1:1511767‑M2/9‑91 (MQ=255) tccgatttATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTATGTGTACATACCCTCATAAGTGctct < 1:3575741‑M2/83‑1 (MQ=255) ttATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTATGTGTACATACCCTCATAAGTGCTCTAttttt > 1:2600777‑M2/3‑91 (MQ=255) tATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTATGTGTACATACCCTCATAAGTGCTCTATTTTTg < 1:4081153‑M2/90‑1 (MQ=255) | AATTATAGAGATAATTGCGCTTTTTTTATATTCAAAATCAAAAAATCGGACAGATGAAAAGTTAAAAACTTTTTCCATCAGTCCGATTTATTATAGAACCTTTATCTATAGAACCATTATAGTACGAAAAAACACTTATGATTGTATGTGTACATACCCTCATAAGTGCTCTATTTTTG > USA300TCH1516_ALE/1868893‑1869071 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |