| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2218228 | 63 (0.640) | 14 (0.180) | 9/124 | NT | 19.5% | intergenic (+21/+38) | USA300HOU_RS11330/fabZ | hypothetical protein/3‑hydroxyacyl‑[acyl‑carrier‑protein] dehydratase FabZ |
| ? | USA300TCH1516_ALE | = 2218242 | 67 (0.880) | intergenic (+35/+24) | USA300HOU_RS11330/fabZ | hypothetical protein/3‑hydroxyacyl‑[acyl‑carrier‑protein] dehydratase FabZ | |||||
Only 100 of 165 total aligned reads displayed.
ATTAAAAAAATCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGAC > USA300TCH1516_ALE/2218138‑2218318 | aTTAAAAAAATCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATT > 1:2984635‑M1/1‑91 (MQ=255)aTTAAAAAAATCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATT > 1:707076‑M1/1‑91 (MQ=255) ttAAAAAAATCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTa > 1:1041073/1‑91 (MQ=255) aaaaaaaTCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATg > 1:719405/1‑91 (MQ=255) aaaaaTCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGcc < 1:2317042/91‑1 (MQ=255) aaaaTCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCa < 1:1585914/91‑1 (MQ=255) tttAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACAtt < 1:3704823/91‑1 (MQ=255) ttAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTa < 1:26868/91‑1 (MQ=255) atggtcaacttgcttgtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACAt > 1:2893846‑M1/62‑91 (MQ=255) gtcaacttgcttgtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATTaa > 1:3921068‑M1/59‑91 (MQ=255) aTCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAaat < 1:2145599‑M2/91‑4 (MQ=255) aTCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAaat < 1:2145692‑M2/91‑4 (MQ=255) ggtcaacttgcttgtagttgtgaacttacatttgcaattcaagatgtaaaataaaa‑‑‑‑AACATTCAAAGATTATGCCAACACATTAAATCttt > 1:1890866‑M1/57‑91 (MQ=255) aaTGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTtaatgtgttggcataatcttt < 1:2831146‑M1/91‑22 (MQ=255) atgatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTtaatgtgttggcataatctttg < 1:819242‑M1/91‑23 (MQ=255) atgatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTtaatgtgttggcataatctttg < 1:403573‑M1/91‑23 (MQ=255) atgatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTtaatgtgttggcataatctttg < 1:1279755‑M1/91‑23 (MQ=255) atgatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttg < 1:384029‑M2/91‑9 (MQ=255) tgatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttga > 1:252941‑M2/1‑82 (MQ=255) tgatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttga > 1:394438‑M2/1‑82 (MQ=255) tgatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttga < 1:2737733‑M2/91‑10 (MQ=255) tgatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttga < 1:2737051‑M2/91‑10 (MQ=255) gatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTtaatgtgttggcataatctttgaa < 1:1790052‑M1/91‑25 (MQ=255) tgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatg > 1:3832106‑M2/1‑79 (MQ=255) gCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgt < 1:2536868‑M2/91‑14 (MQ=255) cAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgtt < 1:4149654‑M2/91‑15 (MQ=255) cAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTACGCCAACACATTAaatctttgaatgtt > 1:1096513‑M2/1‑77 (MQ=255) aGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTtaatgtgttggcataatctttgaatgttt < 1:3930425‑M1/91‑30 (MQ=255) tagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑tt > 1:3878666‑M1/46‑91 (MQ=255) gTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTtaatgtgttggcataatctttgaatgtttt < 1:2143572‑M1/91‑31 (MQ=255) aaCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑g < 1:1196149/91‑1 (MQ=255) cAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑Gttt > 1:10896/1‑91 (MQ=255) aaaGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑Gtttt < 1:784389/91‑1 (MQ=255) aaGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑Gtttta < 1:4074571/91‑1 (MQ=255) aGTTAAAGGATGAAAAATTAGAAGAGTAAAACAAAAAAAACATTCAAAGATTtaatgtgttggcataatctttgaatgttttttattttac < 1:3935111‑M1/91‑40 (MQ=255) ttAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑Gttttattt < 1:2781949/91‑1 (MQ=255) aaaGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑Gttttatttta > 1:3681011/1‑91 (MQ=255) aaaGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑Gttttatttta > 1:36172/1‑91 (MQ=255) aaGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTAc > 1:2490068/1‑91 (MQ=255) aGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACa > 1:1111216/1‑91 (MQ=255) aGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACa > 1:1330705/1‑91 (MQ=255) aGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACa < 1:3481325/91‑1 (MQ=255) ggATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACAt > 1:791359/1‑91 (MQ=255) aTGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCt < 1:3069990/91‑1 (MQ=255) aTGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCt > 1:277658/1‑91 (MQ=255) tGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTT‑GTTTTATTTTACATCt < 1:654591/91‑1 (MQ=255) tGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCtt > 1:1923551/1‑91 (MQ=255) gAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTg < 1:2057441/91‑1 (MQ=255) aaaaTTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGaa > 1:1373546/1‑91 (MQ=255) aaaaTTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGaa > 1:2257680/1‑91 (MQ=255) aaaTTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAAt < 1:2111611/91‑1 (MQ=255) aaaTTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAAt < 1:3362248/91‑1 (MQ=255) aaaTTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAAt < 1:184851/91‑1 (MQ=255) aTTAGAAGAGTAAA‑‑GTAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATT‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTg < 1:3741941/91‑1 (MQ=255) agaagaGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCaa < 1:1684207/91‑1 (MQ=255) gaagaGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCaaa > 1:708666/1‑91 (MQ=255) aagaGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAAt < 1:17845/91‑1 (MQ=255) agagTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATg < 1:1492870/91‑1 (MQ=255) agagTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATg < 1:596532/91‑1 (MQ=255) agTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgttttttattttactcttctaatttttcatcctttaactt < 1:168995‑M2/91‑52 (MQ=255) agTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTa < 1:530864/91‑1 (MQ=255) gTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgttttttttgttttactcttctaatttttcatcctttaact < 1:3935111‑M2/91‑53 (MQ=255) aaa‑‑ataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGt < 1:193494/91‑1 (MQ=255) acagaaaaaacattCAAAGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggt < 1:3349749‑M1/87‑70 (MQ=255) ataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑‑‑TTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTcaca > 1:2632481/1‑91 (MQ=255) AAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTTCATCTTGAATTGCATATGTAAgttcatta < 1:2711867‑M1/91‑4 (MQ=255) aaaaCATTCAAAGATTATGCCAACACATTAaatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagac < 1:2143572‑M2/91‑62 (MQ=255) aaaCATTCAAAGATTATGCCAACACATTAaatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagact < 1:773362‑M2/91‑63 (MQ=255) aaCATTCAAAGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactg < 1:4149654‑M1/91‑78 (MQ=255) aaCATTCAAAGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactg > 1:632936‑M1/1‑14 (MQ=255) AACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTa > 1:608279‑M1/1‑91 (MQ=255) cATTCAAAGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgca > 1:3832106‑M1/1‑12 (MQ=255) cATTCAAAGATTATGCCAACACATTAaatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgca < 1:431852‑M2/91‑66 (MQ=255) aTTCAAAGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcat > 1:2485771‑M1/1‑11 (MQ=255) aTTCAAAGATTATGCCAACACATTAaatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcat < 1:965066‑M2/91‑67 (MQ=255) ttCAAAGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatc > 1:4084720‑M1/1‑10 (MQ=255) ttCAAAGATTATGCCAACACATTAaatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatc < 1:1451782‑M2/91‑68 (MQ=255) TTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaag < 1:2333064‑M1/91‑1 (MQ=255) TTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaag < 1:2333751‑M1/91‑1 (MQ=255) tCAAAGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatca > 1:252362‑M1/1‑9 (MQ=255) tCAAAGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatca > 1:252941‑M1/1‑9 (MQ=255) tCAAAGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatca < 1:2737051‑M1/91‑83 (MQ=255) cAAAGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatcat > 1:1740489‑M1/1‑8 (MQ=255) cAAAGATTATGCCAACACATTAaatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatcat < 1:819242‑M2/91‑70 (MQ=255) cAAAGATTATGCCAACACATTAaatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatcat < 1:1279755‑M2/91‑70 (MQ=255) cAAAGATTATGCCAACACATTAaatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatcat < 1:1160347‑M2/91‑70 (MQ=255) CAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagca > 1:330543‑M1/1‑91 (MQ=255) aaaGATTATGCCAACACATTAaatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatcatt < 1:2831146‑M2/91‑71 (MQ=255) AAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagcaa > 1:2055395‑M1/1‑91 (MQ=255) AAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagcaag < 1:1570775‑M1/91‑1 (MQ=255) AAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagcaag < 1:13734‑M1/91‑1 (MQ=255) aGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatcattcg > 1:1249835‑M1/1‑5 (MQ=255) GATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 1:1611906‑M1/1‑91 (MQ=255) GATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 1:1611896‑M1/1‑91 (MQ=255) GATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 1:3965371‑M1/1‑91 (MQ=255) GATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 1:3963111‑M1/1‑91 (MQ=255) aTTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatcattcgat < 1:1237290‑M1/91‑89 (MQ=255) ATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTT‑‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGa > 1:2774453‑M1/1‑91 (MQ=255) TATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGa < 1:561424‑M1/91‑1 (MQ=255) TATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTCGAc < 1:3216667‑M1/91‑1 (MQ=255) | ATTAAAAAAATCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAA‑‑ATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGAC > USA300TCH1516_ALE/2218138‑2218318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |