| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2215759 | 72 (0.730) | 4 (0.050) | 4/140 | NT | 5.7% | intergenic (‑51/+335) | tenA/sceD | Aminopyrimidine aminohydrolase/putative transglycosylase SceD |
| ? | USA300TCH1516_ALE | = 2215797 | 69 (0.800) | intergenic (‑89/+297) | tenA/sceD | Aminopyrimidine aminohydrolase/putative transglycosylase SceD | |||||
Only 100 of 132 total aligned reads displayed.
TTGGCTTTGCAGCTTGGTACAATTTTTGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAGGTCATAAGGGTCTGAACA > USA300TCH1516_ALE/2215669‑2215849 | ttGGCTTTGCAGCTTGGTACAATTTTTGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAGAGTAGTT > 1:2088252‑M1/1‑91 (MQ=255)gaactactaggggagcctaatgatatggctgagatgaattgttcagacccttatgacctgatttggttagtaccaacgtagGAAAGTAGtt < 1:3263440‑M1/10‑1 (MQ=255) ggCTTTGCAGCTTGGTACAATTTTTGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTg < 1:4123798/91‑1 (MQ=255) ggCTTTGCAGCTTGGTACAATTTTTGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTg > 1:2443627/1‑91 (MQ=255) cTTTGCAGCTTGGTACAATTTTTGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGAt > 1:3844449/1‑91 (MQ=255) tttGCAGCTTGGTACAATTTTTGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATg > 1:414335/1‑91 (MQ=255) tttGCAGCTTGGTACAATTTTTGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATg < 1:2326910/91‑1 (MQ=255) ttGCAGCTTGGTACAATTTTTGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATgg < 1:2788327/91‑1 (MQ=255) ttGGTACAATTTTTGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGtt > 1:857983/1‑91 (MQ=255) tGGTACAATTTTTGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTg > 1:623996/1‑91 (MQ=255) tGGTACAATTTTTGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTg < 1:93953/91‑1 (MQ=255) tGGTACAATTTTTGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTg > 1:2761022/1‑91 (MQ=255) tGGTACAATTTTTGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTg < 1:94137/91‑1 (MQ=255) tGGTACAATTTTTGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTCGATGGCAATGTTg > 1:4152539/1‑91 (MQ=255) ggTACAATTTTTGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGc < 1:1334490/91‑1 (MQ=255) gTACAATTTTTGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCt > 1:1104197/1‑91 (MQ=255) tACAATTTTTGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCta < 1:3984620/91‑1 (MQ=255) aaTTTTTGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATAc < 1:3157639/91‑1 (MQ=255) aTTTTTGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACt < 1:657750/91‑1 (MQ=255) ttttGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAg < 1:3077145/91‑1 (MQ=255) tttGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCATCATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGc < 1:3496941/91‑1 (MQ=255) ttGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAACAACTACTTCCAGCATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGcc < 1:273683/91‑1 (MQ=255) ttGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGcc < 1:2708211/91‑1 (MQ=255) ttGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGcc < 1:1980053/91‑1 (MQ=255) tgtgAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGccc > 1:1581016/1‑91 (MQ=255) tgtgAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGccc > 1:1370477/1‑91 (MQ=255) gtgAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGcccc > 1:1706455/1‑91 (MQ=255) gAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCAt > 1:1886054/1‑91 (MQ=255) gAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCAt < 1:2206098/91‑1 (MQ=255) gAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCAt > 1:1049599/1‑91 (MQ=255) aaaaTTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATc < 1:179933/91‑1 (MQ=255) tCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTc < 1:1710388/91‑1 (MQ=255) gaattgttcagacccttatgacctgatttggttagtaccaacgtagGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTc < 1:1506363‑M1/45‑1 (MQ=255) ccATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCa > 1:1850419/1‑91 (MQ=255) cATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCaa > 1:2749854/1‑91 (MQ=255) cATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCaa > 1:2710428/1‑91 (MQ=255) cATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCaa > 1:2588392/1‑91 (MQ=255) ttGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATa < 1:2348133‑M2/91‑2 (MQ=255) ttGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATa < 1:3094346‑M2/91‑2 (MQ=255) gTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATaac > 1:3378590‑M2/1‑88 (MQ=255) tcagacccttatgacctgatttggttagtaccaacgtagGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAact > 1:3908435‑M1/40‑91 (MQ=255) tAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTattgaagtgatggggctagtatagcaacattgccatcaaact < 1:1895553‑M1/91‑43 (MQ=255) tAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATaact > 1:847076‑M2/1‑87 (MQ=255) cagacccttatgacctgatttggttagtaccaacgtagGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAacta > 1:1184131‑M1/39‑91 (MQ=255) aaaaaaTCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTattgaagtgatggggctagtatagcaacattgccatcaaacta < 1:563480‑M1/91‑44 (MQ=255) aaaaTCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTattgaagtgatggggctagtatagcaacattgccatcaaactact < 1:2177659‑M1/91‑46 (MQ=255) aaaaTCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATaactact > 1:768279‑M2/1‑84 (MQ=255) aaTCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTattgaagtgatggggctagtatagcaacattgccatcaaactacttt < 1:146718‑M1/91‑48 (MQ=255) aaTCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATaactacttt > 1:2518997‑M2/1‑82 (MQ=255) aaTCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATaactacttt < 1:97109‑M2/91‑10 (MQ=255) aTCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATaactactttc < 1:3142661‑M2/91‑11 (MQ=255) aTCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATaactactttc > 1:117652‑M2/1‑81 (MQ=255) tcctccCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTcc < 1:3418641/91‑1 (MQ=255) tcctccCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTcc < 1:170969/91‑1 (MQ=255) cctccCTAAATAAAAAAACTACTTCCAACATGAAAGTCGTTTGATGGCAATCTTGCTATACTAGCACCATCACTTCAATAACTACCTTCCt > 1:3859289/1‑91 (MQ=255) cctccCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCt > 1:2286424/1‑91 (MQ=255) cctccCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCt > 1:2283641/1‑91 (MQ=255) cccTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACg > 1:1118177/1‑91 (MQ=255) ccTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGt > 1:2804104/1‑91 (MQ=255) aaaaaaCTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTa < 1:532621/91‑1 (MQ=255) aaaaCTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAAc > 1:1821687/1‑91 (MQ=255) aaaaCTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATAATAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAAc > 1:3283991/1‑91 (MQ=255) aaCTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCa < 1:3701597/91‑1 (MQ=255) actTCCAACATGAAACTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAAAAACTACTTTCCTACGTTGGTACTAACCAAATc > 1:3541032/1‑91 (MQ=255) ctTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTCGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCa > 1:3596367/1‑91 (MQ=255) ttCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAg < 1:153575/91‑1 (MQ=255) ttCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAg < 1:973808/91‑1 (MQ=255) ttCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAg > 1:3518741/1‑91 (MQ=255) ttCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAg < 1:2709935/91‑1 (MQ=255) ccAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAGGt > 1:2191278/1‑91 (MQ=255) ccAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAGGt > 1:2191480/1‑91 (MQ=255) ccAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAGGt < 1:3992504/91‑1 (MQ=255) ccAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAGGt < 1:3992303/91‑1 (MQ=255) aaCATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAGGTCa < 1:677079/91‑1 (MQ=255) aaCATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAGGTCa < 1:3096647/91‑1 (MQ=255) aTGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAGGTCATaa < 1:1800297/91‑1 (MQ=255) aTGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAGGTCATaa < 1:2788754/91‑1 (MQ=255) gAAAGTAGTTattgaagtgatggggctagtatagcaacattgccatcaaactactttcatgttggaagtagtttttttatttagggaggat < 1:2470768‑M1/91‑82 (MQ=255) gAAAGTAGTTattgaagtgatggggctagtatagcaacattgccatcaaactactttcatgttggaagtagtttttttatttagggaggat > 1:117652‑M1/1‑10 (MQ=255) aaaGTAGTTattgaagtgatggggctagtatagcaacattgccatcaaactactttcatgttggaagtagtttttttatttagggaggatt < 1:97109‑M1/91‑83 (MQ=255) aaaGTAGTTattgaagtgatggggctagtatagcaacattgccatcaaactactttcatgttggaagtagtttttttatttagggaggatt > 1:2518997‑M1/1‑9 (MQ=255) AAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAGGTCATAAggg > 1:2090513‑M1/1‑91 (MQ=255) AAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAGGTCATAAggg > 1:2090176‑M1/1‑91 (MQ=255) aaGTAGTTattgaagtgatggggctagtatagcaacattgccatcaaactactttcatgttggaagtagtttttttatttagggaggattt > 1:116793‑M1/1‑8 (MQ=255) aaGTAGTTattgaagtgatggggctagtatagcaacattgccatcaaactactttcatgttggaagtagtttttttatttagggaggattt < 1:942676‑M1/91‑84 (MQ=255) agtagtTattgaagtgatggggctagtatagcaacattgccatcaaactactttcatgttggaagtagtttttttatttagggaggatttt > 1:768279‑M1/1‑7 (MQ=255) GTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAGGTCATAAGGGTCt < 1:3830049‑M1/91‑1 (MQ=255) GTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAGGTCATAAGGGTCt > 1:394909‑M1/1‑91 (MQ=255) GTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAGGTCATAAGGGTCt < 1:3829177‑M1/91‑1 (MQ=255) tagtTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATaactactttcatgttggaagtagtttttttatttagggaggatttttt < 1:563480‑M2/91‑49 (MQ=255) agtTattgaagtgatggggctagtatagcaacattgccatcaaactactttcatgttggaagtagtttttttatttagggaggatttttta > 1:847035‑M1/1‑4 (MQ=255) agtTattgaagtgatggggctagtatagcaacattgccatcaaactactttcatgttggaagtagtttttttatttagggaggatttttta > 1:847076‑M1/1‑4 (MQ=255) agtTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATaactactttcatgttggaagtagtttttttatttagggaggatttttta < 1:1895553‑M2/91‑50 (MQ=255) AGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAGGTCATAAGGGTCTGa < 1:3745571‑M1/91‑1 (MQ=255) gtTattgaagtgatggggctagtatagcaacattgccatcaaactactttcatgttggaagtagtttttttatttagggaggattttttac > 1:3378590‑M1/1‑3 (MQ=255) GTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAGGTCATAAGGGTCTGaa < 1:1761608‑M1/91‑1 (MQ=255) tattgaagtgatggggctagtatagcaacattgccatcaaactactttcatgttggaagtagtttttttatttagggaggattttttacaa < 1:3094346‑M1/91‑91 (MQ=255) tattgaagtgatggggctagtatagcaacattgccatcaaactactttcatgttggaagtagtttttttatttagggaggattttttacaa < 1:3160540‑M1/91‑91 (MQ=255) TTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAGGTCATAAGGGTCTGAACa < 1:3896336‑M1/91‑1 (MQ=255) TTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTCTCCTACGTTGGTACTAACCAAATCAGGTCATAAGGGTCTGAACa < 1:3293842‑M1/91‑1 (MQ=255) | TTGGCTTTGCAGCTTGGTACAATTTTTGTGAAAATTCCATTGTAAAAAATCCTCCCTAAATAAAAAAACTACTTCCAACATGAAAGTAGTTTGATGGCAATGTTGCTATACTAGCCCCATCACTTCAATAACTACTTTCCTACGTTGGTACTAACCAAATCAGGTCATAAGGGTCTGAACA > USA300TCH1516_ALE/2215669‑2215849 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |